RNA–Protein interactions for RNA: ENST00000358771.4

SIRPA-202, Transcript of signal regulatory protein alpha, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SIRPA, Length 3,996 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPA-202ENST00000358771 NAA10P41227 235 aaPredicted RBP13.37□□□□□ -0.27
SIRPA-202ENST00000358771 CAV3P56539 151 aa13.37□□□□□ -0.27
SIRPA-202ENST00000358771 CSTF1Q05048 431 aaKnown RBP13.37□□□□□ -0.27
SIRPA-202ENST00000358771 CRYZQ08257 329 aaKnown RBP13.37□□□□□ -0.27
SIRPA-202ENST00000358771 ZNF793Q6ZN11 406 aa13.37□□□□□ -0.27
SIRPA-202ENST00000358771 PTCHD1Q96NR3 888 aa13.37□□□□□ -0.27
SIRPA-202ENST00000358771 MTHFD2LQ9H903 347 aaPredicted RBP13.37□□□□□ -0.27
SIRPA-202ENST00000358771 PCDHGA4Q9Y5G9 962 aa13.37□□□□□ -0.27
SIRPA-202ENST00000358771 A8MVJ9 347 aa13.37□□□□□ -0.27
SIRPA-202ENST00000358771 GPR89AB7ZAQ6 455 aa13.37□□□□□ -0.27
SIRPA-202ENST00000358771 GPR89BP0CG08 455 aa13.37□□□□□ -0.27
SIRPA-202ENST00000358771 ACVR1BP36896 505 aa13.37□□□□□ -0.27
SIRPA-202ENST00000358771 PDX1P52945 283 aa13.37□□□□□ -0.27
SIRPA-202ENST00000358771 ODF4Q2M2E3 257 aa13.37□□□□□ -0.27
SIRPA-202ENST00000358771 MPEG1Q2M385 716 aa13.37□□□□□ -0.27
SIRPA-202ENST00000358771 MEDAGQ5VYS4 303 aa13.37□□□□□ -0.27
SIRPA-202ENST00000358771 NIPAL1Q6NVV3 410 aa13.37□□□□□ -0.27
SIRPA-202ENST00000358771 FRRS1Q6ZNA5 592 aa13.37□□□□□ -0.27
SIRPA-202ENST00000358771 UXS1Q8NBZ7 420 aa13.37□□□□□ -0.27
SIRPA-202ENST00000358771 OR13H1Q8NG92 308 aa13.37□□□□□ -0.27
SIRPA-202ENST00000358771 OR6Q1Q8NGQ2 317 aa13.37□□□□□ -0.27
SIRPA-202ENST00000358771 ELP4Q96EB1 424 aa13.37□□□□□ -0.27
SIRPA-202ENST00000358771 MS4A4EQ96PG1 132 aa13.37□□□□□ -0.27
SIRPA-202ENST00000358771 NELL2Q99435 816 aa13.37□□□□□ -0.27
SIRPA-202ENST00000358771 DPYSL5Q9BPU6 564 aa13.37□□□□□ -0.27
SIRPA-202ENST00000358771 HCN2Q9UL51 889 aa13.37□□□□□ -0.27
SIRPA-202ENST00000358771 A0A1B0GVT2 93 aa13.36□□□□□ -0.27
SIRPA-202ENST00000358771 RPP14O95059 124 aaKnown RBP13.36□□□□□ -0.27
SIRPA-202ENST00000358771 UGT2B7P16662 529 aa13.36□□□□□ -0.27
SIRPA-202ENST00000358771 SDC2P34741 201 aa13.36□□□□□ -0.27
SIRPA-202ENST00000358771 SEC23BQ15437 767 aa13.36□□□□□ -0.27
SIRPA-202ENST00000358771 TRMT12Q53H54 448 aaKnown RBP13.36□□□□□ -0.27
SIRPA-202ENST00000358771 CXXC5Q7LFL8 322 aaKnown RBP13.36□□□□□ -0.27
SIRPA-202ENST00000358771 RAB43Q86YS6 212 aa13.36□□□□□ -0.27
SIRPA-202ENST00000358771 LACC1Q8IV20 430 aa13.36□□□□□ -0.27
SIRPA-202ENST00000358771 IL17RCQ8NAC3 791 aa13.36□□□□□ -0.27
SIRPA-202ENST00000358771 SLC25A36Q96CQ1 311 aa13.36□□□□□ -0.27
SIRPA-202ENST00000358771 ZG16BQ96DA0 208 aa13.36□□□□□ -0.27
SIRPA-202ENST00000358771 GAL3ST1Q99999 423 aa13.36□□□□□ -0.27
SIRPA-202ENST00000358771 KCNE3Q9Y6H6 103 aa13.36□□□□□ -0.27
SIRPA-202ENST00000358771 MYLKQ15746 1914 aa13.36□□□□□ -0.27
SIRPA-202ENST00000358771 C2orf92A0A1B0GVN3 265 aa13.36□□□□□ -0.27
SIRPA-202ENST00000358771 SLC9B1P1A6NJY1 282 aa13.36□□□□□ -0.27
SIRPA-202ENST00000358771 CHRM4P08173 479 aa13.36□□□□□ -0.27
SIRPA-202ENST00000358771 HTR1AP08908 422 aa13.36□□□□□ -0.27
SIRPA-202ENST00000358771 NKX2-5P52952 324 aaPredicted RBP13.36□□□□□ -0.27
SIRPA-202ENST00000358771 MAT1AQ00266 395 aaKnown RBP13.36□□□□□ -0.27
SIRPA-202ENST00000358771 BNC1Q01954 994 aa13.36□□□□□ -0.27
SIRPA-202ENST00000358771 MLF2Q15773 248 aaPredicted RBP13.36□□□□□ -0.27
SIRPA-202ENST00000358771 SLC48A1Q6P1K1 146 aa13.36□□□□□ -0.27
SIRPA-202ENST00000358771 CCBE1Q6UXH8 406 aaPredicted RBP13.36□□□□□ -0.27
SIRPA-202ENST00000358771 NEIL3Q8TAT5 605 aa13.36□□□□□ -0.27
SIRPA-202ENST00000358771 PRTFDC1Q9NRG1 225 aa13.36□□□□□ -0.27
SIRPA-202ENST00000358771 THSD1Q9NS62 852 aa13.36□□□□□ -0.27
SIRPA-202ENST00000358771 OR2A25A4D2G3 310 aa13.36□□□□□ -0.27
SIRPA-202ENST00000358771 RCBTB2O95199 551 aa13.36□□□□□ -0.27
SIRPA-202ENST00000358771 ACVR2AP27037 513 aa13.36□□□□□ -0.27
SIRPA-202ENST00000358771 GZMMP51124 257 aa13.36□□□□□ -0.27
SIRPA-202ENST00000358771 TPMTP51580 245 aa13.36□□□□□ -0.27
SIRPA-202ENST00000358771 PUS10Q3MIT2 529 aaKnown RBP13.36□□□□□ -0.27
SIRPA-202ENST00000358771 SAXO2Q658L1 398 aa13.36□□□□□ -0.27
SIRPA-202ENST00000358771 PGBD2Q6P3X8 592 aa13.36□□□□□ -0.27
SIRPA-202ENST00000358771 FAHD1Q6P587 224 aa13.36□□□□□ -0.27
SIRPA-202ENST00000358771 FAM160A2Q8N612 972 aaPredicted RBP13.36□□□□□ -0.27
SIRPA-202ENST00000358771 MKKSQ9NPJ1 570 aaPredicted RBP13.36□□□□□ -0.27
SIRPA-202ENST00000358771 GPATCH2Q9NW75 528 aa13.36□□□□□ -0.27
SIRPA-202ENST00000358771 OR2W5A6NFC9 320 aa13.35□□□□□ -0.27
SIRPA-202ENST00000358771 PRKYO43930 277 aa13.35□□□□□ -0.27
SIRPA-202ENST00000358771 PRKNO60260 465 aaPredicted RBP13.35□□□□□ -0.27
SIRPA-202ENST00000358771 ERMAPQ96PL5 475 aaPredicted RBP13.35□□□□□ -0.27
SIRPA-202ENST00000358771 CDCA3Q99618 268 aaPredicted RBP13.35□□□□□ -0.27
SIRPA-202ENST00000358771 C1QTNF2Q9BXJ5 285 aa13.35□□□□□ -0.27
SIRPA-202ENST00000358771 PINK1Q9BXM7 581 aa13.35□□□□□ -0.27
SIRPA-202ENST00000358771 MED20Q9H944 212 aa13.35□□□□□ -0.27
SIRPA-202ENST00000358771 SLC6A14Q9UN76 642 aa13.35□□□□□ -0.27
SIRPA-202ENST00000358771 LOC105369274A0A096LPK9 316 aa13.35□□□□□ -0.27
SIRPA-202ENST00000358771 LOC102723532A0A0G2JNH3 316 aa13.35□□□□□ -0.27
SIRPA-202ENST00000358771 ELOA3DA6NLF2 546 aaPredicted RBP13.35□□□□□ -0.27
SIRPA-202ENST00000358771 TMEM150CB9EJG8 249 aa13.35□□□□□ -0.27
SIRPA-202ENST00000358771 CSTAP01040 98 aa13.35□□□□□ -0.27
SIRPA-202ENST00000358771 GRPRP30550 384 aa13.35□□□□□ -0.27
SIRPA-202ENST00000358771 PYCR1P32322 319 aa13.35□□□□□ -0.27
SIRPA-202ENST00000358771 OR2B6P58173 313 aa13.35□□□□□ -0.27
SIRPA-202ENST00000358771 LGALS3BPQ08380 585 aa13.35□□□□□ -0.27
SIRPA-202ENST00000358771 PUM1Q14671 1186 aaKnown RBP eCLIP13.35□□□□□ -0.27
SIRPA-202ENST00000358771 KIR2DS3Q14952 304 aa13.35□□□□□ -0.27
SIRPA-202ENST00000358771 ELOA3BQ3SY89 546 aa13.35□□□□□ -0.27
SIRPA-202ENST00000358771 ZER1Q7Z7L7 766 aa13.35□□□□□ -0.27
SIRPA-202ENST00000358771 NKAIN4Q8IVV8 208 aa13.35□□□□□ -0.27
SIRPA-202ENST00000358771 OR4N4Q8N0Y3 316 aa13.35□□□□□ -0.27
SIRPA-202ENST00000358771 ELOA3Q8NG57 546 aa13.35□□□□□ -0.27
SIRPA-202ENST00000358771 RIT1Q92963 219 aa13.35□□□□□ -0.27
SIRPA-202ENST00000358771 DDX31Q9H8H2 851 aaKnown RBP13.35□□□□□ -0.27
SIRPA-202ENST00000358771 SMURF1Q9HCE7 757 aa13.35□□□□□ -0.27
SIRPA-202ENST00000358771 ZNF226Q9NYT6 803 aa13.35□□□□□ -0.27
SIRPA-202ENST00000358771 KLHL18O94889 574 aa13.35□□□□□ -0.27
SIRPA-202ENST00000358771 HLA-DPB1P04440 258 aa13.35□□□□□ -0.27
SIRPA-202ENST00000358771 PSKH1P11801 424 aa13.35□□□□□ -0.27
SIRPA-202ENST00000358771 GRK6P43250 576 aa13.35□□□□□ -0.27
SIRPA-202ENST00000358771 MAZP56270 477 aaKnown RBP13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms