RNA–Protein interactions for RNA: ENST00000358028.8

NIPAL3-203, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 1,757 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-203ENST00000358028 TRIM61Q5EBN2 209 aa13.38□□□□□ -0.27
NIPAL3-203ENST00000358028 MFSD4BQ5TF39 518 aa13.38□□□□□ -0.27
NIPAL3-203ENST00000358028 PRR23CQ6ZRP0 262 aa13.38□□□□□ -0.27
NIPAL3-203ENST00000358028 ASPGQ86U10 573 aa13.38□□□□□ -0.27
NIPAL3-203ENST00000358028 GALNT6Q8NCL4 622 aa13.38□□□□□ -0.27
NIPAL3-203ENST00000358028 NT5CQ8TCD5 201 aa13.38□□□□□ -0.27
NIPAL3-203ENST00000358028 TSACCQ96A04 125 aaPredicted RBP13.38□□□□□ -0.27
NIPAL3-203ENST00000358028 C16orf58Q96GQ5 468 aa13.38□□□□□ -0.27
NIPAL3-203ENST00000358028 BMFQ96LC9 184 aa13.38□□□□□ -0.27
NIPAL3-203ENST00000358028 SLC6A18Q96N87 628 aa13.38□□□□□ -0.27
NIPAL3-203ENST00000358028 OR5M11Q96RB7 305 aa13.38□□□□□ -0.27
NIPAL3-203ENST00000358028 MND1Q9BWT6 205 aa13.38□□□□□ -0.27
NIPAL3-203ENST00000358028 SRMSQ9H3Y6 488 aa13.38□□□□□ -0.27
NIPAL3-203ENST00000358028 ANKMY1Q9P2S6 941 aa13.38□□□□□ -0.27
NIPAL3-203ENST00000358028 SEC14L4Q9UDX3 406 aa13.38□□□□□ -0.27
NIPAL3-203ENST00000358028 ZNF229Q9UJW7 825 aa13.38□□□□□ -0.27
NIPAL3-203ENST00000358028 PCOLCE2Q9UKZ9 415 aa13.38□□□□□ -0.27
NIPAL3-203ENST00000358028 ARHGAP33O14559 1287 aa13.37□□□□□ -0.27
NIPAL3-203ENST00000358028 CASC3O15234 703 aaKnown RBP13.37□□□□□ -0.27
NIPAL3-203ENST00000358028 EPPINO95925 133 aa13.37□□□□□ -0.27
NIPAL3-203ENST00000358028 LGI1O95970 557 aa13.37□□□□□ -0.27
NIPAL3-203ENST00000358028 CFIP05156 583 aa13.37□□□□□ -0.27
NIPAL3-203ENST00000358028 MPIP34949 423 aa13.37□□□□□ -0.27
NIPAL3-203ENST00000358028 HOXD12P35452 270 aa13.37□□□□□ -0.27
NIPAL3-203ENST00000358028 ACTR1BP42025 376 aa13.37□□□□□ -0.27
NIPAL3-203ENST00000358028 ACTR1AP61163 376 aa13.37□□□□□ -0.27
NIPAL3-203ENST00000358028 PIN1Q13526 163 aaPredicted RBP13.37□□□□□ -0.27
NIPAL3-203ENST00000358028 GPAT3Q53EU6 434 aa13.37□□□□□ -0.27
NIPAL3-203ENST00000358028 PRRT3Q5FWE3 981 aa13.37□□□□□ -0.27
NIPAL3-203ENST00000358028 PODNL1Q6PEZ8 512 aa13.37□□□□□ -0.27
NIPAL3-203ENST00000358028 SNX29P2Q8IUI4 249 aa13.37□□□□□ -0.27
NIPAL3-203ENST00000358028 FAM26EQ8N5C1 309 aa13.37□□□□□ -0.27
NIPAL3-203ENST00000358028 PARP16Q8N5Y8 322 aa13.37□□□□□ -0.27
NIPAL3-203ENST00000358028 NUP43Q8NFH3 380 aa13.37□□□□□ -0.27
NIPAL3-203ENST00000358028 OR9A2Q8NGT5 310 aa13.37□□□□□ -0.27
NIPAL3-203ENST00000358028 CCL4L1Q8NHW4 92 aa13.37□□□□□ -0.27
NIPAL3-203ENST00000358028 SLC22A18Q96BI1 424 aa13.37□□□□□ -0.27
NIPAL3-203ENST00000358028 ZNF681Q96N22 645 aa13.37□□□□□ -0.27
NIPAL3-203ENST00000358028 OPALINQ96PE5 141 aa13.37□□□□□ -0.27
NIPAL3-203ENST00000358028 OR7D2Q96RA2 312 aa13.37□□□□□ -0.27
NIPAL3-203ENST00000358028 FNDC11Q9BVV2 318 aa13.37□□□□□ -0.27
NIPAL3-203ENST00000358028 PINK1Q9BXM7 581 aa13.37□□□□□ -0.27
NIPAL3-203ENST00000358028 POLDIP3Q9BY77 421 aaKnown RBP13.37□□□□□ -0.27
NIPAL3-203ENST00000358028 C3orf14Q9HBI5 128 aa13.37□□□□□ -0.27
NIPAL3-203ENST00000358028 ABCB10Q9NRK6 738 aa13.37□□□□□ -0.27
NIPAL3-203ENST00000358028 KCNE3Q9Y6H6 103 aa13.37□□□□□ -0.27
NIPAL3-203ENST00000358028 ZNF780BQ9Y6R6 833 aa13.37□□□□□ -0.27
NIPAL3-203ENST00000358028 SPTBN2O15020 2390 aa13.37□□□□□ -0.27
NIPAL3-203ENST00000358028 LNP1A1A4G5 178 aa13.37□□□□□ -0.27
NIPAL3-203ENST00000358028 IRGMA1A4Y4 181 aa13.37□□□□□ -0.27
NIPAL3-203ENST00000358028 H3BN98 237 aa13.37□□□□□ -0.27
NIPAL3-203ENST00000358028 BCAT2O15382 392 aaPredicted RBP13.37□□□□□ -0.27
NIPAL3-203ENST00000358028 NME6O75414 186 aaPredicted RBP13.37□□□□□ -0.27
NIPAL3-203ENST00000358028 RASGRP1O95267 797 aa13.37□□□□□ -0.27
NIPAL3-203ENST00000358028 SOX14O95416 240 aa13.37□□□□□ -0.27
NIPAL3-203ENST00000358028 IGFBP1P08833 259 aaPredicted RBP13.37□□□□□ -0.27
NIPAL3-203ENST00000358028 ZNF888P0CJ79 500 aaPredicted RBP13.37□□□□□ -0.27
NIPAL3-203ENST00000358028 NR2F6P10588 404 aa13.37□□□□□ -0.27
NIPAL3-203ENST00000358028 GSTM3P21266 225 aa13.37□□□□□ -0.27
NIPAL3-203ENST00000358028 HNRNPA2B1P22626 353 aaKnown RBP13.37□□□□□ -0.27
NIPAL3-203ENST00000358028 BUD31P41223 144 aaPredicted RBP13.37□□□□□ -0.27
NIPAL3-203ENST00000358028 MC3RP41968 323 aa13.37□□□□□ -0.27
NIPAL3-203ENST00000358028 DEFA1P59665 94 aa13.37□□□□□ -0.27
NIPAL3-203ENST00000358028 DEFA3P59666 94 aa13.37□□□□□ -0.27
NIPAL3-203ENST00000358028 KIR2DS3Q14952 304 aa13.37□□□□□ -0.27
NIPAL3-203ENST00000358028 SSX1Q16384 188 aa13.37□□□□□ -0.27
NIPAL3-203ENST00000358028 SPANXN2Q5MJ10 180 aa13.37□□□□□ -0.27
NIPAL3-203ENST00000358028 SLC23A3Q6PIS1 610 aa13.37□□□□□ -0.27
NIPAL3-203ENST00000358028 HMGN2P46Q86SG4 172 aa13.37□□□□□ -0.27
NIPAL3-203ENST00000358028 CYP4Z2PQ8N1L4 340 aa13.37□□□□□ -0.27
NIPAL3-203ENST00000358028 KCT2Q8NC54 265 aa13.37□□□□□ -0.27
NIPAL3-203ENST00000358028 PROKR2Q8NFJ6 384 aa13.37□□□□□ -0.27
NIPAL3-203ENST00000358028 FLVCR1-AS1Q8TAF5 88 aa13.37□□□□□ -0.27
NIPAL3-203ENST00000358028 SLC7A13Q8TCU3 470 aa13.37□□□□□ -0.27
NIPAL3-203ENST00000358028 ELP4Q96EB1 424 aa13.37□□□□□ -0.27
NIPAL3-203ENST00000358028 PRRC1Q96M27 445 aa13.37□□□□□ -0.27
NIPAL3-203ENST00000358028 FCRL4Q96PJ5 515 aa13.37□□□□□ -0.27
NIPAL3-203ENST00000358028 IL4I1Q96RQ9 567 aa13.37□□□□□ -0.27
NIPAL3-203ENST00000358028 CCDC32Q9BV29 185 aa13.37□□□□□ -0.27
NIPAL3-203ENST00000358028 TMEM168Q9H0V1 697 aa13.37□□□□□ -0.27
NIPAL3-203ENST00000358028 CAPN10Q9HC96 672 aa13.37□□□□□ -0.27
NIPAL3-203ENST00000358028 TAS2R16Q9NYV7 291 aa13.37□□□□□ -0.27
NIPAL3-203ENST00000358028 SUSD2Q9UGT4 822 aa13.37□□□□□ -0.27
NIPAL3-203ENST00000358028 ITGB1BP2Q9UKP3 347 aa13.37□□□□□ -0.27
NIPAL3-203ENST00000358028 TRBV23OR9-2A0A075B6M9 112 aa13.36□□□□□ -0.27
NIPAL3-203ENST00000358028 A6NCN8 305 aa13.36□□□□□ -0.27
NIPAL3-203ENST00000358028 KHNYNO15037 678 aaKnown RBP13.36□□□□□ -0.27
NIPAL3-203ENST00000358028 TBX1O43435 398 aa13.36□□□□□ -0.27
NIPAL3-203ENST00000358028 ASNA1O43681 348 aa13.36□□□□□ -0.27
NIPAL3-203ENST00000358028 GDF9O60383 454 aa13.36□□□□□ -0.27
NIPAL3-203ENST00000358028 GNSP15586 552 aa13.36□□□□□ -0.27
NIPAL3-203ENST00000358028 COPZ1P61923 177 aa13.36□□□□□ -0.27
NIPAL3-203ENST00000358028 ZNF91Q05481 1191 aa13.36□□□□□ -0.27
NIPAL3-203ENST00000358028 MLLT11Q13015 90 aaPredicted RBP13.36□□□□□ -0.27
NIPAL3-203ENST00000358028 TARDBPQ13148 414 aaKnown RBP eCLIP13.36□□□□□ -0.279e-7■■■■□ 22
NIPAL3-203ENST00000358028 C1DQ13901 141 aaKnown RBP13.36□□□□□ -0.27
NIPAL3-203ENST00000358028 SPHARQ15513 63 aa13.36□□□□□ -0.27
NIPAL3-203ENST00000358028 STEAP3Q658P3 488 aa13.36□□□□□ -0.27
NIPAL3-203ENST00000358028 CCDC190Q86UF4 302 aa13.36□□□□□ -0.27
NIPAL3-203ENST00000358028 TRIM73Q86UV7 250 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms