RNA–Protein interactions for RNA: ENST00000355766.5

VPS13A-201, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 3

Gene VPS13A, Length 753 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-201ENST00000355766 CMTM6Q9NX76 183 aa6.49□□□□□ -1.37
VPS13A-201ENST00000355766 THUMPD1Q9NXG2 353 aaKnown RBP6.49□□□□□ -1.37
VPS13A-201ENST00000355766 RARRES3Q9UL19 164 aa6.49□□□□□ -1.37
VPS13A-201ENST00000355766 OSGIN2Q9Y236 505 aa6.49□□□□□ -1.37
VPS13A-201ENST00000355766 FARSAQ9Y285 508 aaKnown RBP6.49□□□□□ -1.37
VPS13A-201ENST00000355766 NPFFR2Q9Y5X5 522 aa6.49□□□□□ -1.37
VPS13A-201ENST00000355766 A0A1B0GUH1 482 aa6.48□□□□□ -1.37
VPS13A-201ENST00000355766 A8MUI8 341 aa6.48□□□□□ -1.37
VPS13A-201ENST00000355766 ISM1B1AKI9 464 aa6.48□□□□□ -1.37
VPS13A-201ENST00000355766 H0YJX3 145 aa6.48□□□□□ -1.37
VPS13A-201ENST00000355766 BTN3A3O00478 584 aa6.48□□□□□ -1.37
VPS13A-201ENST00000355766 HAT1O14929 419 aa6.48□□□□□ -1.37
VPS13A-201ENST00000355766 ARPC2O15144 300 aa6.48□□□□□ -1.37
VPS13A-201ENST00000355766 KIF1CO43896 1103 aaKnown RBP6.48□□□□□ -1.37
VPS13A-201ENST00000355766 SRPX2O60687 465 aaPredicted RBP6.48□□□□□ -1.37
VPS13A-201ENST00000355766 UBXN7O94888 489 aa6.48□□□□□ -1.37
VPS13A-201ENST00000355766 ALPPP05187 535 aa6.48□□□□□ -1.37
VPS13A-201ENST00000355766 STSP08842 583 aa6.48□□□□□ -1.37
VPS13A-201ENST00000355766 ANPEPP15144 967 aa6.48□□□□□ -1.37
VPS13A-201ENST00000355766 CD1EP15812 388 aa6.48□□□□□ -1.37
VPS13A-201ENST00000355766 NELFEP18615 380 aaKnown RBP6.48□□□□□ -1.37
VPS13A-201ENST00000355766 GGT1P19440 569 aa6.48□□□□□ -1.37
VPS13A-201ENST00000355766 PSMB5P28074 263 aa6.48□□□□□ -1.37
VPS13A-201ENST00000355766 VHLP40337 213 aa6.48□□□□□ -1.37
VPS13A-201ENST00000355766 PTDSS1P48651 473 aaKnown RBP6.48□□□□□ -1.37
VPS13A-201ENST00000355766 ANXA11P50995 505 aaKnown RBP6.48□□□□□ -1.37
VPS13A-201ENST00000355766 CLCN2P51788 898 aa6.48□□□□□ -1.37
VPS13A-201ENST00000355766 RRADP55042 308 aa6.48□□□□□ -1.37
VPS13A-201ENST00000355766 WNT3P56703 355 aa6.48□□□□□ -1.37
VPS13A-201ENST00000355766 LIPEQ05469 1076 aa6.48□□□□□ -1.37
VPS13A-201ENST00000355766 RBBP4Q09028 425 aa6.48□□□□□ -1.37
VPS13A-201ENST00000355766 VEZF1Q14119 521 aa6.48□□□□□ -1.37
VPS13A-201ENST00000355766 ICAM4Q14773 271 aa6.48□□□□□ -1.37
VPS13A-201ENST00000355766 CDSNQ15517 529 aa6.48□□□□□ -1.37
VPS13A-201ENST00000355766 CEBPEQ15744 281 aa6.48□□□□□ -1.37
VPS13A-201ENST00000355766 ZC3H12BQ5HYM0 836 aaKnown RBP6.48□□□□□ -1.37
VPS13A-201ENST00000355766 CCNYL2Q5T2Q4 361 aa6.48□□□□□ -1.37
VPS13A-201ENST00000355766 GARNL3Q5VVW2 1013 aa6.48□□□□□ -1.37
VPS13A-201ENST00000355766 OR4C11Q6IEV9 310 aa6.48□□□□□ -1.37
VPS13A-201ENST00000355766 BHLHB9Q6PI77 547 aa6.48□□□□□ -1.37
VPS13A-201ENST00000355766 IGFL3Q6UXB1 125 aa6.48□□□□□ -1.37
VPS13A-201ENST00000355766 TMEM64Q6YI46 380 aa6.48□□□□□ -1.37
VPS13A-201ENST00000355766 ZNF517Q6ZMY9 492 aaPredicted RBP6.48□□□□□ -1.37
VPS13A-201ENST00000355766 ABHD13Q7L211 337 aa6.48□□□□□ -1.37
VPS13A-201ENST00000355766 ADCK2Q7Z695 626 aa6.48□□□□□ -1.37
VPS13A-201ENST00000355766 ASPGQ86U10 573 aa6.48□□□□□ -1.37
VPS13A-201ENST00000355766 FJX1Q86VR8 437 aa6.48□□□□□ -1.37
VPS13A-201ENST00000355766 CALHM3Q86XJ0 350 aa6.48□□□□□ -1.37
VPS13A-201ENST00000355766 KMT5CQ86Y97 462 aa6.48□□□□□ -1.37
VPS13A-201ENST00000355766 KRTCAP2Q8N6L1 136 aa6.48□□□□□ -1.37
VPS13A-201ENST00000355766 METTL25Q8N6Q8 603 aa6.48□□□□□ -1.37
VPS13A-201ENST00000355766 FAM47BQ8NA70 645 aa6.48□□□□□ -1.37
VPS13A-201ENST00000355766 PAPD5Q8NDF8 572 aaKnown RBP6.48□□□□□ -1.37
VPS13A-201ENST00000355766 ZNF740Q8NDX6 193 aa6.48□□□□□ -1.37
VPS13A-201ENST00000355766 OR2T12Q8NG77 320 aa6.48□□□□□ -1.37
VPS13A-201ENST00000355766 OR4E2Q8NGC2 313 aa6.48□□□□□ -1.37
VPS13A-201ENST00000355766 ZFP28Q8NHY6 868 aa6.48□□□□□ -1.37
VPS13A-201ENST00000355766 SLC26A7Q8TE54 656 aa6.48□□□□□ -1.37
VPS13A-201ENST00000355766 C16orf78Q8WTQ4 265 aa6.48□□□□□ -1.37
VPS13A-201ENST00000355766 RERGQ96A58 199 aaPredicted RBP6.48□□□□□ -1.37
VPS13A-201ENST00000355766 MTFMTQ96DP5 389 aaKnown RBP6.48□□□□□ -1.37
VPS13A-201ENST00000355766 MS4A6EQ96DS6 147 aa6.48□□□□□ -1.37
VPS13A-201ENST00000355766 TM4SF19Q96DZ7 209 aa6.48□□□□□ -1.37
VPS13A-201ENST00000355766 ZBED6CLQ96FA7 236 aaPredicted RBP6.48□□□□□ -1.37
VPS13A-201ENST00000355766 RSRC1Q96IZ7 334 aaKnown RBP6.48□□□□□ -1.37
VPS13A-201ENST00000355766 ZNF285Q96NJ3 590 aa6.48□□□□□ -1.37
VPS13A-201ENST00000355766 OR2A5Q96R48 311 aa6.48□□□□□ -1.37
VPS13A-201ENST00000355766 PANX1Q96RD7 426 aa6.48□□□□□ -1.37
VPS13A-201ENST00000355766 ZFYVE21Q9BQ24 234 aa6.48□□□□□ -1.37
VPS13A-201ENST00000355766 ECSITQ9BQ95 431 aa6.48□□□□□ -1.37
VPS13A-201ENST00000355766 NPLQ9BXD5 320 aaPredicted RBP6.48□□□□□ -1.37
VPS13A-201ENST00000355766 VCXQ9H320 206 aa6.48□□□□□ -1.37
VPS13A-201ENST00000355766 OR51B5Q9H339 312 aa6.48□□□□□ -1.37
VPS13A-201ENST00000355766 XKR8Q9H6D3 395 aa6.48□□□□□ -1.37
VPS13A-201ENST00000355766 MAGIXQ9H6Y5 334 aa6.48□□□□□ -1.37
VPS13A-201ENST00000355766 YY1AP1Q9H869 796 aa6.48□□□□□ -1.37
VPS13A-201ENST00000355766 LYRM4Q9HD34 91 aa6.48□□□□□ -1.37
VPS13A-201ENST00000355766 CCM2LQ9NUG4 571 aaPredicted RBP6.48□□□□□ -1.37
VPS13A-201ENST00000355766 OLAHQ9NV23 265 aa6.48□□□□□ -1.37
VPS13A-201ENST00000355766 SPHK1Q9NYA1 384 aa6.48□□□□□ -1.37
VPS13A-201ENST00000355766 TAS2R9Q9NYW1 312 aa6.48□□□□□ -1.37
VPS13A-201ENST00000355766 VAPAQ9P0L0 249 aa6.48□□□□□ -1.37
VPS13A-201ENST00000355766 SEMA5BQ9P283 1151 aa6.48□□□□□ -1.37
VPS13A-201ENST00000355766 MYOTQ9UBF9 498 aa6.48□□□□□ -1.37
VPS13A-201ENST00000355766 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.48□□□□□ -1.37
VPS13A-201ENST00000355766 CIDEBQ9UHD4 219 aa6.48□□□□□ -1.37
VPS13A-201ENST00000355766 PHF11Q9UIL8 331 aa6.48□□□□□ -1.37
VPS13A-201ENST00000355766 PCDHGB4Q9UN71 923 aa6.48□□□□□ -1.37
VPS13A-201ENST00000355766 SLC22A7Q9Y694 548 aa6.48□□□□□ -1.37
VPS13A-201ENST00000355766 TACC2O95359 2948 aa6.48□□□□□ -1.37
VPS13A-201ENST00000355766 DHRS12A0PJE2 317 aa6.47□□□□□ -1.37
VPS13A-201ENST00000355766 C1orf226A1L170 272 aa6.47□□□□□ -1.37
VPS13A-201ENST00000355766 ELOVL7A1L3X0 281 aa6.47□□□□□ -1.37
VPS13A-201ENST00000355766 OR6C74A6NCV1 312 aa6.47□□□□□ -1.37
VPS13A-201ENST00000355766 TLCD2A6NGC4 264 aa6.47□□□□□ -1.37
VPS13A-201ENST00000355766 GABRR3A8MPY1 467 aa6.47□□□□□ -1.37
VPS13A-201ENST00000355766 H3BNX3 289 aa6.47□□□□□ -1.37
VPS13A-201ENST00000355766 PDPK1O15530 556 aa6.47□□□□□ -1.37
VPS13A-201ENST00000355766 CYP7B1O75881 506 aa6.47□□□□□ -1.37
VPS13A-201ENST00000355766 KRT36O76013 467 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms