RNA–Protein interactions for RNA: ENST00000360718.5

SQSTM1-201, Transcript of sequestosome 1, humanhuman

TSL 1 (best) BASIC

Gene SQSTM1, Length 2,253 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-201ENST00000360718 CDH12P55289 794 aa12.31□□□□□ -0.44
SQSTM1-201ENST00000360718 ZNF45Q02386 682 aa12.31□□□□□ -0.44
SQSTM1-201ENST00000360718 ZNF630Q2M218 657 aaPredicted RBP12.31□□□□□ -0.44
SQSTM1-201ENST00000360718 FAM214AQ32MH5 1076 aa12.31□□□□□ -0.44
SQSTM1-201ENST00000360718 GPR135Q8IZ08 494 aa12.31□□□□□ -0.44
SQSTM1-201ENST00000360718 CADM3Q8N126 398 aa12.31□□□□□ -0.44
SQSTM1-201ENST00000360718 LGI4Q8N135 537 aa12.31□□□□□ -0.44
SQSTM1-201ENST00000360718 D2HGDHQ8N465 521 aa12.31□□□□□ -0.44
SQSTM1-201ENST00000360718 OR4K14Q8NGD5 310 aa12.31□□□□□ -0.44
SQSTM1-201ENST00000360718 OR4C15Q8NGM1 316 aa12.31□□□□□ -0.44
SQSTM1-201ENST00000360718 OR9A4Q8NGU2 314 aa12.31□□□□□ -0.44
SQSTM1-201ENST00000360718 OR5AK3PQ8NH89 298 aa12.31□□□□□ -0.44
SQSTM1-201ENST00000360718 IFI44Q8TCB0 444 aa12.31□□□□□ -0.44
SQSTM1-201ENST00000360718 ZNF675Q8TD23 568 aa12.31□□□□□ -0.44
SQSTM1-201ENST00000360718 PROX1Q92786 737 aa12.31□□□□□ -0.44
SQSTM1-201ENST00000360718 C10orf90Q96M02 699 aa12.31□□□□□ -0.44
SQSTM1-201ENST00000360718 SPRTNQ9H040 489 aaPredicted RBP12.31□□□□□ -0.44
SQSTM1-201ENST00000360718 CUL9Q8IWT3 2517 aa12.3□□□□□ -0.44
SQSTM1-201ENST00000360718 SEC16AO15027 2179 aa12.3□□□□□ -0.44
SQSTM1-201ENST00000360718 OTOGLQ3ZCN5 2332 aa12.3□□□□□ -0.44
SQSTM1-201ENST00000360718 TMEM229AB2RXF0 380 aa12.3□□□□□ -0.44
SQSTM1-201ENST00000360718 TMEM150CB9EJG8 249 aa12.3□□□□□ -0.44
SQSTM1-201ENST00000360718 M0R082 166 aa12.3□□□□□ -0.44
SQSTM1-201ENST00000360718 AGRPO00253 132 aa12.3□□□□□ -0.44
SQSTM1-201ENST00000360718 RDH16O75452 317 aa12.3□□□□□ -0.44
SQSTM1-201ENST00000360718 ETFAP13804 333 aa12.3□□□□□ -0.44
SQSTM1-201ENST00000360718 C21orf33P30042 268 aaPredicted RBP12.3□□□□□ -0.44
SQSTM1-201ENST00000360718 PTGER1P34995 402 aa12.3□□□□□ -0.44
SQSTM1-201ENST00000360718 FEN1P39748 380 aaKnown RBP12.3□□□□□ -0.44
SQSTM1-201ENST00000360718 IDH2P48735 452 aaKnown RBP12.3□□□□□ -0.44
SQSTM1-201ENST00000360718 DUSP2Q05923 314 aa12.3□□□□□ -0.44
SQSTM1-201ENST00000360718 KRR1Q13601 381 aaKnown RBP12.3□□□□□ -0.44
SQSTM1-201ENST00000360718 DNASE1L3Q13609 305 aa12.3□□□□□ -0.44
SQSTM1-201ENST00000360718 GPR19Q15760 415 aa12.3□□□□□ -0.44
SQSTM1-201ENST00000360718 ZNF750Q32MQ0 723 aa12.3□□□□□ -0.44
SQSTM1-201ENST00000360718 SUMF1Q8NBK3 374 aa12.3□□□□□ -0.44
SQSTM1-201ENST00000360718 GEMIN6Q8WXD5 167 aaKnown RBP12.3□□□□□ -0.44
SQSTM1-201ENST00000360718 CNRIP1Q96F85 164 aaPredicted RBP12.3□□□□□ -0.44
SQSTM1-201ENST00000360718 SLC41A2Q96JW4 573 aa12.3□□□□□ -0.44
SQSTM1-201ENST00000360718 LRRN3Q9H3W5 708 aa12.3□□□□□ -0.44
SQSTM1-201ENST00000360718 GLIPR2Q9H4G4 154 aa12.3□□□□□ -0.44
SQSTM1-201ENST00000360718 CXorf36Q9H7Y0 433 aa12.3□□□□□ -0.44
SQSTM1-201ENST00000360718 SERTAD3Q9UJW9 196 aa12.3□□□□□ -0.44
SQSTM1-201ENST00000360718 HCN4Q9Y3Q4 1203 aa12.3□□□□□ -0.44
SQSTM1-201ENST00000360718 A0A0A6YYC8 382 aaPredicted RBP12.3□□□□□ -0.44
SQSTM1-201ENST00000360718 AGAP5A6NIR3 686 aa12.3□□□□□ -0.44
SQSTM1-201ENST00000360718 I3L1I5 382 aaPredicted RBP12.3□□□□□ -0.44
SQSTM1-201ENST00000360718 NSA2O95478 260 aaKnown RBP12.3□□□□□ -0.44
SQSTM1-201ENST00000360718 FOLR1P15328 257 aa12.3□□□□□ -0.44
SQSTM1-201ENST00000360718 GADD45AP24522 165 aa12.3□□□□□ -0.44
SQSTM1-201ENST00000360718 GRK6P43250 576 aa12.3□□□□□ -0.44
SQSTM1-201ENST00000360718 RAB38P57729 211 aa12.3□□□□□ -0.44
SQSTM1-201ENST00000360718 CDC42P60953 191 aa12.3□□□□□ -0.44
SQSTM1-201ENST00000360718 SHC2P98077 582 aa12.3□□□□□ -0.44
SQSTM1-201ENST00000360718 CDK6Q00534 326 aa12.3□□□□□ -0.44
SQSTM1-201ENST00000360718 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.3□□□□□ -0.44
SQSTM1-201ENST00000360718 EXOC3L2Q2M3D2 409 aa12.3□□□□□ -0.44
SQSTM1-201ENST00000360718 CRB2Q5IJ48 1285 aa12.3□□□□□ -0.44
SQSTM1-201ENST00000360718 BHLHB9Q6PI77 547 aa12.3□□□□□ -0.44
SQSTM1-201ENST00000360718 DBX2Q6ZNG2 339 aa12.3□□□□□ -0.44
SQSTM1-201ENST00000360718 TSEN54Q7Z6J9 526 aaKnown RBP12.3□□□□□ -0.44
SQSTM1-201ENST00000360718 SNX29P2Q8IUI4 249 aa12.3□□□□□ -0.44
SQSTM1-201ENST00000360718 CCDC116Q8IYX3 515 aa12.3□□□□□ -0.44
SQSTM1-201ENST00000360718 CA13Q8N1Q1 262 aa12.3□□□□□ -0.44
SQSTM1-201ENST00000360718 MOAP1Q96BY2 351 aa12.3□□□□□ -0.44
SQSTM1-201ENST00000360718 PIP5K1AQ99755 562 aa12.3□□□□□ -0.44
SQSTM1-201ENST00000360718 TMEM121BQ9BXQ6 578 aaPredicted RBP12.3□□□□□ -0.44
SQSTM1-201ENST00000360718 ZNF768Q9H5H4 540 aaKnown RBP12.3□□□□□ -0.44
SQSTM1-201ENST00000360718 ZBTB20Q9HC78 741 aaPredicted RBP12.3□□□□□ -0.44
SQSTM1-201ENST00000360718 INIPQ9NRY2 104 aa12.3□□□□□ -0.44
SQSTM1-201ENST00000360718 CCDC59Q9P031 241 aaKnown RBP12.3□□□□□ -0.44
SQSTM1-201ENST00000360718 ACSL6Q9UKU0 697 aa12.3□□□□□ -0.44
SQSTM1-201ENST00000360718 ANGPT4Q9Y264 503 aa12.3□□□□□ -0.44
SQSTM1-201ENST00000360718 MRPS33Q9Y291 106 aaKnown RBP12.3□□□□□ -0.44
SQSTM1-201ENST00000360718 MAP4K5Q9Y4K4 846 aa12.3□□□□□ -0.44
SQSTM1-201ENST00000360718 PNMA8CA0A1B0GUJ8 204 aa12.29□□□□□ -0.44
SQSTM1-201ENST00000360718 SH3D21A4FU49 640 aa12.29□□□□□ -0.44
SQSTM1-201ENST00000360718 FITM1A5D6W6 292 aa12.29□□□□□ -0.44
SQSTM1-201ENST00000360718 EFCAB10A6NFE3 127 aa12.29□□□□□ -0.44
SQSTM1-201ENST00000360718 CDX4O14627 284 aaPredicted RBP12.29□□□□□ -0.44
SQSTM1-201ENST00000360718 FOXS1O43638 330 aa12.29□□□□□ -0.44
SQSTM1-201ENST00000360718 OPN1SWP03999 348 aa12.29□□□□□ -0.44
SQSTM1-201ENST00000360718 MSL3P1P0C860 447 aa12.29□□□□□ -0.44
SQSTM1-201ENST00000360718 C8orf89P0DMQ9 161 aa12.29□□□□□ -0.44
SQSTM1-201ENST00000360718 RNH1P13489 461 aaKnown RBP12.29□□□□□ -0.44
SQSTM1-201ENST00000360718 GSSP48637 474 aa12.29□□□□□ -0.44
SQSTM1-201ENST00000360718 CCT3P49368 545 aaKnown RBP12.29□□□□□ -0.44
SQSTM1-201ENST00000360718 XKP51811 444 aa12.29□□□□□ -0.44
SQSTM1-201ENST00000360718 MVDP53602 400 aa12.29□□□□□ -0.44
SQSTM1-201ENST00000360718 SIM1P81133 766 aaPredicted RBP12.29□□□□□ -0.44
SQSTM1-201ENST00000360718 TIMM50Q3ZCQ8 353 aa12.29□□□□□ -0.44
SQSTM1-201ENST00000360718 PRAMEF17Q5VTA0 474 aa12.29□□□□□ -0.44
SQSTM1-201ENST00000360718 Q6ZPB1 254 aaPredicted RBP12.29□□□□□ -0.44
SQSTM1-201ENST00000360718 SZRD1Q7Z422 152 aa12.29□□□□□ -0.44
SQSTM1-201ENST00000360718 RNF130Q86XS8 419 aa12.29□□□□□ -0.44
SQSTM1-201ENST00000360718 LRRC25Q8N386 305 aaPredicted RBP12.29□□□□□ -0.44
SQSTM1-201ENST00000360718 RCBTB1Q8NDN9 531 aa12.29□□□□□ -0.44
SQSTM1-201ENST00000360718 TMEM52Q8NDY8 209 aa12.29□□□□□ -0.44
SQSTM1-201ENST00000360718 OR4D9Q8NGE8 314 aa12.29□□□□□ -0.44
SQSTM1-201ENST00000360718 OR52J3Q8NH60 311 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 235.6 ms