RNA–Protein interactions for RNA: ENST00000361716.7

VAMP1-201, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best) BASIC

Gene VAMP1, Length 3,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-201ENST00000361716 SOD1P00441 154 aa11.96□□□□□ -0.5
VAMP1-201ENST00000361716 TFPIP10646 304 aa11.96□□□□□ -0.5
VAMP1-201ENST00000361716 AHCYP23526 432 aa11.96□□□□□ -0.5
VAMP1-201ENST00000361716 DGKGP49619 791 aa11.96□□□□□ -0.5
VAMP1-201ENST00000361716 CD276Q5ZPR3 534 aa11.96□□□□□ -0.5
VAMP1-201ENST00000361716 OR5M10Q6IEU7 315 aa11.96□□□□□ -0.5
VAMP1-201ENST00000361716 HAGHLQ6PII5 290 aaPredicted RBP11.96□□□□□ -0.5
VAMP1-201ENST00000361716 CRTC1Q6UUV9 634 aa11.96□□□□□ -0.5
VAMP1-201ENST00000361716 CLRN3Q8NCR9 226 aa11.96□□□□□ -0.5
VAMP1-201ENST00000361716 PTP4A1Q93096 173 aa11.96□□□□□ -0.5
VAMP1-201ENST00000361716 WNT2BQ93097 391 aa11.96□□□□□ -0.5
VAMP1-201ENST00000361716 RNF32Q9H0A6 362 aa11.96□□□□□ -0.5
VAMP1-201ENST00000361716 KCNK12Q9HB15 430 aa11.96□□□□□ -0.5
VAMP1-201ENST00000361716 SLC39A1Q9NY26 324 aa11.96□□□□□ -0.5
VAMP1-201ENST00000361716 ZDHHC3Q9NYG2 299 aa11.96□□□□□ -0.5
VAMP1-201ENST00000361716 LHX3Q9UBR4 397 aa11.96□□□□□ -0.5
VAMP1-201ENST00000361716 CPSF4LA6NMK7 179 aaKnown RBP11.95□□□□□ -0.5
VAMP1-201ENST00000361716 FRS3O43559 492 aa11.95□□□□□ -0.5
VAMP1-201ENST00000361716 KHDRBS3O75525 346 aaKnown RBP11.95□□□□□ -0.5
VAMP1-201ENST00000361716 RP2O75695 350 aa11.95□□□□□ -0.5
VAMP1-201ENST00000361716 LGI1O95970 557 aa11.95□□□□□ -0.5
VAMP1-201ENST00000361716 SNRPBP14678 240 aaKnown RBP11.95□□□□□ -0.5
VAMP1-201ENST00000361716 GABRA5P31644 462 aa11.95□□□□□ -0.5
VAMP1-201ENST00000361716 CD70P32970 193 aa11.95□□□□□ -0.5
VAMP1-201ENST00000361716 BTG1P62324 171 aa11.95□□□□□ -0.5
VAMP1-201ENST00000361716 MC2RQ01718 297 aa11.95□□□□□ -0.5
VAMP1-201ENST00000361716 PLA1AQ53H76 456 aa11.95□□□□□ -0.5
VAMP1-201ENST00000361716 SLC30A6Q6NXT4 461 aa11.95□□□□□ -0.5
VAMP1-201ENST00000361716 MRPL10Q7Z7H8 261 aaKnown RBP11.95□□□□□ -0.5
VAMP1-201ENST00000361716 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.95□□□□□ -0.5
VAMP1-201ENST00000361716 LRRTM4Q86VH4 590 aa11.95□□□□□ -0.5
VAMP1-201ENST00000361716 SMAP2Q8WU79 429 aaPredicted RBP11.95□□□□□ -0.5
VAMP1-201ENST00000361716 ADAT1Q9BUB4 502 aaKnown RBP11.95□□□□□ -0.5
VAMP1-201ENST00000361716 CXXC1Q9P0U4 656 aaPredicted RBP11.95□□□□□ -0.5
VAMP1-201ENST00000361716 KPNA3O00505 521 aaPredicted RBP11.95□□□□□ -0.5
VAMP1-201ENST00000361716 FFAR1O14842 300 aa11.95□□□□□ -0.5
VAMP1-201ENST00000361716 TSPAN6O43657 245 aa11.95□□□□□ -0.5
VAMP1-201ENST00000361716 FMO6PO60774 539 aa11.95□□□□□ -0.5
VAMP1-201ENST00000361716 SLC19A2O60779 497 aa11.95□□□□□ -0.5
VAMP1-201ENST00000361716 CATP04040 527 aaKnown RBP11.95□□□□□ -0.5
VAMP1-201ENST00000361716 MRPL3P09001 348 aaKnown RBP11.95□□□□□ -0.5
VAMP1-201ENST00000361716 FAM157BP0CG42 384 aa11.95□□□□□ -0.5
VAMP1-201ENST00000361716 GIPRP48546 466 aa11.95□□□□□ -0.5
VAMP1-201ENST00000361716 ZCCHC12Q6PEW1 402 aa11.95□□□□□ -0.5
VAMP1-201ENST00000361716 Q6ZTK2 550 aa11.95□□□□□ -0.5
VAMP1-201ENST00000361716 PDZD9Q8IXQ8 264 aa11.95□□□□□ -0.5
VAMP1-201ENST00000361716 WDR48Q8TAF3 677 aa11.95□□□□□ -0.5
VAMP1-201ENST00000361716 SLC7A13Q8TCU3 470 aa11.95□□□□□ -0.5
VAMP1-201ENST00000361716 SCLYQ96I15 445 aa11.95□□□□□ -0.5
VAMP1-201ENST00000361716 RIOK2Q9BVS4 552 aaKnown RBP11.95□□□□□ -0.5
VAMP1-201ENST00000361716 MCOLN1Q9GZU1 580 aa11.95□□□□□ -0.5
VAMP1-201ENST00000361716 ZDHHC4Q9NPG8 344 aa11.95□□□□□ -0.5
VAMP1-201ENST00000361716 LSM7Q9UK45 103 aaKnown RBP11.95□□□□□ -0.5
VAMP1-201ENST00000361716 NUBP2Q9Y5Y2 271 aa11.95□□□□□ -0.5
VAMP1-201ENST00000361716 CSNK1G3Q9Y6M4 447 aa11.95□□□□□ -0.5
VAMP1-201ENST00000361716 TMEM229AB2RXF0 380 aa11.95□□□□□ -0.5
VAMP1-201ENST00000361716 ADAP00813 363 aa11.95□□□□□ -0.5
VAMP1-201ENST00000361716 ACADLP28330 430 aa11.95□□□□□ -0.5
VAMP1-201ENST00000361716 GABRR2P28476 465 aa11.95□□□□□ -0.5
VAMP1-201ENST00000361716 PDHA2P29803 388 aa11.95□□□□□ -0.5
VAMP1-201ENST00000361716 STARP49675 285 aa11.95□□□□□ -0.5
VAMP1-201ENST00000361716 RING1Q06587 406 aa11.95□□□□□ -0.5
VAMP1-201ENST00000361716 HTR4Q13639 388 aa11.95□□□□□ -0.5
VAMP1-201ENST00000361716 ARHGAP15Q53QZ3 475 aa11.95□□□□□ -0.5
VAMP1-201ENST00000361716 CHST14Q8NCH0 376 aa11.95□□□□□ -0.5
VAMP1-201ENST00000361716 OR4K5Q8NGD3 323 aa11.95□□□□□ -0.5
VAMP1-201ENST00000361716 SHARPINQ9H0F6 387 aa11.95□□□□□ -0.5
VAMP1-201ENST00000361716 GULP1Q9UBP9 304 aa11.95□□□□□ -0.5
VAMP1-201ENST00000361716 DYRK1BQ9Y463 629 aa11.95□□□□□ -0.5
VAMP1-201ENST00000361716 PLXNB2O15031 1838 aa11.95□□□□□ -0.5
VAMP1-201ENST00000361716 NYNRINQ9P2P1 1898 aaKnown RBP11.94□□□□□ -0.5
VAMP1-201ENST00000361716 ZC3H12DA2A288 527 aaKnown RBP11.94□□□□□ -0.5
VAMP1-201ENST00000361716 SGK494L7N484 410 aa11.94□□□□□ -0.5
VAMP1-201ENST00000361716 NR2F1P10589 423 aa11.94□□□□□ -0.5
VAMP1-201ENST00000361716 PIPP12273 146 aaPredicted RBP11.94□□□□□ -0.5
VAMP1-201ENST00000361716 ATXN7L3Q14CW9 347 aaPredicted RBP11.94□□□□□ -0.5
VAMP1-201ENST00000361716 HYAL4Q2M3T9 481 aa11.94□□□□□ -0.5
VAMP1-201ENST00000361716 ZXDCQ2QGD7 858 aaPredicted RBP11.94□□□□□ -0.5
VAMP1-201ENST00000361716 NHLRC1Q6VVB1 395 aa11.94□□□□□ -0.5
VAMP1-201ENST00000361716 OR10H4Q8NGA5 316 aa11.94□□□□□ -0.5
VAMP1-201ENST00000361716 CYB5D2Q8WUJ1 264 aa11.94□□□□□ -0.5
VAMP1-201ENST00000361716 ATOH1Q92858 354 aaPredicted RBP11.94□□□□□ -0.5
VAMP1-201ENST00000361716 ZNF707Q96C28 371 aaPredicted RBP11.94□□□□□ -0.5
VAMP1-201ENST00000361716 SAMD11Q96NU1 681 aa11.94□□□□□ -0.5
VAMP1-201ENST00000361716 NRTNQ99748 197 aa11.94□□□□□ -0.5
VAMP1-201ENST00000361716 DPH7Q9BTV6 452 aa11.94□□□□□ -0.5
VAMP1-201ENST00000361716 FAIM2Q9BWQ8 316 aa11.94□□□□□ -0.5
VAMP1-201ENST00000361716 AUNIPQ9H7T9 357 aa11.94□□□□□ -0.5
VAMP1-201ENST00000361716 CREBZFQ9NS37 354 aa11.94□□□□□ -0.5
VAMP1-201ENST00000361716 GPATCH2Q9NW75 528 aa11.94□□□□□ -0.5
VAMP1-201ENST00000361716 POMT2Q9UKY4 750 aa11.94□□□□□ -0.5
VAMP1-201ENST00000361716 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.94□□□□□ -0.5
VAMP1-201ENST00000361716 A0A1B0GVI7 797 aa11.94□□□□□ -0.5
VAMP1-201ENST00000361716 ZNF593O00488 134 aaPredicted RBP11.94□□□□□ -0.5
VAMP1-201ENST00000361716 FZD7O75084 574 aa11.94□□□□□ -0.5
VAMP1-201ENST00000361716 PTHLHP12272 177 aa11.94□□□□□ -0.5
VAMP1-201ENST00000361716 PAICSP22234 425 aaKnown RBP11.94□□□□□ -0.5
VAMP1-201ENST00000361716 ELAVL4P26378 380 aaKnown RBP11.94□□□□□ -0.5
VAMP1-201ENST00000361716 SPIN4Q56A73 249 aa11.94□□□□□ -0.5
VAMP1-201ENST00000361716 MPP7Q5T2T1 576 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms