RNA–Protein interactions for RNA: ENST00000357604.9

UPF2-202, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF2, Length 5,193 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-202ENST00000357604 V9GYQ6 96 aa8.53□□□□□ -1.04
UPF2-202ENST00000357604 NOL3O60936 208 aaKnown RBP8.52□□□□□ -1.04
UPF2-202ENST00000357604 UBTFL6P0CB48 400 aaPredicted RBP8.52□□□□□ -1.04
UPF2-202ENST00000357604 ATP6V1B2P21281 511 aa8.52□□□□□ -1.04
UPF2-202ENST00000357604 DPP4P27487 766 aa8.52□□□□□ -1.04
UPF2-202ENST00000357604 SSTR4P31391 388 aa8.52□□□□□ -1.04
UPF2-202ENST00000357604 ITGADQ13349 1161 aa8.52□□□□□ -1.04
UPF2-202ENST00000357604 RGNQ15493 299 aa8.52□□□□□ -1.04
UPF2-202ENST00000357604 WBP2NLQ6ICG8 309 aa8.52□□□□□ -1.04
UPF2-202ENST00000357604 CASP12Q6UXS9 341 aa8.52□□□□□ -1.04
UPF2-202ENST00000357604 FBXW8Q8N3Y1 598 aa8.52□□□□□ -1.04
UPF2-202ENST00000357604 RNF175Q8N4F7 328 aa8.52□□□□□ -1.04
UPF2-202ENST00000357604 GRHL3Q8TE85 626 aa8.52□□□□□ -1.04
UPF2-202ENST00000357604 SLC25A43Q8WUT9 341 aaPredicted RBP8.52□□□□□ -1.04
UPF2-202ENST00000357604 OTULINQ96BN8 352 aa8.52□□□□□ -1.04
UPF2-202ENST00000357604 SH3YL1Q96HL8 342 aaPredicted RBP8.52□□□□□ -1.04
UPF2-202ENST00000357604 ADOQ96SZ5 270 aa8.52□□□□□ -1.04
UPF2-202ENST00000357604 CSF3RQ99062 836 aa8.52□□□□□ -1.04
UPF2-202ENST00000357604 NUDT9Q9BW91 350 aa8.52□□□□□ -1.04
UPF2-202ENST00000357604 GPR45Q9Y5Y3 372 aa8.52□□□□□ -1.04
UPF2-202ENST00000357604 PLOD3O60568 738 aa8.52□□□□□ -1.05
UPF2-202ENST00000357604 CBR3O75828 277 aa8.52□□□□□ -1.05
UPF2-202ENST00000357604 ITGAMP11215 1152 aa8.52□□□□□ -1.05
UPF2-202ENST00000357604 TCEA1P23193 301 aaKnown RBP8.52□□□□□ -1.05
UPF2-202ENST00000357604 EVI2BP34910 448 aa8.52□□□□□ -1.05
UPF2-202ENST00000357604 TBR1Q16650 682 aa8.52□□□□□ -1.05
UPF2-202ENST00000357604 OR2A2Q6IF42 318 aa8.52□□□□□ -1.05
UPF2-202ENST00000357604 TCTN3Q6NUS6 607 aa8.52□□□□□ -1.05
UPF2-202ENST00000357604 A4GALTQ9NPC4 353 aa8.52□□□□□ -1.05
UPF2-202ENST00000357604 PLOD2O00469 737 aa8.52□□□□□ -1.05
UPF2-202ENST00000357604 UBFD1O14562 309 aaKnown RBP8.52□□□□□ -1.05
UPF2-202ENST00000357604 HMGN2P05204 90 aaKnown RBP8.52□□□□□ -1.05
UPF2-202ENST00000357604 IDUAP35475 653 aa8.52□□□□□ -1.05
UPF2-202ENST00000357604 PEX19P40855 299 aa8.52□□□□□ -1.05
UPF2-202ENST00000357604 ARHGAP11BQ3KRB8 267 aa8.52□□□□□ -1.05
UPF2-202ENST00000357604 CAMKMTQ7Z624 323 aa8.52□□□□□ -1.05
UPF2-202ENST00000357604 DNAJC9Q8WXX5 260 aa8.52□□□□□ -1.05
UPF2-202ENST00000357604 COQ8BQ96D53 544 aa8.52□□□□□ -1.05
UPF2-202ENST00000357604 NEURL3Q96EH8 262 aa8.52□□□□□ -1.05
UPF2-202ENST00000357604 GIMAP2Q9UG22 337 aa8.52□□□□□ -1.05
UPF2-202ENST00000357604 CDRT15L2A8MXV6 281 aa8.52□□□□□ -1.05
UPF2-202ENST00000357604 LDLRP01130 860 aa8.52□□□□□ -1.05
UPF2-202ENST00000357604 GPX3P22352 226 aa8.52□□□□□ -1.05
UPF2-202ENST00000357604 DSCR4P56555 118 aaPredicted RBP8.52□□□□□ -1.05
UPF2-202ENST00000357604 SRYQ05066 204 aa8.52□□□□□ -1.05
UPF2-202ENST00000357604 TMEM205Q6UW68 189 aa8.52□□□□□ -1.05
UPF2-202ENST00000357604 NET1Q7Z628 596 aaPredicted RBP8.52□□□□□ -1.05
UPF2-202ENST00000357604 POMGNT2Q8NAT1 580 aa8.52□□□□□ -1.05
UPF2-202ENST00000357604 OR10H5Q8NGA6 315 aa8.52□□□□□ -1.05
UPF2-202ENST00000357604 UPB1Q9UBR1 384 aa8.52□□□□□ -1.05
UPF2-202ENST00000357604 ACSL6Q9UKU0 697 aa8.52□□□□□ -1.05
UPF2-202ENST00000357604 ZNF443Q9Y2A4 671 aaPredicted RBP8.52□□□□□ -1.05
UPF2-202ENST00000357604 MYOFQ9NZM1 2061 aa8.52□□□□□ -1.05
UPF2-202ENST00000357604 NUP205Q92621 2012 aa8.51□□□□□ -1.05
UPF2-202ENST00000357604 SERINC4A6NH21 518 aa8.51□□□□□ -1.05
UPF2-202ENST00000357604 NPIPB8E9PQR5 432 aa8.51□□□□□ -1.05
UPF2-202ENST00000357604 ZNF264O43296 627 aa8.51□□□□□ -1.05
UPF2-202ENST00000357604 TMCC2O75069 709 aa8.51□□□□□ -1.05
UPF2-202ENST00000357604 FKBP6O75344 327 aa8.51□□□□□ -1.05
UPF2-202ENST00000357604 ZCCHC18P0CG32 403 aa8.51□□□□□ -1.05
UPF2-202ENST00000357604 COX6A1P12074 109 aa8.51□□□□□ -1.05
UPF2-202ENST00000357604 GSTM3P21266 225 aa8.51□□□□□ -1.05
UPF2-202ENST00000357604 PCGF2P35227 344 aa8.51□□□□□ -1.05
UPF2-202ENST00000357604 ATP6V1E1P36543 226 aa8.51□□□□□ -1.05
UPF2-202ENST00000357604 HSPA13P48723 471 aa8.51□□□□□ -1.05
UPF2-202ENST00000357604 ACTR3P61158 418 aa8.51□□□□□ -1.05
UPF2-202ENST00000357604 SAXO2Q658L1 398 aa8.51□□□□□ -1.05
UPF2-202ENST00000357604 FAM111BQ6SJ93 734 aa8.51□□□□□ -1.05
UPF2-202ENST00000357604 GRAMD2AQ8IUY3 354 aa8.51□□□□□ -1.05
UPF2-202ENST00000357604 NMUR2Q9GZQ4 415 aa8.51□□□□□ -1.05
UPF2-202ENST00000357604 ZNF71Q9NQZ8 489 aaPredicted RBP8.51□□□□□ -1.05
UPF2-202ENST00000357604 TAS2R7Q9NYW3 318 aa8.51□□□□□ -1.05
UPF2-202ENST00000357604 CASQ2O14958 399 aaPredicted RBP8.51□□□□□ -1.05
UPF2-202ENST00000357604 RENP00797 406 aa8.51□□□□□ -1.05
UPF2-202ENST00000357604 GIMD1P0DJR0 217 aa8.51□□□□□ -1.05
UPF2-202ENST00000357604 GABRA1P14867 456 aa8.51□□□□□ -1.05
UPF2-202ENST00000357604 P2RX1P51575 399 aa8.51□□□□□ -1.05
UPF2-202ENST00000357604 MTPNP58546 118 aa8.51□□□□□ -1.05
UPF2-202ENST00000357604 ZNF628Q5EBL2 1059 aa8.51□□□□□ -1.05
UPF2-202ENST00000357604 LCN1P1Q5VSP4 162 aa8.51□□□□□ -1.05
UPF2-202ENST00000357604 MRM1Q6IN84 353 aaKnown RBP8.51□□□□□ -1.05
UPF2-202ENST00000357604 UBE2J2Q8N2K1 259 aa8.51□□□□□ -1.05
UPF2-202ENST00000357604 LAT2Q9GZY6 243 aa8.51□□□□□ -1.05
UPF2-202ENST00000357604 NEK6Q9HC98 313 aa8.51□□□□□ -1.05
UPF2-202ENST00000357604 TESQ9UGI8 421 aaKnown RBP8.51□□□□□ -1.05
UPF2-202ENST00000357604 MED31Q9Y3C7 131 aa8.51□□□□□ -1.05
UPF2-202ENST00000357604 PGRMC2O15173 223 aa8.51□□□□□ -1.05
UPF2-202ENST00000357604 OR10H3O60404 316 aa8.51□□□□□ -1.05
UPF2-202ENST00000357604 KRT36O76013 467 aa8.51□□□□□ -1.05
UPF2-202ENST00000357604 SERPINA1P01009 418 aa8.51□□□□□ -1.05
UPF2-202ENST00000357604 C21orf58P58505 322 aa8.51□□□□□ -1.05
UPF2-202ENST00000357604 SLC35A1P78382 337 aa8.51□□□□□ -1.05
UPF2-202ENST00000357604 FCRLBQ6BAA4 426 aa8.51□□□□□ -1.05
UPF2-202ENST00000357604 RPL13AP3Q6NVV1 102 aa8.51□□□□□ -1.05
UPF2-202ENST00000357604 UNQ6126/PRO20091Q6UXV3 157 aa8.51□□□□□ -1.05
UPF2-202ENST00000357604 LANCL3Q6ZV70 420 aa8.51□□□□□ -1.05
UPF2-202ENST00000357604 NANOGNBQ7Z5D8 188 aa8.51□□□□□ -1.05
UPF2-202ENST00000357604 SERPINA11Q86U17 422 aa8.51□□□□□ -1.05
UPF2-202ENST00000357604 CLECL1Q8IZS7 167 aa8.51□□□□□ -1.05
UPF2-202ENST00000357604 MOSPD2Q8NHP6 518 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms