RNA–Protein interactions for RNA: ENST00000367255.9

SYNE1-207, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SYNE1, Length 27,748 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-207ENST00000367255 C9J4A7 227 aa3.57□□□□□ -1.84
SYNE1-207ENST00000367255 TRBC1P01850 177 aa3.57□□□□□ -1.84
SYNE1-207ENST00000367255 UNGP13051 313 aaPredicted RBP3.57□□□□□ -1.84
SYNE1-207ENST00000367255 OR3A3P47888 321 aa3.57□□□□□ -1.84
SYNE1-207ENST00000367255 SUB1P53999 127 aaKnown RBP eCLIP3.57□□□□□ -1.84
SYNE1-207ENST00000367255 GRB14Q14449 540 aa3.57□□□□□ -1.84
SYNE1-207ENST00000367255 GTF2H5Q6ZYL4 71 aa3.57□□□□□ -1.84
SYNE1-207ENST00000367255 ABHD11Q8NFV4 315 aa3.57□□□□□ -1.84
SYNE1-207ENST00000367255 COL26A1Q96A83 441 aa3.57□□□□□ -1.84
SYNE1-207ENST00000367255 GAS2L1Q99501 681 aaPredicted RBP3.57□□□□□ -1.84
SYNE1-207ENST00000367255 AKIRIN1Q9H9L7 192 aaPredicted RBP3.57□□□□□ -1.84
SYNE1-207ENST00000367255 TMEM242Q9NWH2 141 aa3.57□□□□□ -1.84
SYNE1-207ENST00000367255 A0A0B4J2A0 478 aa3.57□□□□□ -1.84
SYNE1-207ENST00000367255 RAD51DO75771 328 aa3.57□□□□□ -1.84
SYNE1-207ENST00000367255 GGT1P19440 569 aa3.57□□□□□ -1.84
SYNE1-207ENST00000367255 FAM74A1Q5RGS3 127 aa3.57□□□□□ -1.84
SYNE1-207ENST00000367255 NXPE1Q8N323 547 aa3.57□□□□□ -1.84
SYNE1-207ENST00000367255 SLC5A8Q8N695 610 aa3.57□□□□□ -1.84
SYNE1-207ENST00000367255 PPCDCQ96CD2 204 aa3.57□□□□□ -1.84
SYNE1-207ENST00000367255 C19orf24Q9BVV8 132 aa3.57□□□□□ -1.84
SYNE1-207ENST00000367255 ERVK-5Q9HDB9 667 aa3.57□□□□□ -1.84
SYNE1-207ENST00000367255 SHPKQ9UHJ6 478 aa3.57□□□□□ -1.84
SYNE1-207ENST00000367255 PCDHB9Q9Y5E1 797 aa3.57□□□□□ -1.84
SYNE1-207ENST00000367255 TRAV1-2A0A0B4J238 106 aa3.57□□□□□ -1.84
SYNE1-207ENST00000367255 XKRY2A2RUG3 117 aa3.57□□□□□ -1.84
SYNE1-207ENST00000367255 H7BY64 318 aa3.57□□□□□ -1.84
SYNE1-207ENST00000367255 B4GAT1O43505 415 aa3.57□□□□□ -1.84
SYNE1-207ENST00000367255 CTSHP09668 335 aa3.57□□□□□ -1.84
SYNE1-207ENST00000367255 FABP4P15090 132 aa3.57□□□□□ -1.84
SYNE1-207ENST00000367255 MTHFRP42898 656 aa3.57□□□□□ -1.84
SYNE1-207ENST00000367255 SMAGPQ0VAQ4 97 aa3.57□□□□□ -1.84
SYNE1-207ENST00000367255 SPRED3Q2MJR0 410 aa3.57□□□□□ -1.84
SYNE1-207ENST00000367255 DTWD2Q8NBA8 298 aa3.57□□□□□ -1.84
SYNE1-207ENST00000367255 MARC2Q969Z3 335 aa3.57□□□□□ -1.84
SYNE1-207ENST00000367255 PRAP1Q96NZ9 151 aa3.57□□□□□ -1.84
SYNE1-207ENST00000367255 NOCTQ9UK39 431 aaKnown RBP3.57□□□□□ -1.84
SYNE1-207ENST00000367255 UQCRC2P22695 453 aa3.57□□□□□ -1.84
SYNE1-207ENST00000367255 MAT1AQ00266 395 aaKnown RBP3.57□□□□□ -1.84
SYNE1-207ENST00000367255 GALEQ14376 348 aa3.57□□□□□ -1.84
SYNE1-207ENST00000367255 MFSD10Q14728 455 aa3.57□□□□□ -1.84
SYNE1-207ENST00000367255 MBLAC2Q68D91 279 aa3.57□□□□□ -1.84
SYNE1-207ENST00000367255 ZNF425Q6IV72 752 aa3.57□□□□□ -1.84
SYNE1-207ENST00000367255 ARL9Q6T311 187 aa3.57□□□□□ -1.84
SYNE1-207ENST00000367255 ZNF765Q7L2R6 523 aa3.57□□□□□ -1.84
SYNE1-207ENST00000367255 FIBCD1Q8N539 461 aa3.57□□□□□ -1.84
SYNE1-207ENST00000367255 TIMM29Q9BSF4 260 aa3.57□□□□□ -1.84
SYNE1-207ENST00000367255 ALOXE3Q9BYJ1 711 aa3.57□□□□□ -1.84
SYNE1-207ENST00000367255 RASD1Q9Y272 281 aa3.57□□□□□ -1.84
SYNE1-207ENST00000367255 LOC285095A0A1B0GVY8 99 aa3.57□□□□□ -1.84
SYNE1-207ENST00000367255 CLDN4O14493 209 aa3.57□□□□□ -1.84
SYNE1-207ENST00000367255 TATDN3Q17R31 274 aa3.57□□□□□ -1.84
SYNE1-207ENST00000367255 SOHLH1Q5JUK2 328 aa3.57□□□□□ -1.84
SYNE1-207ENST00000367255 SDHAF4Q5VUM1 108 aa3.57□□□□□ -1.84
SYNE1-207ENST00000367255 SZRD1Q7Z422 152 aa3.57□□□□□ -1.84
SYNE1-207ENST00000367255 PYROXD2Q8N2H3 581 aa3.57□□□□□ -1.84
SYNE1-207ENST00000367255 C22orf15Q8WYQ4 148 aa3.57□□□□□ -1.84
SYNE1-207ENST00000367255 COPS8Q99627 209 aa3.57□□□□□ -1.84
SYNE1-207ENST00000367255 ZNF224Q9NZL3 707 aa3.57□□□□□ -1.84
SYNE1-207ENST00000367255 PRODH2Q9UF12 536 aa3.57□□□□□ -1.84
SYNE1-207ENST00000367255 HS6ST3Q8IZP7 471 aa3.57□□□□□ -1.84
SYNE1-207ENST00000367255 IRF2BPLQ9H1B7 796 aa3.57□□□□□ -1.84
SYNE1-207ENST00000367255 FBXW11Q9UKB1 542 aa3.57□□□□□ -1.84
SYNE1-207ENST00000367255 I3L521 148 aa3.57□□□□□ -1.84
SYNE1-207ENST00000367255 M0QYG6 137 aa3.57□□□□□ -1.84
SYNE1-207ENST00000367255 PLK5Q496M5 336 aa3.57□□□□□ -1.84
SYNE1-207ENST00000367255 KTI12Q96EK9 354 aaPredicted RBP3.57□□□□□ -1.84
SYNE1-207ENST00000367255 MEGF10Q96KG7 1140 aa3.57□□□□□ -1.84
SYNE1-207ENST00000367255 ZFYVE1Q9HBF4 777 aa3.57□□□□□ -1.84
SYNE1-207ENST00000367255 IL37Q9NZH6 218 aa3.57□□□□□ -1.84
SYNE1-207ENST00000367255 FAM96BQ9Y3D0 163 aa3.57□□□□□ -1.84
SYNE1-207ENST00000367255 WASHC1A8K0Z3 465 aa3.57□□□□□ -1.84
SYNE1-207ENST00000367255 SERPINE3A8MV23 424 aa3.57□□□□□ -1.84
SYNE1-207ENST00000367255 M0R3H8 397 aa3.57□□□□□ -1.84
SYNE1-207ENST00000367255 HTRA2O43464 458 aaPredicted RBP3.57□□□□□ -1.84
SYNE1-207ENST00000367255 KDELR3O43731 214 aa3.57□□□□□ -1.84
SYNE1-207ENST00000367255 SEMA7AO75326 666 aa3.57□□□□□ -1.84
SYNE1-207ENST00000367255 SLC25A12O75746 678 aa3.57□□□□□ -1.84
SYNE1-207ENST00000367255 OMGP23515 440 aa3.57□□□□□ -1.84
SYNE1-207ENST00000367255 MAP3K8P41279 467 aa3.57□□□□□ -1.84
SYNE1-207ENST00000367255 RPS13P62277 151 aaKnown RBP3.57□□□□□ -1.84
SYNE1-207ENST00000367255 ILKQ13418 452 aa3.57□□□□□ -1.84
SYNE1-207ENST00000367255 MRPL54Q6P161 138 aaKnown RBP3.57□□□□□ -1.84
SYNE1-207ENST00000367255 FAM196AQ6ZSG2 479 aa3.57□□□□□ -1.84
SYNE1-207ENST00000367255 OR4L1Q8NH43 312 aa3.57□□□□□ -1.84
SYNE1-207ENST00000367255 TMEM234Q8WY98 164 aa3.57□□□□□ -1.84
SYNE1-207ENST00000367255 CNN2Q99439 309 aaKnown RBP3.57□□□□□ -1.84
SYNE1-207ENST00000367255 POLR1AO95602 1720 aaPredicted RBP3.56□□□□□ -1.84
SYNE1-207ENST00000367255 ZNF28P17035 718 aa3.56□□□□□ -1.84
SYNE1-207ENST00000367255 ZNF460Q14592 562 aa3.56□□□□□ -1.84
SYNE1-207ENST00000367255 FFAR4Q5NUL3 377 aa3.56□□□□□ -1.84
SYNE1-207ENST00000367255 SAMD13Q5VXD3 122 aa3.56□□□□□ -1.84
SYNE1-207ENST00000367255 BTN2A2Q8WVV5 523 aa3.56□□□□□ -1.84
SYNE1-207ENST00000367255 PMEPA1Q969W9 287 aa3.56□□□□□ -1.84
SYNE1-207ENST00000367255 SMIM12Q96EX1 92 aa3.56□□□□□ -1.84
SYNE1-207ENST00000367255 HRH4Q9H3N8 390 aa3.56□□□□□ -1.84
SYNE1-207ENST00000367255 NDUFB11Q9NX14 153 aa3.56□□□□□ -1.84
SYNE1-207ENST00000367255 SMAD9O15198 467 aaKnown RBP3.56□□□□□ -1.84
SYNE1-207ENST00000367255 PCSK6P29122 969 aa3.56□□□□□ -1.84
SYNE1-207ENST00000367255 TECPR1Q7Z6L1 1165 aa3.56□□□□□ -1.84
SYNE1-207ENST00000367255 MKKSQ9NPJ1 570 aaPredicted RBP3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 215.3 ms