RNA–Protein interactions for RNA: ENST00000363313.1

RNU6-238P-201, Transcript of RNA, U6 small nuclear 238, pseudogene, humanhuman

BASIC

Gene RNU6-238P, Length 106 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-238P-201ENST00000363313 BRINP3Q76B58 766 aa0.54□□□□□ -2.32
RNU6-238P-201ENST00000363313 ASRGL1Q7L266 308 aa0.54□□□□□ -2.32
RNU6-238P-201ENST00000363313 C6orf120Q7Z4R8 191 aa0.54□□□□□ -2.32
RNU6-238P-201ENST00000363313 SPATA21Q7Z572 469 aa0.54□□□□□ -2.32
RNU6-238P-201ENST00000363313 HSD11B1LQ7Z5J1 315 aa0.54□□□□□ -2.32
RNU6-238P-201ENST00000363313 CCAR2Q8N163 923 aaKnown RBP0.54□□□□□ -2.32
RNU6-238P-201ENST00000363313 TEX19Q8NA77 164 aa0.54□□□□□ -2.32
RNU6-238P-201ENST00000363313 SKA1Q96BD8 255 aa0.54□□□□□ -2.32
RNU6-238P-201ENST00000363313 ARHGDIGQ99819 225 aa0.54□□□□□ -2.32
RNU6-238P-201ENST00000363313 NRIP2Q9BQI9 281 aa0.54□□□□□ -2.32
RNU6-238P-201ENST00000363313 NAA11Q9BSU3 229 aaPredicted RBP0.54□□□□□ -2.32
RNU6-238P-201ENST00000363313 LSG1Q9H089 658 aaKnown RBP0.54□□□□□ -2.32
RNU6-238P-201ENST00000363313 GPR132Q9UNW8 380 aa0.54□□□□□ -2.32
RNU6-238P-201ENST00000363313 ITM2BQ9Y287 266 aa0.54□□□□□ -2.32
RNU6-238P-201ENST00000363313 L3MBTL1Q9Y468 752 aa0.54□□□□□ -2.32
RNU6-238P-201ENST00000363313 YTHDF2Q9Y5A9 579 aaKnown RBP0.54□□□□□ -2.32
RNU6-238P-201ENST00000363313 SCN2AQ99250 2005 aa0.54□□□□□ -2.32
RNU6-238P-201ENST00000363313 A0A087X0K7 114 aa0.53□□□□□ -2.32
RNU6-238P-201ENST00000363313 C19orf81C9J6K1 198 aa0.53□□□□□ -2.32
RNU6-238P-201ENST00000363313 FAM86B1E9PN63 330 aa0.53□□□□□ -2.32
RNU6-238P-201ENST00000363313 RAMP1O60894 148 aa0.53□□□□□ -2.32
RNU6-238P-201ENST00000363313 CTDNEP1O95476 244 aa0.53□□□□□ -2.32
RNU6-238P-201ENST00000363313 TXNDC12O95881 172 aa0.53□□□□□ -2.32
RNU6-238P-201ENST00000363313 PCCBP05166 539 aa0.53□□□□□ -2.32
RNU6-238P-201ENST00000363313 CCDC175P0C221 793 aa0.53□□□□□ -2.32
RNU6-238P-201ENST00000363313 FAM86B2P0C5J1 330 aa0.53□□□□□ -2.32
RNU6-238P-201ENST00000363313 HPDP32754 393 aaPredicted RBP0.53□□□□□ -2.32
RNU6-238P-201ENST00000363313 TKTL1P51854 596 aa0.53□□□□□ -2.32
RNU6-238P-201ENST00000363313 FOLH1Q04609 750 aa0.53□□□□□ -2.32
RNU6-238P-201ENST00000363313 KLF5Q13887 457 aaPredicted RBP0.53□□□□□ -2.32
RNU6-238P-201ENST00000363313 ACKR1Q16570 336 aa0.53□□□□□ -2.32
RNU6-238P-201ENST00000363313 CYP51A1Q16850 503 aa0.53□□□□□ -2.32
RNU6-238P-201ENST00000363313 CCDC57Q2TAC2 916 aa0.53□□□□□ -2.32
RNU6-238P-201ENST00000363313 HKDC1Q2TB90 917 aa0.53□□□□□ -2.32
RNU6-238P-201ENST00000363313 MPPE1Q53F39 396 aa0.53□□□□□ -2.32
RNU6-238P-201ENST00000363313 RABGAP1LQ5R372 815 aa0.53□□□□□ -2.32
RNU6-238P-201ENST00000363313 CASC10Q5T4H9 136 aa0.53□□□□□ -2.32
RNU6-238P-201ENST00000363313 GCNT2Q8N0V5 402 aa0.53□□□□□ -2.32
RNU6-238P-201ENST00000363313 OR6M1Q8NGM8 313 aa0.53□□□□□ -2.32
RNU6-238P-201ENST00000363313 OR2A12Q8NGT7 310 aa0.53□□□□□ -2.32
RNU6-238P-201ENST00000363313 GIMAP1Q8WWP7 306 aa0.53□□□□□ -2.32
RNU6-238P-201ENST00000363313 OR1E3Q8WZA6 343 aa0.53□□□□□ -2.32
RNU6-238P-201ENST00000363313 RMDN1Q96DB5 314 aa0.53□□□□□ -2.32
RNU6-238P-201ENST00000363313 DNAJA3Q96EY1 480 aa0.53□□□□□ -2.32
RNU6-238P-201ENST00000363313 CEP170P1Q96L14 293 aa0.53□□□□□ -2.32
RNU6-238P-201ENST00000363313 OR2M2Q96R28 347 aa0.53□□□□□ -2.32
RNU6-238P-201ENST00000363313 IFI27L2Q9H2X8 130 aa0.53□□□□□ -2.32
RNU6-238P-201ENST00000363313 SAMSN1Q9NSI8 373 aaKnown RBP0.53□□□□□ -2.32
RNU6-238P-201ENST00000363313 OR1A1Q9P1Q5 309 aa0.53□□□□□ -2.32
RNU6-238P-201ENST00000363313 GIMAP2Q9UG22 337 aa0.53□□□□□ -2.32
RNU6-238P-201ENST00000363313 ANGPTL2Q9UKU9 493 aa0.53□□□□□ -2.32
RNU6-238P-201ENST00000363313 DHRS7Q9Y394 339 aa0.53□□□□□ -2.32
RNU6-238P-201ENST00000363313 NEUROG3Q9Y4Z2 214 aa0.53□□□□□ -2.32
RNU6-238P-201ENST00000363313 MUC5ACP98088 5654 aa0.53□□□□□ -2.32
RNU6-238P-201ENST00000363313 IGLV1-50A0A075B6I6 118 aa0.52□□□□□ -2.33
RNU6-238P-201ENST00000363313 ARPC4-TTLL3A0A0A6YYG9 625 aa0.52□□□□□ -2.33
RNU6-238P-201ENST00000363313 HTR3EA5X5Y0 456 aa0.52□□□□□ -2.33
RNU6-238P-201ENST00000363313 TUBAL3A6NHL2 446 aa0.52□□□□□ -2.33
RNU6-238P-201ENST00000363313 NPIPA2E9PIF3 369 aa0.52□□□□□ -2.33
RNU6-238P-201ENST00000363313 GFYI3L273 518 aa0.52□□□□□ -2.33
RNU6-238P-201ENST00000363313 B4GALT5O43286 388 aa0.52□□□□□ -2.33
RNU6-238P-201ENST00000363313 KLF8O95600 359 aaPredicted RBP0.52□□□□□ -2.33
RNU6-238P-201ENST00000363313 ECDO95905 644 aaPredicted RBP0.52□□□□□ -2.33
RNU6-238P-201ENST00000363313 THRBP10828 461 aa0.52□□□□□ -2.33
RNU6-238P-201ENST00000363313 CRISP2P16562 243 aa0.52□□□□□ -2.33
RNU6-238P-201ENST00000363313 PTBP1P26599 531 aaKnown RBP eCLIP0.52□□□□□ -2.33
RNU6-238P-201ENST00000363313 KIR2DS2P43631 304 aa0.52□□□□□ -2.33
RNU6-238P-201ENST00000363313 CACNG7P62955 275 aa0.52□□□□□ -2.33
RNU6-238P-201ENST00000363313 MEF2CQ06413 473 aaPredicted RBP0.52□□□□□ -2.33
RNU6-238P-201ENST00000363313 BNIP1Q12981 228 aa0.52□□□□□ -2.33
RNU6-238P-201ENST00000363313 TRADDQ15628 312 aa0.52□□□□□ -2.33
RNU6-238P-201ENST00000363313 NSDHLQ15738 373 aa0.52□□□□□ -2.33
RNU6-238P-201ENST00000363313 ZNF57Q68EA5 555 aaPredicted RBP0.52□□□□□ -2.33
RNU6-238P-201ENST00000363313 COX15Q7KZN9 410 aa0.52□□□□□ -2.33
RNU6-238P-201ENST00000363313 ARMCX2Q7L311 632 aa0.52□□□□□ -2.33
RNU6-238P-201ENST00000363313 TSEN54Q7Z6J9 526 aaKnown RBP0.52□□□□□ -2.33
RNU6-238P-201ENST00000363313 TMEM252Q8N6L7 170 aa0.52□□□□□ -2.33
RNU6-238P-201ENST00000363313 CYB561D1Q8N8Q1 229 aa0.52□□□□□ -2.33
RNU6-238P-201ENST00000363313 UCN3Q969E3 161 aa0.52□□□□□ -2.33
RNU6-238P-201ENST00000363313 NPAS2Q99743 824 aa0.52□□□□□ -2.33
RNU6-238P-201ENST00000363313 SLC26A1Q9H2B4 701 aa0.52□□□□□ -2.33
RNU6-238P-201ENST00000363313 SOHLH2Q9NX45 425 aa0.52□□□□□ -2.33
RNU6-238P-201ENST00000363313 GDAP2Q9NXN4 497 aa0.52□□□□□ -2.33
RNU6-238P-201ENST00000363313 WDR45Q9Y484 360 aa0.52□□□□□ -2.33
RNU6-238P-201ENST00000363313 URADA6NGE7 173 aa0.51□□□□□ -2.33
RNU6-238P-201ENST00000363313 LAD1O00515 517 aa0.51□□□□□ -2.33
RNU6-238P-201ENST00000363313 GRIN2DO15399 1336 aa0.51□□□□□ -2.33
RNU6-238P-201ENST00000363313 RANBP6O60518 1105 aaKnown RBP0.51□□□□□ -2.33
RNU6-238P-201ENST00000363313 SELENOFO60613 162 aa0.51□□□□□ -2.33
RNU6-238P-201ENST00000363313 AKR7A3O95154 331 aa0.51□□□□□ -2.33
RNU6-238P-201ENST00000363313 SIX3O95343 332 aaPredicted RBP0.51□□□□□ -2.33
RNU6-238P-201ENST00000363313 OR8U8P0C7N1 319 aa0.51□□□□□ -2.33
RNU6-238P-201ENST00000363313 TPBGLP0DKB5 382 aa0.51□□□□□ -2.33
RNU6-238P-201ENST00000363313 IL11P20809 199 aa0.51□□□□□ -2.33
RNU6-238P-201ENST00000363313 GDI1P31150 447 aa0.51□□□□□ -2.33
RNU6-238P-201ENST00000363313 TRIM23P36406 574 aa0.51□□□□□ -2.33
RNU6-238P-201ENST00000363313 MRPS11P82912 194 aaKnown RBP0.51□□□□□ -2.33
RNU6-238P-201ENST00000363313 GPAT3Q53EU6 434 aa0.51□□□□□ -2.33
RNU6-238P-201ENST00000363313 PIGGQ5H8A4 983 aa0.51□□□□□ -2.33
RNU6-238P-201ENST00000363313 SPIN3Q5JUX0 258 aa0.51□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms