RNA–Protein interactions for RNA: ENST00000359683.8

NIF3L1-201, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,626 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-201ENST00000359683 SYPL1Q16563 259 aa11.43□□□□□ -0.58
NIF3L1-201ENST00000359683 TBR1Q16650 682 aa11.43□□□□□ -0.58
NIF3L1-201ENST00000359683 ZSCAN26Q16670 478 aa11.43□□□□□ -0.58
NIF3L1-201ENST00000359683 DECR1Q16698 335 aa11.43□□□□□ -0.58
NIF3L1-201ENST00000359683 ZNF630Q2M218 657 aaPredicted RBP11.43□□□□□ -0.58
NIF3L1-201ENST00000359683 ZNF791Q3KP31 576 aaPredicted RBP11.43□□□□□ -0.58
NIF3L1-201ENST00000359683 SPATS1Q496A3 300 aa11.43□□□□□ -0.58
NIF3L1-201ENST00000359683 SAMD4BQ5PRF9 694 aaKnown RBP11.43□□□□□ -0.58
NIF3L1-201ENST00000359683 DCST2Q5T1A1 773 aa11.43□□□□□ -0.58
NIF3L1-201ENST00000359683 ABHD17BQ5VST6 288 aa11.43□□□□□ -0.58
NIF3L1-201ENST00000359683 BORAQ6PGQ7 559 aa11.43□□□□□ -0.58
NIF3L1-201ENST00000359683 OPN5Q6U736 354 aa11.43□□□□□ -0.58
NIF3L1-201ENST00000359683 ISLR2Q6UXK2 745 aa11.43□□□□□ -0.58
NIF3L1-201ENST00000359683 BNC2Q6ZN30 1099 aaPredicted RBP11.43□□□□□ -0.58
NIF3L1-201ENST00000359683 ZZZ3Q8IYH5 903 aa11.43□□□□□ -0.58
NIF3L1-201ENST00000359683 MAL2Q969L2 176 aa11.43□□□□□ -0.58
NIF3L1-201ENST00000359683 TMBIM1Q969X1 311 aa11.43□□□□□ -0.58
NIF3L1-201ENST00000359683 OMA1Q96E52 524 aa11.43□□□□□ -0.58
NIF3L1-201ENST00000359683 REXO5Q96IC2 774 aaKnown RBP11.43□□□□□ -0.58
NIF3L1-201ENST00000359683 TRNT1Q96Q11 434 aaKnown RBP11.43□□□□□ -0.58
NIF3L1-201ENST00000359683 PIF1Q9H611 641 aa11.43□□□□□ -0.58
NIF3L1-201ENST00000359683 FBXO34Q9NWN3 711 aa11.43□□□□□ -0.58
NIF3L1-201ENST00000359683 P2RX2Q9UBL9 471 aa11.43□□□□□ -0.58
NIF3L1-201ENST00000359683 MRTO4Q9UKD2 239 aaKnown RBP11.43□□□□□ -0.58
NIF3L1-201ENST00000359683 PRPF19Q9UMS4 504 aaKnown RBP11.43□□□□□ -0.58
NIF3L1-201ENST00000359683 PRORSD1PA6NEY8 169 aa11.42□□□□□ -0.58
NIF3L1-201ENST00000359683 FAM220BPB1ANY3 271 aa11.42□□□□□ -0.58
NIF3L1-201ENST00000359683 GSC2O15499 205 aa11.42□□□□□ -0.58
NIF3L1-201ENST00000359683 REM1O75628 298 aa11.42□□□□□ -0.58
NIF3L1-201ENST00000359683 PPM1BO75688 479 aa11.42□□□□□ -0.58
NIF3L1-201ENST00000359683 ITGB2P05107 769 aa11.42□□□□□ -0.58
NIF3L1-201ENST00000359683 NR2F1P10589 423 aa11.42□□□□□ -0.58
NIF3L1-201ENST00000359683 HSD17B1P14061 328 aa11.42□□□□□ -0.58
NIF3L1-201ENST00000359683 SSR4P51571 173 aa11.42□□□□□ -0.58
NIF3L1-201ENST00000359683 PNLIPRP2P54317 469 aa11.42□□□□□ -0.58
NIF3L1-201ENST00000359683 CDK6Q00534 326 aa11.42□□□□□ -0.58
NIF3L1-201ENST00000359683 PLCXD2Q0VAA5 305 aa11.42□□□□□ -0.58
NIF3L1-201ENST00000359683 MFAP5Q13361 173 aa11.42□□□□□ -0.58
NIF3L1-201ENST00000359683 CEACAM7Q14002 265 aa11.42□□□□□ -0.58
NIF3L1-201ENST00000359683 CYP51A1Q16850 503 aa11.42□□□□□ -0.58
NIF3L1-201ENST00000359683 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.42□□□□□ -0.58
NIF3L1-201ENST00000359683 VMACQ2NL98 169 aa11.42□□□□□ -0.58
NIF3L1-201ENST00000359683 CCNJQ5T5M9 372 aa11.42□□□□□ -0.58
NIF3L1-201ENST00000359683 ERICH5Q6P6B1 374 aa11.42□□□□□ -0.58
NIF3L1-201ENST00000359683 FIGNL1Q6PIW4 674 aa11.42□□□□□ -0.58
NIF3L1-201ENST00000359683 IGFL2Q6UWQ7 119 aa11.42□□□□□ -0.58
NIF3L1-201ENST00000359683 LRRC74BQ6ZQY2 392 aa11.42□□□□□ -0.58
NIF3L1-201ENST00000359683 ASRGL1Q7L266 308 aa11.42□□□□□ -0.58
NIF3L1-201ENST00000359683 C16orf62Q7Z3J2 963 aa11.42□□□□□ -0.58
NIF3L1-201ENST00000359683 PRR22Q8IZ63 422 aa11.42□□□□□ -0.58
NIF3L1-201ENST00000359683 BEST3Q8N1M1 668 aa11.42□□□□□ -0.58
NIF3L1-201ENST00000359683 ANKFN1Q8N957 763 aa11.42□□□□□ -0.58
NIF3L1-201ENST00000359683 C11orf65Q8NCR3 313 aa11.42□□□□□ -0.58
NIF3L1-201ENST00000359683 OR2T12Q8NG77 320 aa11.42□□□□□ -0.58
NIF3L1-201ENST00000359683 DIO2Q92813 273 aa11.42□□□□□ -0.58
NIF3L1-201ENST00000359683 SMAD5Q99717 465 aaKnown RBP11.42□□□□□ -0.58
NIF3L1-201ENST00000359683 G6PC3Q9BUM1 346 aa11.42□□□□□ -0.58
NIF3L1-201ENST00000359683 CADM1Q9BY67 442 aaKnown RBP11.42□□□□□ -0.58
NIF3L1-201ENST00000359683 ZNF350Q9GZX5 532 aa11.42□□□□□ -0.58
NIF3L1-201ENST00000359683 SAP130Q9H0E3 1048 aa11.42□□□□□ -0.58
NIF3L1-201ENST00000359683 LRMDAQ9H2I8 198 aa11.42□□□□□ -0.58
NIF3L1-201ENST00000359683 ALG2Q9H553 416 aa11.42□□□□□ -0.58
NIF3L1-201ENST00000359683 TRIM45Q9H8W5 580 aaPredicted RBP11.42□□□□□ -0.58
NIF3L1-201ENST00000359683 BCL2L10Q9HD36 194 aa11.42□□□□□ -0.58
NIF3L1-201ENST00000359683 POLE3Q9NRF9 147 aa11.42□□□□□ -0.58
NIF3L1-201ENST00000359683 GMPR2Q9P2T1 348 aaKnown RBP11.42□□□□□ -0.58
NIF3L1-201ENST00000359683 USP22Q9UPT9 525 aa11.42□□□□□ -0.58
NIF3L1-201ENST00000359683 ZNF451Q9Y4E5 1061 aa11.42□□□□□ -0.58
NIF3L1-201ENST00000359683 TMEM247A6NEH6 219 aa11.42□□□□□ -0.58
NIF3L1-201ENST00000359683 OR6C70A6NIJ9 312 aa11.42□□□□□ -0.58
NIF3L1-201ENST00000359683 SLC28A2O43868 658 aa11.42□□□□□ -0.58
NIF3L1-201ENST00000359683 FCMRO60667 390 aa11.42□□□□□ -0.58
NIF3L1-201ENST00000359683 STX11O75558 287 aa11.42□□□□□ -0.58
NIF3L1-201ENST00000359683 DNAJC8O75937 253 aaPredicted RBP11.42□□□□□ -0.58
NIF3L1-201ENST00000359683 OR6B1O95007 311 aa11.42□□□□□ -0.58
NIF3L1-201ENST00000359683 ZIC2O95409 532 aaPredicted RBP11.42□□□□□ -0.58
NIF3L1-201ENST00000359683 ALPPP05187 535 aa11.42□□□□□ -0.58
NIF3L1-201ENST00000359683 CHRM4P08173 479 aa11.42□□□□□ -0.58
NIF3L1-201ENST00000359683 LCN1P31025 176 aa11.42□□□□□ -0.58
NIF3L1-201ENST00000359683 PCGF2P35227 344 aa11.42□□□□□ -0.58
NIF3L1-201ENST00000359683 SOX3P41225 446 aa11.42□□□□□ -0.58
NIF3L1-201ENST00000359683 PSMD4P55036 377 aaKnown RBP11.42□□□□□ -0.58
NIF3L1-201ENST00000359683 RAPSNQ13702 412 aa11.42□□□□□ -0.58
NIF3L1-201ENST00000359683 VEZF1Q14119 521 aa11.42□□□□□ -0.58
NIF3L1-201ENST00000359683 GNA13Q14344 377 aa11.42□□□□□ -0.58
NIF3L1-201ENST00000359683 FXNQ16595 210 aa11.42□□□□□ -0.58
NIF3L1-201ENST00000359683 NTRK2Q16620 822 aa11.42□□□□□ -0.58
NIF3L1-201ENST00000359683 GPAT3Q53EU6 434 aa11.42□□□□□ -0.58
NIF3L1-201ENST00000359683 ZNF468Q5VIY5 522 aaPredicted RBP11.42□□□□□ -0.58
NIF3L1-201ENST00000359683 PRAMEF8Q5VWM4 474 aa11.42□□□□□ -0.58
NIF3L1-201ENST00000359683 PRAMEF7Q5VXH5 474 aa11.42□□□□□ -0.58
NIF3L1-201ENST00000359683 PGM2L1Q6PCE3 622 aa11.42□□□□□ -0.58
NIF3L1-201ENST00000359683 NUP54Q7Z3B4 507 aa11.42□□□□□ -0.58
NIF3L1-201ENST00000359683 ZAR1Q86SH2 424 aa11.42□□□□□ -0.58
NIF3L1-201ENST00000359683 IFNEQ86WN2 208 aa11.42□□□□□ -0.58
NIF3L1-201ENST00000359683 GPALPP1Q8IXQ4 340 aa11.42□□□□□ -0.58
NIF3L1-201ENST00000359683 MICU2Q8IYU8 434 aa11.42□□□□□ -0.58
NIF3L1-201ENST00000359683 DND1Q8IYX4 353 aaKnown RBP11.42□□□□□ -0.58
NIF3L1-201ENST00000359683 TMEM156Q8N614 296 aa11.42□□□□□ -0.58
NIF3L1-201ENST00000359683 RNF148Q8N7C7 305 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms