RNA–Protein interactions for RNA: ENST00000353442.9

LMBR1-201, Transcript of limb development membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMBR1, Length 7,997 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-201ENST00000353442 CHRDQ9H2X0 955 aa12.76□□□□□ -0.37
LMBR1-201ENST00000353442 ZNF446Q9NWS9 450 aa12.76□□□□□ -0.37
LMBR1-201ENST00000353442 SLC23A2Q9UGH3 650 aa12.76□□□□□ -0.37
LMBR1-201ENST00000353442 ITSN1Q15811 1721 aa12.76□□□□□ -0.37
LMBR1-201ENST00000353442 A8MXE2 369 aa12.76□□□□□ -0.37
LMBR1-201ENST00000353442 SIGLEC6O43699 453 aa12.76□□□□□ -0.37
LMBR1-201ENST00000353442 MRPL33O75394 65 aaKnown RBP12.76□□□□□ -0.37
LMBR1-201ENST00000353442 YIF1AO95070 293 aa12.76□□□□□ -0.37
LMBR1-201ENST00000353442 MAP2K4P45985 399 aa12.76□□□□□ -0.37
LMBR1-201ENST00000353442 IDH3GP51553 393 aaPredicted RBP12.76□□□□□ -0.37
LMBR1-201ENST00000353442 MBTPS1Q14703 1052 aa12.76□□□□□ -0.37
LMBR1-201ENST00000353442 BATF2Q8N1L9 274 aa12.76□□□□□ -0.37
LMBR1-201ENST00000353442 ZADH2Q8N4Q0 377 aa12.76□□□□□ -0.37
LMBR1-201ENST00000353442 TEPSINQ96N21 525 aa12.76□□□□□ -0.37
LMBR1-201ENST00000353442 DCLRE1CQ96SD1 692 aaKnown RBP12.76□□□□□ -0.37
LMBR1-201ENST00000353442 FAM163BP0C2L3 166 aa12.75□□□□□ -0.37
LMBR1-201ENST00000353442 CST9LP1Q5W188 147 aa12.75□□□□□ -0.37
LMBR1-201ENST00000353442 MTMR14Q8NCE2 650 aa12.75□□□□□ -0.37
LMBR1-201ENST00000353442 OR5L1Q8NGL2 311 aa12.75□□□□□ -0.37
LMBR1-201ENST00000353442 FBXL20Q96IG2 436 aa12.75□□□□□ -0.37
LMBR1-201ENST00000353442 TP63Q9H3D4 680 aaPredicted RBP12.75□□□□□ -0.37
LMBR1-201ENST00000353442 SDHAF2Q9NX18 166 aa12.75□□□□□ -0.37
LMBR1-201ENST00000353442 AQP7O14520 342 aa12.75□□□□□ -0.37
LMBR1-201ENST00000353442 AGPAT2O15120 278 aa12.75□□□□□ -0.37
LMBR1-201ENST00000353442 STSP08842 583 aa12.75□□□□□ -0.37
LMBR1-201ENST00000353442 RHCEP18577 417 aa12.75□□□□□ -0.37
LMBR1-201ENST00000353442 PRDX6P30041 224 aa12.75□□□□□ -0.37
LMBR1-201ENST00000353442 OR1D4P47884 311 aa12.75□□□□□ -0.37
LMBR1-201ENST00000353442 VASPP50552 380 aaPredicted RBP12.75□□□□□ -0.37
LMBR1-201ENST00000353442 HSD17B7P56937 341 aa12.75□□□□□ -0.37
LMBR1-201ENST00000353442 PTCRAQ6ISU1 281 aaPredicted RBP12.75□□□□□ -0.37
LMBR1-201ENST00000353442 PPP1R3BQ86XI6 285 aa12.75□□□□□ -0.37
LMBR1-201ENST00000353442 CCDC71LQ8N9Z2 235 aa12.75□□□□□ -0.37
LMBR1-201ENST00000353442 OR5AK2Q8NH90 309 aa12.75□□□□□ -0.37
LMBR1-201ENST00000353442 ZNF516Q92618 1163 aa12.75□□□□□ -0.37
LMBR1-201ENST00000353442 PFDN5Q99471 154 aa12.75□□□□□ -0.37
LMBR1-201ENST00000353442 UTP23Q9BRU9 249 aaKnown RBP12.75□□□□□ -0.37
LMBR1-201ENST00000353442 POMPQ9Y244 141 aa12.75□□□□□ -0.37
LMBR1-201ENST00000353442 A0A1W2PPV4 95 aa12.75□□□□□ -0.37
LMBR1-201ENST00000353442 TP53P04637 393 aaPredicted RBP12.75□□□□□ -0.37
LMBR1-201ENST00000353442 BORAQ6PGQ7 559 aa12.75□□□□□ -0.37
LMBR1-201ENST00000353442 CREB3L1Q96BA8 519 aa12.75□□□□□ -0.37
LMBR1-201ENST00000353442 SYT3Q9BQG1 590 aa12.75□□□□□ -0.37
LMBR1-201ENST00000353442 BCAT2O15382 392 aaPredicted RBP12.75□□□□□ -0.37
LMBR1-201ENST00000353442 LIPJQ5W064 366 aa12.75□□□□□ -0.37
LMBR1-201ENST00000353442 HDHD5Q9BXW7 423 aa12.75□□□□□ -0.37
LMBR1-201ENST00000353442 A0A0U1RQS6 177 aa12.75□□□□□ -0.37
LMBR1-201ENST00000353442 TSPAN33Q86UF1 283 aa12.75□□□□□ -0.37
LMBR1-201ENST00000353442 RTP3Q9BQQ7 232 aa12.75□□□□□ -0.37
LMBR1-201ENST00000353442 OR10A5Q9H207 317 aa12.75□□□□□ -0.37
LMBR1-201ENST00000353442 OR10A2Q9H208 303 aa12.75□□□□□ -0.37
LMBR1-201ENST00000353442 TM7SF3Q9NS93 570 aa12.75□□□□□ -0.37
LMBR1-201ENST00000353442 MEIS3P2A8K0S8 358 aa12.75□□□□□ -0.37
LMBR1-201ENST00000353442 CD70P32970 193 aa12.75□□□□□ -0.37
LMBR1-201ENST00000353442 CSNK1EP49674 416 aaKnown RBP12.75□□□□□ -0.37
LMBR1-201ENST00000353442 ELAVL3Q14576 367 aaKnown RBP12.75□□□□□ -0.37
LMBR1-201ENST00000353442 PTGR1Q14914 329 aa12.75□□□□□ -0.37
LMBR1-201ENST00000353442 SLC27A4Q6P1M0 643 aa12.75□□□□□ -0.37
LMBR1-201ENST00000353442 GRPEL2Q8TAA5 225 aa12.75□□□□□ -0.37
LMBR1-201ENST00000353442 BIRC7Q96CA5 298 aa12.75□□□□□ -0.37
LMBR1-201ENST00000353442 USP36Q9P275 1121 aaKnown RBP12.75□□□□□ -0.37
LMBR1-201ENST00000353442 DLGAP1O14490 977 aa12.75□□□□□ -0.37
LMBR1-201ENST00000353442 PVRP15151 417 aa12.75□□□□□ -0.37
LMBR1-201ENST00000353442 GSK3AP49840 483 aa12.75□□□□□ -0.37
LMBR1-201ENST00000353442 SGSHP51688 502 aa12.75□□□□□ -0.37
LMBR1-201ENST00000353442 OR52E8Q6IFG1 317 aa12.75□□□□□ -0.37
LMBR1-201ENST00000353442 NXPE4Q6UWF7 544 aa12.75□□□□□ -0.37
LMBR1-201ENST00000353442 UBAC2Q8NBM4 344 aa12.75□□□□□ -0.37
LMBR1-201ENST00000353442 OPA3Q9H6K4 179 aa12.75□□□□□ -0.37
LMBR1-201ENST00000353442 HSPB11Q9Y547 144 aa12.75□□□□□ -0.37
LMBR1-201ENST00000353442 M0R233 179 aa12.74□□□□□ -0.37
LMBR1-201ENST00000353442 TNFRSF1BP20333 461 aa12.74□□□□□ -0.37
LMBR1-201ENST00000353442 ADH6P28332 368 aa12.74□□□□□ -0.37
LMBR1-201ENST00000353442 EDDM3AQ14507 147 aa12.74□□□□□ -0.37
LMBR1-201ENST00000353442 PXKQ7Z7A4 578 aa12.74□□□□□ -0.37
LMBR1-201ENST00000353442 CHST14Q8NCH0 376 aa12.74□□□□□ -0.37
LMBR1-201ENST00000353442 TMEM104Q8NE00 496 aa12.74□□□□□ -0.37
LMBR1-201ENST00000353442 TRMT2BQ96GJ1 504 aaKnown RBP12.74□□□□□ -0.37
LMBR1-201ENST00000353442 APOOQ9BUR5 198 aa12.74□□□□□ -0.37
LMBR1-201ENST00000353442 PINK1Q9BXM7 581 aa12.74□□□□□ -0.37
LMBR1-201ENST00000353442 DERL2Q9GZP9 239 aa12.74□□□□□ -0.37
LMBR1-201ENST00000353442 ZIM2Q9NZV7 527 aa12.74□□□□□ -0.37
LMBR1-201ENST00000353442 TRAPPC2LH3BP13 241 aa12.74□□□□□ -0.37
LMBR1-201ENST00000353442 DFNA5O60443 496 aa12.74□□□□□ -0.37
LMBR1-201ENST00000353442 SCO1O75880 301 aa12.74□□□□□ -0.37
LMBR1-201ENST00000353442 MT-ND2P03891 347 aa12.74□□□□□ -0.37
LMBR1-201ENST00000353442 DRD1P21728 446 aa12.74□□□□□ -0.37
LMBR1-201ENST00000353442 ELK4P28324 431 aa12.74□□□□□ -0.37
LMBR1-201ENST00000353442 FAM217AQ8IXS0 508 aa12.74□□□□□ -0.37
LMBR1-201ENST00000353442 NSUN5Q96P11 429 aaKnown RBP12.74□□□□□ -0.37
LMBR1-201ENST00000353442 PTGDR2Q9Y5Y4 395 aa12.74□□□□□ -0.37
LMBR1-201ENST00000353442 CACNA1FO60840 1977 aa12.74□□□□□ -0.37
LMBR1-201ENST00000353442 CDK2P24941 298 aa12.74□□□□□ -0.37
LMBR1-201ENST00000353442 RPS5P46782 204 aaKnown RBP12.74□□□□□ -0.37
LMBR1-201ENST00000353442 PPP1R3AQ16821 1122 aa12.74□□□□□ -0.37
LMBR1-201ENST00000353442 LCTLQ6UWM7 567 aa12.74□□□□□ -0.37
LMBR1-201ENST00000353442 SLC35F5Q8WV83 523 aa12.74□□□□□ -0.37
LMBR1-201ENST00000353442 IGSF8Q969P0 613 aa12.74□□□□□ -0.37
LMBR1-201ENST00000353442 DUSP23Q9BVJ7 150 aa12.74□□□□□ -0.37
LMBR1-201ENST00000353442 GAREM1Q9H706 876 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms