RNA–Protein interactions for RNA: ENST00000356090.8

NCDN-201, Transcript of neurochondrin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCDN, Length 3,433 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCDN-201ENST00000356090 RASD1Q9Y272 281 aa12.54□□□□□ -0.4
NCDN-201ENST00000356090 GPR55Q9Y2T6 319 aaPredicted RBP12.54□□□□□ -0.4
NCDN-201ENST00000356090 J3QLW9 94 aa12.54□□□□□ -0.4
NCDN-201ENST00000356090 GTPBP1O00178 669 aaKnown RBP12.54□□□□□ -0.4
NCDN-201ENST00000356090 LCMT2O60294 686 aaKnown RBP12.54□□□□□ -0.4
NCDN-201ENST00000356090 C1QBP02746 253 aa12.54□□□□□ -0.4
NCDN-201ENST00000356090 ZNF19P17023 458 aa12.54□□□□□ -0.4
NCDN-201ENST00000356090 BSGP35613 385 aa12.54□□□□□ -0.4
NCDN-201ENST00000356090 MC3RP41968 323 aa12.54□□□□□ -0.4
NCDN-201ENST00000356090 MAPK9P45984 424 aa12.54□□□□□ -0.4
NCDN-201ENST00000356090 ZNF81P51508 661 aa12.54□□□□□ -0.4
NCDN-201ENST00000356090 RPA4Q13156 261 aa12.54□□□□□ -0.4
NCDN-201ENST00000356090 ZNF267Q14586 743 aaPredicted RBP12.54□□□□□ -0.4
NCDN-201ENST00000356090 SF3A2Q15428 464 aaKnown RBP12.54□□□□□ -0.4
NCDN-201ENST00000356090 MINDY4Q4G0A6 757 aa12.54□□□□□ -0.4
NCDN-201ENST00000356090 BICRALQ6AI39 1079 aa12.54□□□□□ -0.4
NCDN-201ENST00000356090 DPPA4Q7L190 304 aa12.54□□□□□ -0.4
NCDN-201ENST00000356090 FAM129CQ86XR2 697 aa12.54□□□□□ -0.4
NCDN-201ENST00000356090 PLCZ1Q86YW0 608 aa12.54□□□□□ -0.4
NCDN-201ENST00000356090 DCUN1D3Q8IWE4 304 aa12.54□□□□□ -0.4
NCDN-201ENST00000356090 IZUMO1Q8IYV9 350 aa12.54□□□□□ -0.4
NCDN-201ENST00000356090 C12orf66Q96MD2 445 aa12.54□□□□□ -0.4
NCDN-201ENST00000356090 C19orf43Q9BQ61 176 aa12.54□□□□□ -0.4
NCDN-201ENST00000356090 TMEM43Q9BTV4 400 aa12.54□□□□□ -0.4
NCDN-201ENST00000356090 MS4A8Q9BY19 250 aa12.54□□□□□ -0.4
NCDN-201ENST00000356090 BTBD1Q9H0C5 482 aa12.54□□□□□ -0.4
NCDN-201ENST00000356090 RHBGQ9H310 441 aa12.54□□□□□ -0.4
NCDN-201ENST00000356090 SEMA4GQ9NTN9 838 aa12.54□□□□□ -0.4
NCDN-201ENST00000356090 ZNF224Q9NZL3 707 aa12.54□□□□□ -0.4
NCDN-201ENST00000356090 PCYT1BQ9Y5K3 369 aaPredicted RBP12.54□□□□□ -0.4
NCDN-201ENST00000356090 KIAA0355O15063 1070 aa12.53□□□□□ -0.4
NCDN-201ENST00000356090 LANCL1O43813 399 aa12.53□□□□□ -0.4
NCDN-201ENST00000356090 ANXA11P50995 505 aaKnown RBP12.53□□□□□ -0.4
NCDN-201ENST00000356090 TPBGQ13641 420 aa12.53□□□□□ -0.4
NCDN-201ENST00000356090 GPR176Q14439 515 aa12.53□□□□□ -0.4
NCDN-201ENST00000356090 SLC9A5Q14940 896 aa12.53□□□□□ -0.4
NCDN-201ENST00000356090 TRAM2Q15035 370 aa12.53□□□□□ -0.4
NCDN-201ENST00000356090 GPR68Q15743 365 aa12.53□□□□□ -0.4
NCDN-201ENST00000356090 PLPP4Q5VZY2 271 aa12.53□□□□□ -0.4
NCDN-201ENST00000356090 ZNF547Q8IVP9 402 aa12.53□□□□□ -0.4
NCDN-201ENST00000356090 CYB561A3Q8NBI2 242 aa12.53□□□□□ -0.4
NCDN-201ENST00000356090 OR4M1Q8NGD0 313 aa12.53□□□□□ -0.4
NCDN-201ENST00000356090 ADAMTS15Q8TE58 950 aa12.53□□□□□ -0.4
NCDN-201ENST00000356090 VOPP1Q96AW1 172 aa12.53□□□□□ -0.4
NCDN-201ENST00000356090 ARHGAP9Q9BRR9 750 aa12.53□□□□□ -0.4
NCDN-201ENST00000356090 EIF3KQ9UBQ5 218 aaKnown RBP12.53□□□□□ -0.4
NCDN-201ENST00000356090 SLC23A2Q9UGH3 650 aa12.53□□□□□ -0.4
NCDN-201ENST00000356090 SOD1P00441 154 aa12.53□□□□□ -0.4
NCDN-201ENST00000356090 GYPBP06028 91 aa12.53□□□□□ -0.4
NCDN-201ENST00000356090 HLA-DMAP28067 261 aa12.53□□□□□ -0.4
NCDN-201ENST00000356090 ABATP80404 500 aa12.53□□□□□ -0.4
NCDN-201ENST00000356090 ST3GAL3Q11203 375 aa12.53□□□□□ -0.4
NCDN-201ENST00000356090 PLA2G15Q8NCC3 412 aa12.53□□□□□ -0.4
NCDN-201ENST00000356090 GNPDA2Q8TDQ7 276 aa12.53□□□□□ -0.4
NCDN-201ENST00000356090 GANCQ8TET4 914 aa12.53□□□□□ -0.4
NCDN-201ENST00000356090 MSANTD3Q96H12 275 aa12.53□□□□□ -0.4
NCDN-201ENST00000356090 SENP5Q96HI0 755 aaPredicted RBP12.53□□□□□ -0.4
NCDN-201ENST00000356090 AMDHD1Q96NU7 426 aa12.53□□□□□ -0.4
NCDN-201ENST00000356090 DEFB118Q96PH6 123 aa12.53□□□□□ -0.4
NCDN-201ENST00000356090 KLHL31Q9H511 634 aa12.53□□□□□ -0.4
NCDN-201ENST00000356090 KLHL21Q9UJP4 597 aa12.53□□□□□ -0.4
NCDN-201ENST00000356090 KCNK6Q9Y257 313 aa12.53□□□□□ -0.4
NCDN-201ENST00000356090 CNTRLQ7Z7A1 2325 aa12.53□□□□□ -0.4
NCDN-201ENST00000356090 A0A1W2PRG6 482 aa12.53□□□□□ -0.4
NCDN-201ENST00000356090 IRGMA1A4Y4 181 aa12.53□□□□□ -0.4
NCDN-201ENST00000356090 SAGP10523 405 aaPredicted RBP12.53□□□□□ -0.4
NCDN-201ENST00000356090 ID2Q02363 134 aa12.53□□□□□ -0.4
NCDN-201ENST00000356090 ARHGAP15Q53QZ3 475 aa12.53□□□□□ -0.4
NCDN-201ENST00000356090 TCEAL5Q5H9L2 206 aa12.53□□□□□ -0.4
NCDN-201ENST00000356090 C18orf63Q68DL7 685 aa12.53□□□□□ -0.4
NCDN-201ENST00000356090 ESPNLQ6ZVH7 1005 aa12.53□□□□□ -0.4
NCDN-201ENST00000356090 OR4N5Q8IXE1 308 aa12.53□□□□□ -0.4
NCDN-201ENST00000356090 ZNF671Q8TAW3 534 aa12.53□□□□□ -0.4
NCDN-201ENST00000356090 TMEM255BQ8WV15 326 aa12.53□□□□□ -0.4
NCDN-201ENST00000356090 DPH1Q9BZG8 443 aa12.53□□□□□ -0.4
NCDN-201ENST00000356090 CLEC4MQ9H2X3 399 aaPredicted RBP12.53□□□□□ -0.4
NCDN-201ENST00000356090 PAK6Q9NQU5 681 aaPredicted RBP12.53□□□□□ -0.4
NCDN-201ENST00000356090 MAN2C1Q9NTJ4 1040 aa12.53□□□□□ -0.4
NCDN-201ENST00000356090 TESQ9UGI8 421 aaKnown RBP12.53□□□□□ -0.4
NCDN-201ENST00000356090 HELZP42694 1942 aaKnown RBP12.53□□□□□ -0.4
NCDN-201ENST00000356090 C5orf42Q9H799 3197 aa12.52□□□□□ -0.4
NCDN-201ENST00000356090 TRBV23OR9-2A0A075B6M9 112 aa12.52□□□□□ -0.4
NCDN-201ENST00000356090 A0A0B4J203 849 aa12.52□□□□□ -0.4
NCDN-201ENST00000356090 TMEM129A0AVI4 362 aa12.52□□□□□ -0.4
NCDN-201ENST00000356090 CTSAP10619 480 aa12.52□□□□□ -0.4
NCDN-201ENST00000356090 PRG2P13727 222 aa12.52□□□□□ -0.4
NCDN-201ENST00000356090 HOXB3P14651 431 aaPredicted RBP12.52□□□□□ -0.4
NCDN-201ENST00000356090 BMP7P18075 431 aa12.52□□□□□ -0.4
NCDN-201ENST00000356090 POU3F3P20264 500 aaPredicted RBP12.52□□□□□ -0.4
NCDN-201ENST00000356090 LTB4RQ15722 352 aa12.52□□□□□ -0.4
NCDN-201ENST00000356090 OR4C11Q6IEV9 310 aa12.52□□□□□ -0.4
NCDN-201ENST00000356090 RPTNQ6XPR3 784 aa12.52□□□□□ -0.4
NCDN-201ENST00000356090 CXXC5Q7LFL8 322 aaKnown RBP12.52□□□□□ -0.4
NCDN-201ENST00000356090 CEACAM19Q7Z692 300 aa12.52□□□□□ -0.4
NCDN-201ENST00000356090 REM2Q8IYK8 340 aaPredicted RBP12.52□□□□□ -0.4
NCDN-201ENST00000356090 OR9A2Q8NGT5 310 aa12.52□□□□□ -0.4
NCDN-201ENST00000356090 CXorf40AQ8TE69 158 aa12.52□□□□□ -0.4
NCDN-201ENST00000356090 A0A0A6YYJ9 748 aa12.52□□□□□ -0.41
NCDN-201ENST00000356090 TRDV1A0A1B0GX56 115 aa12.52□□□□□ -0.41
NCDN-201ENST00000356090 GNB5O14775 395 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms