RNA–Protein interactions for RNA: ENST00000359895.6

PDLIM7-203, Transcript of PDZ and LIM domain 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDLIM7, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-203ENST00000359895 ACOT11Q8WXI4 607 aaPredicted RBP17.06■□□□□ 0.32
PDLIM7-203ENST00000359895 IL4I1Q96RQ9 567 aa17.06■□□□□ 0.32
PDLIM7-203ENST00000359895 CTPS2Q9NRF8 586 aa17.06■□□□□ 0.32
PDLIM7-203ENST00000359895 STARD5Q9NSY2 213 aa17.06■□□□□ 0.32
PDLIM7-203ENST00000359895 SEMA4GQ9NTN9 838 aa17.06■□□□□ 0.32
PDLIM7-203ENST00000359895 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP17.06■□□□□ 0.324e-7■■■■■ 30.8
PDLIM7-203ENST00000359895 MRPS33Q9Y291 106 aaKnown RBP17.06■□□□□ 0.32
PDLIM7-203ENST00000359895 TP53BP1Q12888 1972 aaPredicted RBP17.06■□□□□ 0.32
PDLIM7-203ENST00000359895 KRBA1A5PL33 1030 aa17.06■□□□□ 0.32
PDLIM7-203ENST00000359895 CHST10O43529 356 aa17.06■□□□□ 0.32
PDLIM7-203ENST00000359895 IGFBP1P08833 259 aaPredicted RBP17.06■□□□□ 0.32
PDLIM7-203ENST00000359895 RNH1P13489 461 aaKnown RBP17.06■□□□□ 0.32
PDLIM7-203ENST00000359895 GIPRP48546 466 aa17.06■□□□□ 0.32
PDLIM7-203ENST00000359895 STARD6P59095 220 aa17.06■□□□□ 0.32
PDLIM7-203ENST00000359895 EEF1A1P68104 462 aaKnown RBP17.06■□□□□ 0.32
PDLIM7-203ENST00000359895 CDK5Q00535 292 aa17.06■□□□□ 0.32
PDLIM7-203ENST00000359895 MGAT2Q10469 447 aa17.06■□□□□ 0.32
PDLIM7-203ENST00000359895 GINS1Q14691 196 aa17.06■□□□□ 0.32
PDLIM7-203ENST00000359895 MFSD4BQ5TF39 518 aa17.06■□□□□ 0.32
PDLIM7-203ENST00000359895 SLC46A3Q7Z3Q1 461 aa17.06■□□□□ 0.32
PDLIM7-203ENST00000359895 RANBP3LQ86VV4 465 aaPredicted RBP17.06■□□□□ 0.32
PDLIM7-203ENST00000359895 OR9A4Q8NGU2 314 aa17.06■□□□□ 0.32
PDLIM7-203ENST00000359895 TEX47Q8TBZ9 253 aa17.06■□□□□ 0.32
PDLIM7-203ENST00000359895 CTHRC1Q96CG8 243 aa17.06■□□□□ 0.32
PDLIM7-203ENST00000359895 LGALS12Q96DT0 336 aa17.06■□□□□ 0.32
PDLIM7-203ENST00000359895 SLC38A3Q99624 504 aa17.06■□□□□ 0.32
PDLIM7-203ENST00000359895 PRRG3Q9BZD7 231 aa17.06■□□□□ 0.32
PDLIM7-203ENST00000359895 RACGAP1Q9H0H5 632 aa17.06■□□□□ 0.32
PDLIM7-203ENST00000359895 PALMDQ9NP74 551 aa17.06■□□□□ 0.32
PDLIM7-203ENST00000359895 KRCC1Q9NPI7 259 aaPredicted RBP17.06■□□□□ 0.32
PDLIM7-203ENST00000359895 TBC1D23Q9NUY8 699 aa17.06■□□□□ 0.32
PDLIM7-203ENST00000359895 VCANP13611 3396 aa17.05■□□□□ 0.32
PDLIM7-203ENST00000359895 A0A1B0GVG6 124 aa17.05■□□□□ 0.32
PDLIM7-203ENST00000359895 EFCAB9A8MZ26 197 aa17.05■□□□□ 0.32
PDLIM7-203ENST00000359895 FRS3O43559 492 aa17.05■□□□□ 0.32
PDLIM7-203ENST00000359895 HCRTR1O43613 425 aa17.05■□□□□ 0.32
PDLIM7-203ENST00000359895 FOXD2O60548 495 aaPredicted RBP17.05■□□□□ 0.32
PDLIM7-203ENST00000359895 LIPAP38571 399 aa17.05■□□□□ 0.32
PDLIM7-203ENST00000359895 MAP3K8P41279 467 aa17.05■□□□□ 0.32
PDLIM7-203ENST00000359895 PCYT1AP49585 367 aa17.05■□□□□ 0.32
PDLIM7-203ENST00000359895 POU6F2P78424 691 aaPredicted RBP17.05■□□□□ 0.32
PDLIM7-203ENST00000359895 MAP4K2Q12851 820 aa17.05■□□□□ 0.32
PDLIM7-203ENST00000359895 NCF4Q15080 339 aa17.05■□□□□ 0.32
PDLIM7-203ENST00000359895 GPR68Q15743 365 aa17.05■□□□□ 0.32
PDLIM7-203ENST00000359895 DEFB110Q30KQ9 67 aa17.05■□□□□ 0.32
PDLIM7-203ENST00000359895 RASSF6Q6ZTQ3 369 aa17.05■□□□□ 0.32
PDLIM7-203ENST00000359895 SLCO6A1Q86UG4 719 aa17.05■□□□□ 0.32
PDLIM7-203ENST00000359895 TCEANCQ8N8B7 351 aa17.05■□□□□ 0.32
PDLIM7-203ENST00000359895 SIMC1Q8NDZ2 872 aa17.05■□□□□ 0.32
PDLIM7-203ENST00000359895 SLC41A3Q96GZ6 507 aa17.05■□□□□ 0.32
PDLIM7-203ENST00000359895 ARMC7Q9H6L4 198 aa17.05■□□□□ 0.32
PDLIM7-203ENST00000359895 HYKKA2RU49 373 aa17.04■□□□□ 0.32
PDLIM7-203ENST00000359895 AIREO43918 545 aa17.04■□□□□ 0.32
PDLIM7-203ENST00000359895 KIAA0513O60268 411 aa17.04■□□□□ 0.32
PDLIM7-203ENST00000359895 OR10H2O60403 315 aa17.04■□□□□ 0.32
PDLIM7-203ENST00000359895 PTHP01270 115 aa17.04■□□□□ 0.32
PDLIM7-203ENST00000359895 GUSBP08236 651 aa17.04■□□□□ 0.32
PDLIM7-203ENST00000359895 TRHRP34981 398 aaPredicted RBP17.04■□□□□ 0.32
PDLIM7-203ENST00000359895 UGT2B10P36537 528 aa17.04■□□□□ 0.32
PDLIM7-203ENST00000359895 STAT5AP42229 794 aa17.04■□□□□ 0.32
PDLIM7-203ENST00000359895 CLK1P49759 484 aaKnown RBP17.04■□□□□ 0.32
PDLIM7-203ENST00000359895 VBP1P61758 197 aa17.04■□□□□ 0.32
PDLIM7-203ENST00000359895 HNRNPKP61978 463 aaKnown RBP eCLIP17.04■□□□□ 0.326e-7■■■■■ 31.4
PDLIM7-203ENST00000359895 TUBA1BP68363 451 aa17.04■□□□□ 0.32
PDLIM7-203ENST00000359895 KHDRBS1Q07666 443 aaKnown RBP eCLIP17.04■□□□□ 0.32
PDLIM7-203ENST00000359895 FAM53BQ14153 422 aa17.04■□□□□ 0.32
PDLIM7-203ENST00000359895 SYT16Q17RD7 645 aa17.04■□□□□ 0.32
PDLIM7-203ENST00000359895 GARNL3Q5VVW2 1013 aa17.04■□□□□ 0.32
PDLIM7-203ENST00000359895 RNLSQ5VYX0 342 aa17.04■□□□□ 0.32
PDLIM7-203ENST00000359895 TUBA1AQ71U36 451 aa17.04■□□□□ 0.32
PDLIM7-203ENST00000359895 C17orf82Q86X59 251 aaPredicted RBP17.04■□□□□ 0.32
PDLIM7-203ENST00000359895 DEFB119Q8N690 84 aa17.04■□□□□ 0.32
PDLIM7-203ENST00000359895 NDNFQ8TB73 568 aa17.04■□□□□ 0.32
PDLIM7-203ENST00000359895 DYNC2LI1Q8TCX1 351 aa17.04■□□□□ 0.32
PDLIM7-203ENST00000359895 GPR151Q8TDV0 419 aa17.04■□□□□ 0.32
PDLIM7-203ENST00000359895 HOXB13Q92826 284 aaPredicted RBP17.04■□□□□ 0.32
PDLIM7-203ENST00000359895 VMP1Q96GC9 406 aa17.04■□□□□ 0.32
PDLIM7-203ENST00000359895 TMEM80Q96HE8 168 aa17.04■□□□□ 0.32
PDLIM7-203ENST00000359895 TVP23BQ9NYZ1 205 aa17.04■□□□□ 0.32
PDLIM7-203ENST00000359895 DNAJC27Q9NZQ0 273 aa17.04■□□□□ 0.32
PDLIM7-203ENST00000359895 WNT16Q9UBV4 365 aa17.04■□□□□ 0.32
PDLIM7-203ENST00000359895 CACNA1IQ9P0X4 2223 aa17.04■□□□□ 0.32
PDLIM7-203ENST00000359895 NKX2-2O95096 273 aa17.03■□□□□ 0.32
PDLIM7-203ENST00000359895 RPLP0P05388 317 aaKnown RBP17.03■□□□□ 0.32
PDLIM7-203ENST00000359895 CSTF2P33240 577 aaKnown RBP eCLIP17.03■□□□□ 0.32
PDLIM7-203ENST00000359895 OMPP47874 163 aa17.03■□□□□ 0.32
PDLIM7-203ENST00000359895 BMXP51813 675 aa17.03■□□□□ 0.32
PDLIM7-203ENST00000359895 C21orf59P57076 290 aa17.03■□□□□ 0.32
PDLIM7-203ENST00000359895 LSM3P62310 102 aaKnown RBP17.03■□□□□ 0.32
PDLIM7-203ENST00000359895 NR1D2Q14995 579 aa17.03■□□□□ 0.32
PDLIM7-203ENST00000359895 ARMCX4Q5H9R4 360 aa17.03■□□□□ 0.32
PDLIM7-203ENST00000359895 PRICKLE2Q7Z3G6 844 aa17.03■□□□□ 0.32
PDLIM7-203ENST00000359895 GDF7Q7Z4P5 450 aa17.03■□□□□ 0.32
PDLIM7-203ENST00000359895 MRGPREQ86SM8 312 aa17.03■□□□□ 0.32
PDLIM7-203ENST00000359895 ADCK1Q86TW2 530 aa17.03■□□□□ 0.32
PDLIM7-203ENST00000359895 ZNF595Q8IYB9 648 aa17.03■□□□□ 0.32
PDLIM7-203ENST00000359895 VWA5B2Q8N398 1253 aa17.03■□□□□ 0.32
PDLIM7-203ENST00000359895 OR6C4Q8NGE1 309 aa17.03■□□□□ 0.32
PDLIM7-203ENST00000359895 S100ZQ8WXG8 99 aa17.03■□□□□ 0.32
PDLIM7-203ENST00000359895 ZNF285Q96NJ3 590 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms