RNA–Protein interactions for RNA: ENST00000354636.7

HMGA2-201, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best) BASIC

Gene HMGA2, Length 1,529 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-201ENST00000354636 EXTL1Q92935 676 aa22.34■■□□□ 1.17
HMGA2-201ENST00000354636 LRMDAQ9H2I8 198 aa22.34■■□□□ 1.17
HMGA2-201ENST00000354636 MRTO4Q9UKD2 239 aaKnown RBP22.34■■□□□ 1.17
HMGA2-201ENST00000354636 GSC2O15499 205 aa22.33■■□□□ 1.17
HMGA2-201ENST00000354636 ALPPP05187 535 aa22.33■■□□□ 1.17
HMGA2-201ENST00000354636 BCHEP06276 602 aa22.33■■□□□ 1.17
HMGA2-201ENST00000354636 FBXO45P0C2W1 286 aa22.33■■□□□ 1.17
HMGA2-201ENST00000354636 SOX3P41225 446 aa22.33■■□□□ 1.17
HMGA2-201ENST00000354636 CDK6Q00534 326 aa22.33■■□□□ 1.17
HMGA2-201ENST00000354636 CEACAM7Q14002 265 aa22.33■■□□□ 1.17
HMGA2-201ENST00000354636 CPEB4Q17RY0 729 aaKnown RBP eCLIP22.33■■□□□ 1.17
HMGA2-201ENST00000354636 VMACQ2NL98 169 aa22.33■■□□□ 1.17
HMGA2-201ENST00000354636 SPATS1Q496A3 300 aa22.33■■□□□ 1.17
HMGA2-201ENST00000354636 GPAT3Q53EU6 434 aa22.33■■□□□ 1.17
HMGA2-201ENST00000354636 C19orf48Q6RUI8 117 aa22.33■■□□□ 1.17
HMGA2-201ENST00000354636 LINC00696Q6ZRV3 163 aa22.33■■□□□ 1.17
HMGA2-201ENST00000354636 ASRGL1Q7L266 308 aa22.33■■□□□ 1.17
HMGA2-201ENST00000354636 GALNT10Q86SR1 603 aa22.33■■□□□ 1.17
HMGA2-201ENST00000354636 C11orf65Q8NCR3 313 aa22.33■■□□□ 1.17
HMGA2-201ENST00000354636 ASB15Q8WXK1 588 aa22.33■■□□□ 1.17
HMGA2-201ENST00000354636 EFHD2Q96C19 240 aaPredicted RBP22.33■■□□□ 1.17
HMGA2-201ENST00000354636 TMEM19Q96HH6 336 aa22.33■■□□□ 1.17
HMGA2-201ENST00000354636 THTPAQ9BU02 230 aa22.33■■□□□ 1.17
HMGA2-201ENST00000354636 G6PC3Q9BUM1 346 aa22.33■■□□□ 1.17
HMGA2-201ENST00000354636 ZNF350Q9GZX5 532 aa22.33■■□□□ 1.17
HMGA2-201ENST00000354636 ABI3Q9P2A4 366 aa22.33■■□□□ 1.17
HMGA2-201ENST00000354636 TMEM247A6NEH6 219 aa22.32■■□□□ 1.16
HMGA2-201ENST00000354636 OR6C70A6NIJ9 312 aa22.32■■□□□ 1.16
HMGA2-201ENST00000354636 SLC28A2O43868 658 aa22.32■■□□□ 1.16
HMGA2-201ENST00000354636 FCMRO60667 390 aa22.32■■□□□ 1.16
HMGA2-201ENST00000354636 STX11O75558 287 aa22.32■■□□□ 1.16
HMGA2-201ENST00000354636 REM1O75628 298 aa22.32■■□□□ 1.16
HMGA2-201ENST00000354636 PPM1BO75688 479 aa22.32■■□□□ 1.16
HMGA2-201ENST00000354636 DNAJC8O75937 253 aaPredicted RBP22.32■■□□□ 1.16
HMGA2-201ENST00000354636 OR6B1O95007 311 aa22.32■■□□□ 1.16
HMGA2-201ENST00000354636 ITGB2P05107 769 aa22.32■■□□□ 1.16
HMGA2-201ENST00000354636 CHRM4P08173 479 aa22.32■■□□□ 1.16
HMGA2-201ENST00000354636 GUSBP08236 651 aa22.32■■□□□ 1.16
HMGA2-201ENST00000354636 HSD17B1P14061 328 aa22.32■■□□□ 1.16
HMGA2-201ENST00000354636 KRT20P35900 424 aa22.32■■□□□ 1.16
HMGA2-201ENST00000354636 TMED10P49755 219 aaKnown RBP22.32■■□□□ 1.16
HMGA2-201ENST00000354636 ST13P50502 369 aaKnown RBP22.32■■□□□ 1.16
HMGA2-201ENST00000354636 PNLIPRP2P54317 469 aa22.32■■□□□ 1.16
HMGA2-201ENST00000354636 PSMD4P55036 377 aaKnown RBP22.32■■□□□ 1.16
HMGA2-201ENST00000354636 MFAP5Q13361 173 aa22.32■■□□□ 1.16
HMGA2-201ENST00000354636 SCARB2Q14108 478 aa22.32■■□□□ 1.16
HMGA2-201ENST00000354636 GNA13Q14344 377 aa22.32■■□□□ 1.16
HMGA2-201ENST00000354636 ZNF791Q3KP31 576 aaPredicted RBP22.32■■□□□ 1.16
HMGA2-201ENST00000354636 ZNF468Q5VIY5 522 aaPredicted RBP22.32■■□□□ 1.16
HMGA2-201ENST00000354636 ERICH5Q6P6B1 374 aa22.32■■□□□ 1.16
HMGA2-201ENST00000354636 ZAR1Q86SH2 424 aa22.32■■□□□ 1.16
HMGA2-201ENST00000354636 TMEM156Q8N614 296 aa22.32■■□□□ 1.16
HMGA2-201ENST00000354636 NFKBIDQ8NI38 313 aa22.32■■□□□ 1.16
HMGA2-201ENST00000354636 ADOQ96SZ5 270 aa22.32■■□□□ 1.16
HMGA2-201ENST00000354636 CADM1Q9BY67 442 aaKnown RBP22.32■■□□□ 1.16
HMGA2-201ENST00000354636 SLC38A1Q9H2H9 487 aa22.32■■□□□ 1.16
HMGA2-201ENST00000354636 RUBCNLQ9H714 662 aa22.32■■□□□ 1.16
HMGA2-201ENST00000354636 ZBTB20Q9HC78 741 aaPredicted RBP22.32■■□□□ 1.16
HMGA2-201ENST00000354636 SEC23IPQ9Y6Y8 1000 aaKnown RBP22.32■■□□□ 1.16
HMGA2-201ENST00000354636 ELOVL7A1L3X0 281 aa22.31■■□□□ 1.16
HMGA2-201ENST00000354636 CDK2AP1O14519 115 aa22.31■■□□□ 1.16
HMGA2-201ENST00000354636 ZIC2O95409 532 aaPredicted RBP22.31■■□□□ 1.16
HMGA2-201ENST00000354636 H6PDO95479 791 aa22.31■■□□□ 1.16
HMGA2-201ENST00000354636 RFX3P48380 749 aa22.31■■□□□ 1.16
HMGA2-201ENST00000354636 CRISP3P54108 245 aa22.31■■□□□ 1.16
HMGA2-201ENST00000354636 NTRK2Q16620 822 aa22.31■■□□□ 1.16
HMGA2-201ENST00000354636 ST3GAL2Q16842 350 aa22.31■■□□□ 1.16
HMGA2-201ENST00000354636 LRRC74BQ6ZQY2 392 aa22.31■■□□□ 1.16
HMGA2-201ENST00000354636 OLIG3Q7RTU3 272 aa22.31■■□□□ 1.16
HMGA2-201ENST00000354636 SPACA9Q96E40 222 aaPredicted RBP22.31■■□□□ 1.16
HMGA2-201ENST00000354636 SMAD5Q99717 465 aaKnown RBP22.31■■□□□ 1.16
HMGA2-201ENST00000354636 KCTD14Q9BQ13 255 aaPredicted RBP22.31■■□□□ 1.16
HMGA2-201ENST00000354636 SAP130Q9H0E3 1048 aa22.31■■□□□ 1.16
HMGA2-201ENST00000354636 POLE3Q9NRF9 147 aa22.31■■□□□ 1.16
HMGA2-201ENST00000354636 CALML5Q9NZT1 146 aa22.31■■□□□ 1.16
HMGA2-201ENST00000354636 WDR45Q9Y484 360 aa22.31■■□□□ 1.16
HMGA2-201ENST00000354636 ZNF451Q9Y4E5 1061 aa22.31■■□□□ 1.16
HMGA2-201ENST00000354636 PCDHGA9Q9Y5G4 932 aaKnown RBP22.31■■□□□ 1.16
HMGA2-201ENST00000354636 ABCB7O75027 752 aa22.31■■□□□ 1.16
HMGA2-201ENST00000354636 UGT2B11O75310 529 aa22.31■■□□□ 1.16
HMGA2-201ENST00000354636 HTR1EP28566 365 aa22.31■■□□□ 1.16
HMGA2-201ENST00000354636 IL12BP29460 328 aa22.31■■□□□ 1.16
HMGA2-201ENST00000354636 PCGF2P35227 344 aa22.31■■□□□ 1.16
HMGA2-201ENST00000354636 VEZF1Q14119 521 aa22.31■■□□□ 1.16
HMGA2-201ENST00000354636 PRAMEF8Q5VWM4 474 aa22.31■■□□□ 1.16
HMGA2-201ENST00000354636 PRAMEF7Q5VXH5 474 aa22.31■■□□□ 1.16
HMGA2-201ENST00000354636 DESI1Q6ICB0 168 aa22.31■■□□□ 1.16
HMGA2-201ENST00000354636 TYW3Q6IPR3 259 aaKnown RBP22.31■■□□□ 1.16
HMGA2-201ENST00000354636 REEP3Q6NUK4 255 aa22.31■■□□□ 1.16
HMGA2-201ENST00000354636 IGFL2Q6UWQ7 119 aa22.31■■□□□ 1.16
HMGA2-201ENST00000354636 IL20RBQ6UXL0 311 aa22.31■■□□□ 1.16
HMGA2-201ENST00000354636 FRRS1Q6ZNA5 592 aa22.31■■□□□ 1.16
HMGA2-201ENST00000354636 MICU2Q8IYU8 434 aa22.31■■□□□ 1.16
HMGA2-201ENST00000354636 DND1Q8IYX4 353 aaKnown RBP22.31■■□□□ 1.16
HMGA2-201ENST00000354636 FAM156AQ8NDB6 213 aa22.31■■□□□ 1.16
HMGA2-201ENST00000354636 HIPK4Q8NE63 616 aa22.31■■□□□ 1.16
HMGA2-201ENST00000354636 COL21A1Q96P44 957 aa22.31■■□□□ 1.16
HMGA2-201ENST00000354636 TREX2Q9BQ50 279 aaPredicted RBP22.31■■□□□ 1.16
HMGA2-201ENST00000354636 PRORYQ9H606 182 aa22.31■■□□□ 1.16
HMGA2-201ENST00000354636 BCL2L10Q9HD36 194 aa22.31■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms