RNA–Protein interactions for RNA: ENST00000356352.6

UPF2-201, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF2, Length 5,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-201ENST00000356352 SNED1Q8TER0 1413 aa6.13□□□□□ -1.43
UPF2-201ENST00000356352 EEF1E1-BLOC1S5C9J1V9 151 aa6.13□□□□□ -1.43
UPF2-201ENST00000356352 SNAI1O95863 264 aaPredicted RBP6.13□□□□□ -1.43
UPF2-201ENST00000356352 PLATP00750 562 aa6.13□□□□□ -1.43
UPF2-201ENST00000356352 IQCF3P0C7M6 154 aa6.13□□□□□ -1.43
UPF2-201ENST00000356352 PBX2P40425 430 aa6.13□□□□□ -1.43
UPF2-201ENST00000356352 RAB33AQ14088 237 aa6.13□□□□□ -1.43
UPF2-201ENST00000356352 GRB7Q14451 532 aa6.13□□□□□ -1.43
UPF2-201ENST00000356352 GRIN2CQ14957 1233 aa6.13□□□□□ -1.43
UPF2-201ENST00000356352 NPY5RQ15761 445 aa6.13□□□□□ -1.43
UPF2-201ENST00000356352 SLC14A2Q15849 920 aa6.13□□□□□ -1.43
UPF2-201ENST00000356352 MICAQ29983 383 aa6.13□□□□□ -1.43
UPF2-201ENST00000356352 ZNF648Q5T619 568 aaPredicted RBP6.13□□□□□ -1.43
UPF2-201ENST00000356352 METTL11BQ5VVY1 283 aa6.13□□□□□ -1.43
UPF2-201ENST00000356352 FIGNL1Q6PIW4 674 aa6.13□□□□□ -1.43
UPF2-201ENST00000356352 ENPP6Q6UWR7 440 aa6.13□□□□□ -1.43
UPF2-201ENST00000356352 CHDHQ8NE62 594 aaPredicted RBP6.13□□□□□ -1.43
UPF2-201ENST00000356352 OR6Q1Q8NGQ2 317 aa6.13□□□□□ -1.43
UPF2-201ENST00000356352 OR8K5Q8NH50 307 aa6.13□□□□□ -1.43
UPF2-201ENST00000356352 OR1S1Q8NH92 325 aa6.13□□□□□ -1.43
UPF2-201ENST00000356352 ARL11Q969Q4 196 aa6.13□□□□□ -1.43
UPF2-201ENST00000356352 LGALS12Q96DT0 336 aa6.13□□□□□ -1.43
UPF2-201ENST00000356352 TEPSINQ96N21 525 aa6.13□□□□□ -1.43
UPF2-201ENST00000356352 SFXN2Q96NB2 322 aa6.13□□□□□ -1.43
UPF2-201ENST00000356352 TXN2Q99757 166 aa6.13□□□□□ -1.43
UPF2-201ENST00000356352 TMEM246Q9BRR3 403 aa6.13□□□□□ -1.43
UPF2-201ENST00000356352 LMF2Q9BU23 707 aaKnown RBP6.13□□□□□ -1.43
UPF2-201ENST00000356352 HINT2Q9BX68 163 aa6.13□□□□□ -1.43
UPF2-201ENST00000356352 HIPK2Q9H2X6 1198 aa6.13□□□□□ -1.43
UPF2-201ENST00000356352 CWH43Q9H720 699 aa6.13□□□□□ -1.43
UPF2-201ENST00000356352 B3GNT2Q9NY97 397 aa6.13□□□□□ -1.43
UPF2-201ENST00000356352 B3GNT3Q9Y2A9 372 aa6.13□□□□□ -1.43
UPF2-201ENST00000356352 FAM230AA0A1W2PPH8 454 aa6.13□□□□□ -1.43
UPF2-201ENST00000356352 ARGFXA6NJG6 315 aa6.13□□□□□ -1.43
UPF2-201ENST00000356352 SULT1C2O00338 296 aa6.13□□□□□ -1.43
UPF2-201ENST00000356352 RNASET2O00584 256 aaKnown RBP6.13□□□□□ -1.43
UPF2-201ENST00000356352 GOSR2O14653 212 aa6.13□□□□□ -1.43
UPF2-201ENST00000356352 DENRO43583 198 aaKnown RBP6.13□□□□□ -1.43
UPF2-201ENST00000356352 GABBR2O75899 941 aa6.13□□□□□ -1.43
UPF2-201ENST00000356352 F7P08709 466 aaPredicted RBP6.13□□□□□ -1.43
UPF2-201ENST00000356352 SLC35E2BP0CK96 405 aa6.13□□□□□ -1.43
UPF2-201ENST00000356352 BMP4P12644 408 aa6.13□□□□□ -1.43
UPF2-201ENST00000356352 ETFAP13804 333 aa6.13□□□□□ -1.43
UPF2-201ENST00000356352 SLC2A5P22732 501 aa6.13□□□□□ -1.43
UPF2-201ENST00000356352 PRSS3P35030 304 aa6.13□□□□□ -1.43
UPF2-201ENST00000356352 GSCP56915 257 aaPredicted RBP6.13□□□□□ -1.43
UPF2-201ENST00000356352 RAB4BP61018 213 aa6.13□□□□□ -1.43
UPF2-201ENST00000356352 RPL23AP62750 156 aaKnown RBP6.13□□□□□ -1.43
UPF2-201ENST00000356352 TAP2Q03519 686 aa6.13□□□□□ -1.43
UPF2-201ENST00000356352 OLIG2Q13516 323 aa6.13□□□□□ -1.43
UPF2-201ENST00000356352 GK2Q14410 553 aaPredicted RBP6.13□□□□□ -1.43
UPF2-201ENST00000356352 PTPRCAPQ14761 206 aa6.13□□□□□ -1.43
UPF2-201ENST00000356352 PKDCCQ504Y2 493 aa6.13□□□□□ -1.43
UPF2-201ENST00000356352 SLC6A19Q695T7 634 aa6.13□□□□□ -1.43
UPF2-201ENST00000356352 KIF18BQ86Y91 864 aa6.13□□□□□ -1.43
UPF2-201ENST00000356352 GTPBP8Q8N3Z3 284 aaPredicted RBP6.13□□□□□ -1.43
UPF2-201ENST00000356352 SYT14Q8NB59 555 aa6.13□□□□□ -1.43
UPF2-201ENST00000356352 HCAR1Q9BXC0 346 aa6.13□□□□□ -1.43
UPF2-201ENST00000356352 PRMT8Q9NR22 394 aaPredicted RBP6.13□□□□□ -1.43
UPF2-201ENST00000356352 ENPP4Q9Y6X5 453 aa6.13□□□□□ -1.43
UPF2-201ENST00000356352 KIR2DS5A0A0G2JLQ3 304 aa6.12□□□□□ -1.43
UPF2-201ENST00000356352 A0A0G2JNG1 304 aa6.12□□□□□ -1.43
UPF2-201ENST00000356352 SMIM30A4D0T7 59 aa6.12□□□□□ -1.43
UPF2-201ENST00000356352 RNF212BA8MTL3 300 aa6.12□□□□□ -1.43
UPF2-201ENST00000356352 KIR2DS3K7RE56 304 aa6.12□□□□□ -1.43
UPF2-201ENST00000356352 RTCAO00442 366 aaKnown RBP6.12□□□□□ -1.43
UPF2-201ENST00000356352 CRTAPO75718 401 aaPredicted RBP6.12□□□□□ -1.43
UPF2-201ENST00000356352 TSPAN15O95858 294 aa6.12□□□□□ -1.43
UPF2-201ENST00000356352 LCATP04180 440 aa6.12□□□□□ -1.43
UPF2-201ENST00000356352 RETP07949 1114 aa6.12□□□□□ -1.43
UPF2-201ENST00000356352 MYF6P23409 242 aa6.12□□□□□ -1.43
UPF2-201ENST00000356352 CDKN2CP42773 168 aa6.12□□□□□ -1.43
UPF2-201ENST00000356352 THBS3P49746 956 aa6.12□□□□□ -1.43
UPF2-201ENST00000356352 GLO1Q04760 184 aa6.12□□□□□ -1.43
UPF2-201ENST00000356352 C1orf61Q13536 156 aa6.12□□□□□ -1.43
UPF2-201ENST00000356352 KEAP1Q14145 624 aa6.12□□□□□ -1.43
UPF2-201ENST00000356352 KIR2DS5Q14953 304 aa6.12□□□□□ -1.43
UPF2-201ENST00000356352 NDUFAF5Q5TEU4 345 aa6.12□□□□□ -1.43
UPF2-201ENST00000356352 PRAMEF8Q5VWM4 474 aa6.12□□□□□ -1.43
UPF2-201ENST00000356352 PRAMEF7Q5VXH5 474 aa6.12□□□□□ -1.43
UPF2-201ENST00000356352 PSAPL1Q6NUJ1 521 aa6.12□□□□□ -1.43
UPF2-201ENST00000356352 XKR5Q6UX68 686 aa6.12□□□□□ -1.43
UPF2-201ENST00000356352 RPS27LQ71UM5 84 aaKnown RBP6.12□□□□□ -1.43
UPF2-201ENST00000356352 TMEM135Q86UB9 458 aa6.12□□□□□ -1.43
UPF2-201ENST00000356352 OR4N5Q8IXE1 308 aa6.12□□□□□ -1.43
UPF2-201ENST00000356352 CLEC1AQ8NC01 280 aa6.12□□□□□ -1.43
UPF2-201ENST00000356352 OR7G2Q8NG99 324 aa6.12□□□□□ -1.43
UPF2-201ENST00000356352 GPR148Q8TDV2 347 aa6.12□□□□□ -1.43
UPF2-201ENST00000356352 FAM3CQ92520 227 aa6.12□□□□□ -1.43
UPF2-201ENST00000356352 UPRTQ96BW1 309 aa6.12□□□□□ -1.43
UPF2-201ENST00000356352 NGBQ9NPG2 151 aa6.12□□□□□ -1.43
UPF2-201ENST00000356352 FAIMQ9NVQ4 179 aa6.12□□□□□ -1.43
UPF2-201ENST00000356352 GIMAP2Q9UG22 337 aa6.12□□□□□ -1.43
UPF2-201ENST00000356352 KIF25Q9UIL4 384 aa6.12□□□□□ -1.43
UPF2-201ENST00000356352 PSAT1Q9Y617 370 aa6.12□□□□□ -1.43
UPF2-201ENST00000356352 ROBO1Q9Y6N7 1651 aa6.12□□□□□ -1.43
UPF2-201ENST00000356352 CD300LBA8K4G0 201 aa6.12□□□□□ -1.43
UPF2-201ENST00000356352 F5H5P2 479 aa6.12□□□□□ -1.43
UPF2-201ENST00000356352 SERPINA5P05154 406 aa6.12□□□□□ -1.43
UPF2-201ENST00000356352 SERPINE2P07093 398 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms