RNA–Protein interactions for RNA: ENST00000355815.8

SREBF1-202, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SREBF1, Length 4,253 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-202ENST00000355815 RGMAQ96B86 450 aa13.29□□□□□ -0.28
SREBF1-202ENST00000355815 METTL8Q9H825 291 aaKnown RBP13.29□□□□□ -0.28
SREBF1-202ENST00000355815 F8W036 122 aa13.29□□□□□ -0.28
SREBF1-202ENST00000355815 SSX5O60225 188 aa13.29□□□□□ -0.28
SREBF1-202ENST00000355815 BLOC1S1P78537 153 aa13.29□□□□□ -0.28
SREBF1-202ENST00000355815 EIF4EBP2Q13542 120 aaPredicted RBP13.29□□□□□ -0.28
SREBF1-202ENST00000355815 FCN2Q15485 313 aa13.29□□□□□ -0.28
SREBF1-202ENST00000355815 PLAG1Q6DJT9 500 aa13.29□□□□□ -0.28
SREBF1-202ENST00000355815 PLBD1Q6P4A8 553 aa13.29□□□□□ -0.28
SREBF1-202ENST00000355815 JAZF1Q86VZ6 243 aa13.29□□□□□ -0.28
SREBF1-202ENST00000355815 ZNF761Q86XN6 746 aaPredicted RBP13.29□□□□□ -0.28
SREBF1-202ENST00000355815 JAGN1Q8N5M9 183 aa13.29□□□□□ -0.28
SREBF1-202ENST00000355815 ZNF514Q96K75 400 aaPredicted RBP13.29□□□□□ -0.28
SREBF1-202ENST00000355815 CST11Q9H112 138 aa13.29□□□□□ -0.28
SREBF1-202ENST00000355815 PPA2Q9H2U2 334 aa13.29□□□□□ -0.28
SREBF1-202ENST00000355815 MED31Q9Y3C7 131 aa13.29□□□□□ -0.28
SREBF1-202ENST00000355815 TCRBV5S2A0A599 114 aa13.28□□□□□ -0.28
SREBF1-202ENST00000355815 CREBL2O60519 120 aaPredicted RBP13.28□□□□□ -0.28
SREBF1-202ENST00000355815 ALPPP05187 535 aa13.28□□□□□ -0.28
SREBF1-202ENST00000355815 ADORA3P0DMS8 318 aa13.28□□□□□ -0.28
SREBF1-202ENST00000355815 LIPCP11150 499 aa13.28□□□□□ -0.28
SREBF1-202ENST00000355815 ESCO2Q56NI9 601 aa13.28□□□□□ -0.28
SREBF1-202ENST00000355815 TRIM46Q7Z4K8 759 aa13.28□□□□□ -0.28
SREBF1-202ENST00000355815 SLC7A6Q92536 515 aa13.28□□□□□ -0.28
SREBF1-202ENST00000355815 FATE1Q969F0 183 aa13.28□□□□□ -0.28
SREBF1-202ENST00000355815 ARSGQ96EG1 525 aa13.28□□□□□ -0.28
SREBF1-202ENST00000355815 QRSL1Q9H0R6 528 aaKnown RBP13.28□□□□□ -0.28
SREBF1-202ENST00000355815 RDH14Q9HBH5 336 aa13.28□□□□□ -0.28
SREBF1-202ENST00000355815 VNN3Q9NY84 501 aa13.28□□□□□ -0.28
SREBF1-202ENST00000355815 GTF2F2P13984 249 aa13.28□□□□□ -0.28
SREBF1-202ENST00000355815 GPR4P46093 362 aa13.28□□□□□ -0.28
SREBF1-202ENST00000355815 MTNR1AP48039 350 aa13.28□□□□□ -0.28
SREBF1-202ENST00000355815 SOX9P48436 509 aa13.28□□□□□ -0.28
SREBF1-202ENST00000355815 DNASE1L1P49184 302 aa13.28□□□□□ -0.28
SREBF1-202ENST00000355815 ZNF630Q2M218 657 aaPredicted RBP13.28□□□□□ -0.28
SREBF1-202ENST00000355815 HLA-DQA1Q5Y7H0 255 aa13.28□□□□□ -0.28
SREBF1-202ENST00000355815 SLC36A4Q6YBV0 504 aa13.28□□□□□ -0.28
SREBF1-202ENST00000355815 PDZD3Q86UT5 571 aa13.28□□□□□ -0.28
SREBF1-202ENST00000355815 TMEM17Q86X19 198 aa13.28□□□□□ -0.28
SREBF1-202ENST00000355815 DCUN1D3Q8IWE4 304 aa13.28□□□□□ -0.28
SREBF1-202ENST00000355815 DENND6BQ8NEG7 585 aa13.28□□□□□ -0.28
SREBF1-202ENST00000355815 OR2L2Q8NH16 312 aa13.28□□□□□ -0.28
SREBF1-202ENST00000355815 DPH7Q9BTV6 452 aa13.28□□□□□ -0.28
SREBF1-202ENST00000355815 METTL17Q9H7H0 456 aaPredicted RBP13.28□□□□□ -0.28
SREBF1-202ENST00000355815 NMNAT1Q9HAN9 279 aaPredicted RBP13.28□□□□□ -0.28
SREBF1-202ENST00000355815 IFT46Q9NQC8 304 aa13.28□□□□□ -0.28
SREBF1-202ENST00000355815 RLIMQ9NVW2 624 aa13.28□□□□□ -0.28
SREBF1-202ENST00000355815 SLC27A6Q9Y2P4 619 aa13.28□□□□□ -0.28
SREBF1-202ENST00000355815 MCIDASD6RGH6 385 aa13.28□□□□□ -0.28
SREBF1-202ENST00000355815 ADRB3P13945 408 aa13.28□□□□□ -0.28
SREBF1-202ENST00000355815 SPNP16150 400 aa13.28□□□□□ -0.28
SREBF1-202ENST00000355815 MASP1P48740 699 aa13.28□□□□□ -0.28
SREBF1-202ENST00000355815 ADARB1P78563 741 aaKnown RBP13.28□□□□□ -0.28
SREBF1-202ENST00000355815 AIMP2Q13155 320 aaKnown RBP13.28□□□□□ -0.28
SREBF1-202ENST00000355815 SIMC1Q8NDZ2 872 aa13.28□□□□□ -0.28
SREBF1-202ENST00000355815 TMEM185AQ8NFB2 350 aa13.28□□□□□ -0.28
SREBF1-202ENST00000355815 OR2L5Q8NG80 312 aa13.28□□□□□ -0.28
SREBF1-202ENST00000355815 ZNF563Q8TA94 476 aa13.28□□□□□ -0.28
SREBF1-202ENST00000355815 TESCQ96BS2 214 aa13.28□□□□□ -0.28
SREBF1-202ENST00000355815 S100A16Q96FQ6 103 aaKnown RBP13.28□□□□□ -0.28
SREBF1-202ENST00000355815 SRMSQ9H3Y6 488 aa13.28□□□□□ -0.28
SREBF1-202ENST00000355815 P2RX2Q9UBL9 471 aa13.28□□□□□ -0.28
SREBF1-202ENST00000355815 SPTBP11277 2137 aa13.28□□□□□ -0.28
SREBF1-202ENST00000355815 FZD6O60353 706 aa13.27□□□□□ -0.28
SREBF1-202ENST00000355815 SOX30O94993 753 aa13.27□□□□□ -0.28
SREBF1-202ENST00000355815 ACVR2AP27037 513 aa13.27□□□□□ -0.28
SREBF1-202ENST00000355815 ACADLP28330 430 aa13.27□□□□□ -0.28
SREBF1-202ENST00000355815 KIAA1024LP59773 190 aa13.27□□□□□ -0.28
SREBF1-202ENST00000355815 PRR5P85299 388 aa13.27□□□□□ -0.28
SREBF1-202ENST00000355815 E2F1Q01094 437 aa13.27□□□□□ -0.28
SREBF1-202ENST00000355815 GAB1Q13480 694 aa13.27□□□□□ -0.28
SREBF1-202ENST00000355815 NNATQ16517 81 aa13.27□□□□□ -0.28
SREBF1-202ENST00000355815 ZNF689Q96CS4 500 aaPredicted RBP13.27□□□□□ -0.28
SREBF1-202ENST00000355815 RBM38Q9H0Z9 239 aaKnown RBP13.27□□□□□ -0.28
SREBF1-202ENST00000355815 ZNF304Q9HCX3 659 aa13.27□□□□□ -0.28
SREBF1-202ENST00000355815 PRMT8Q9NR22 394 aaPredicted RBP13.27□□□□□ -0.28
SREBF1-202ENST00000355815 ASF1BQ9NVP2 202 aa13.27□□□□□ -0.28
SREBF1-202ENST00000355815 HS3ST2Q9Y278 367 aa13.27□□□□□ -0.28
SREBF1-202ENST00000355815 PRMT3O60678 531 aa13.27□□□□□ -0.28
SREBF1-202ENST00000355815 CDC123O75794 336 aaPredicted RBP13.27□□□□□ -0.28
SREBF1-202ENST00000355815 MT-ND4P03905 459 aa13.27□□□□□ -0.28
SREBF1-202ENST00000355815 APEHP13798 732 aaKnown RBP13.27□□□□□ -0.28
SREBF1-202ENST00000355815 TYRP1P17643 537 aa13.27□□□□□ -0.28
SREBF1-202ENST00000355815 PTH2RP49190 550 aa13.27□□□□□ -0.28
SREBF1-202ENST00000355815 ILF3Q12906 894 aaKnown RBP eCLIP13.27□□□□□ -0.28
SREBF1-202ENST00000355815 DEFB134Q4QY38 66 aa13.27□□□□□ -0.28
SREBF1-202ENST00000355815 TMEM107Q6UX40 140 aa13.27□□□□□ -0.28
SREBF1-202ENST00000355815 C3P1Q6ZMU1 363 aa13.27□□□□□ -0.28
SREBF1-202ENST00000355815 OR4K5Q8NGD3 323 aa13.27□□□□□ -0.28
SREBF1-202ENST00000355815 HAVCR1Q96D42 359 aa13.27□□□□□ -0.28
SREBF1-202ENST00000355815 SLC28A3Q9HAS3 691 aa13.27□□□□□ -0.28
SREBF1-202ENST00000355815 UPB1Q9UBR1 384 aa13.27□□□□□ -0.28
SREBF1-202ENST00000355815 HSPE1-MOB4S4R3N1 261 aa13.27□□□□□ -0.28
SREBF1-202ENST00000355815 EDDM13A0A1B0GTR0 161 aa13.27□□□□□ -0.29
SREBF1-202ENST00000355815 MEIS3P1A6NDR6 274 aa13.27□□□□□ -0.29
SREBF1-202ENST00000355815 EEF1E1-BLOC1S5C9J1V9 151 aa13.27□□□□□ -0.29
SREBF1-202ENST00000355815 PDCD5O14737 125 aa13.27□□□□□ -0.29
SREBF1-202ENST00000355815 ARPC1BO15143 372 aaKnown RBP13.27□□□□□ -0.29
SREBF1-202ENST00000355815 CD2P06729 351 aa13.27□□□□□ -0.29
SREBF1-202ENST00000355815 FBXO45P0C2W1 286 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms