RNA–Protein interactions for RNA: ENST00000351677.6

PTPN11-201, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPN11, Length 6,101 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-201ENST00000351677 ALG8Q9BVK2 526 aa15.13■□□□□ 0.01
PTPN11-201ENST00000351677 NUFIP1Q9UHK0 495 aaKnown RBP15.13■□□□□ 0.01
PTPN11-201ENST00000351677 HHLA1C9JL84 531 aa15.13■□□□□ 0.01
PTPN11-201ENST00000351677 PRAMEF2O60811 474 aa15.13■□□□□ 0.01
PTPN11-201ENST00000351677 RP2O75695 350 aa15.13■□□□□ 0.01
PTPN11-201ENST00000351677 IRF4Q15306 451 aa15.13■□□□□ 0.01
PTPN11-201ENST00000351677 TSC22D1Q15714 1073 aa15.13■□□□□ 0.01
PTPN11-201ENST00000351677 PDLIM5Q96HC4 596 aaKnown RBP15.13■□□□□ 0.01
PTPN11-201ENST00000351677 SACM1LQ9NTJ5 587 aa15.13■□□□□ 0.01
PTPN11-201ENST00000351677 CUEDC1Q9NWM3 386 aaPredicted RBP15.13■□□□□ 0.01
PTPN11-201ENST00000351677 NPC1O15118 1278 aa15.13■□□□□ 0.01
PTPN11-201ENST00000351677 RDH16O75452 317 aa15.13■□□□□ 0.01
PTPN11-201ENST00000351677 CA5AP35218 305 aa15.13■□□□□ 0.01
PTPN11-201ENST00000351677 FAM43BQ6ZT52 329 aaPredicted RBP15.13■□□□□ 0.01
PTPN11-201ENST00000351677 B3GNT8Q7Z7M8 397 aa15.13■□□□□ 0.01
PTPN11-201ENST00000351677 UBQLNLQ8IYU4 475 aa15.13■□□□□ 0.01
PTPN11-201ENST00000351677 ZNF619Q8N2I2 560 aa15.13■□□□□ 0.01
PTPN11-201ENST00000351677 OR10A4Q9H209 315 aa15.13■□□□□ 0.01
PTPN11-201ENST00000351677 CWH43Q9H720 699 aa15.13■□□□□ 0.01
PTPN11-201ENST00000351677 ACOT13Q9NPJ3 140 aa15.13■□□□□ 0.01
PTPN11-201ENST00000351677 C7orf72A4D263 438 aa15.12■□□□□ 0.01
PTPN11-201ENST00000351677 NUDT7P0C024 238 aa15.12■□□□□ 0.01
PTPN11-201ENST00000351677 DNASE1P24855 282 aa15.12■□□□□ 0.01
PTPN11-201ENST00000351677 PRLHRP49683 370 aa15.12■□□□□ 0.01
PTPN11-201ENST00000351677 EMX1Q04741 257 aaPredicted RBP15.12■□□□□ 0.01
PTPN11-201ENST00000351677 TP53I3Q53FA7 332 aa15.12■□□□□ 0.01
PTPN11-201ENST00000351677 Q6ZSR6 202 aa15.12■□□□□ 0.01
PTPN11-201ENST00000351677 MS4A15Q8N5U1 240 aa15.12■□□□□ 0.01
PTPN11-201ENST00000351677 PGAM5Q96HS1 289 aa15.12■□□□□ 0.01
PTPN11-201ENST00000351677 SFTPBP07988 381 aa15.12■□□□□ 0.01
PTPN11-201ENST00000351677 LBX1P52954 281 aa15.12■□□□□ 0.01
PTPN11-201ENST00000351677 HBA1P69905 142 aa15.12■□□□□ 0.01
PTPN11-201ENST00000351677 CHRFAM7AQ494W8 412 aa15.12■□□□□ 0.01
PTPN11-201ENST00000351677 IGFN1Q86VF2 1251 aa15.12■□□□□ 0.01
PTPN11-201ENST00000351677 PRR22Q8IZ63 422 aa15.12■□□□□ 0.01
PTPN11-201ENST00000351677 OR2T4Q8NH00 348 aa15.12■□□□□ 0.01
PTPN11-201ENST00000351677 ELP5Q8TE02 316 aa15.12■□□□□ 0.01
PTPN11-201ENST00000351677 KCNN1Q92952 543 aa15.12■□□□□ 0.01
PTPN11-201ENST00000351677 ZNF84P51523 738 aa15.12■□□□□ 0.01
PTPN11-201ENST00000351677 LRIF1Q5T3J3 769 aa15.12■□□□□ 0.01
PTPN11-201ENST00000351677 SSX6Q7RTT6 188 aa15.12■□□□□ 0.01
PTPN11-201ENST00000351677 CHDHQ8NE62 594 aaPredicted RBP15.12■□□□□ 0.01
PTPN11-201ENST00000351677 ZNF717Q9BY31 904 aaPredicted RBP15.12■□□□□ 0.01
PTPN11-201ENST00000351677 C8orf33Q9H7E9 229 aaPredicted RBP15.12■□□□□ 0.01
PTPN11-201ENST00000351677 FTSJ1Q9UET6 329 aa15.12■□□□□ 0.01
PTPN11-201ENST00000351677 M0R036 132 aa15.12■□□□□ 0.01
PTPN11-201ENST00000351677 PRLP01236 227 aa15.12■□□□□ 0.01
PTPN11-201ENST00000351677 PROS1P07225 676 aa15.12■□□□□ 0.01
PTPN11-201ENST00000351677 ENDOUP21128 410 aaKnown RBP15.12■□□□□ 0.01
PTPN11-201ENST00000351677 TACR1P25103 407 aa15.12■□□□□ 0.01
PTPN11-201ENST00000351677 FAM76BQ5HYJ3 339 aa15.12■□□□□ 0.01
PTPN11-201ENST00000351677 ZNF691Q5VV52 312 aa15.12■□□□□ 0.01
PTPN11-201ENST00000351677 CBLL1Q75N03 491 aa15.12■□□□□ 0.01
PTPN11-201ENST00000351677 CDRT4Q8N9R6 151 aa15.12■□□□□ 0.01
PTPN11-201ENST00000351677 TRMT10AQ8TBZ6 339 aaKnown RBP15.12■□□□□ 0.01
PTPN11-201ENST00000351677 SLC5A7Q9GZV3 580 aa15.12■□□□□ 0.01
PTPN11-201ENST00000351677 FKBP14Q9NWM8 211 aa15.12■□□□□ 0.01
PTPN11-201ENST00000351677 UBFD1O14562 309 aaKnown RBP15.11■□□□□ 0.01
PTPN11-201ENST00000351677 ZNF806P0C7X5 589 aa15.11■□□□□ 0.01
PTPN11-201ENST00000351677 SYNPOQ8N3V7 929 aa15.11■□□□□ 0.01
PTPN11-201ENST00000351677 SYT14Q8NB59 555 aa15.11■□□□□ 0.01
PTPN11-201ENST00000351677 FGF13Q92913 245 aa15.11■□□□□ 0.01
PTPN11-201ENST00000351677 SLC22A12Q96S37 553 aa15.11■□□□□ 0.01
PTPN11-201ENST00000351677 ITGB4P16144 1822 aa15.11■□□□□ 0.01
PTPN11-201ENST00000351677 VSTM2BA6NLU5 285 aa15.11■□□□□ 0.01
PTPN11-201ENST00000351677 CLEC3AO75596 197 aa15.11■□□□□ 0.01
PTPN11-201ENST00000351677 FARS2O95363 451 aaKnown RBP15.11■□□□□ 0.01
PTPN11-201ENST00000351677 CYP17A1P05093 508 aa15.11■□□□□ 0.01
PTPN11-201ENST00000351677 ART1P52961 327 aa15.11■□□□□ 0.01
PTPN11-201ENST00000351677 HNRNPKP61978 463 aaKnown RBP eCLIP15.11■□□□□ 0.01
PTPN11-201ENST00000351677 DRAXINQ8NBI3 349 aaPredicted RBP15.11■□□□□ 0.01
PTPN11-201ENST00000351677 NT5C3BQ969T7 300 aa15.11■□□□□ 0.01
PTPN11-201ENST00000351677 AIFM2Q9BRQ8 373 aa15.11■□□□□ 0.01
PTPN11-201ENST00000351677 CACNG6Q9BXT2 260 aa15.11■□□□□ 0.01
PTPN11-201ENST00000351677 RANBP3Q9H6Z4 567 aaPredicted RBP15.11■□□□□ 0.01
PTPN11-201ENST00000351677 A0A0A6YYC8 382 aaPredicted RBP15.11■□□□□ 0.01
PTPN11-201ENST00000351677 I3L1I5 382 aaPredicted RBP15.11■□□□□ 0.01
PTPN11-201ENST00000351677 RIN1Q13671 783 aa15.11■□□□□ 0.01
PTPN11-201ENST00000351677 MRPL43Q8N983 215 aaKnown RBP15.11■□□□□ 0.01
PTPN11-201ENST00000351677 ZFP90Q8TF47 636 aa15.11■□□□□ 0.01
PTPN11-201ENST00000351677 ASB12Q8WXK4 309 aa15.11■□□□□ 0.01
PTPN11-201ENST00000351677 PITX2Q99697 317 aa15.11■□□□□ 0.01
PTPN11-201ENST00000351677 SSTR4P31391 388 aa15.11■□□□□ 0.01
PTPN11-201ENST00000351677 RBMXP38159 391 aaKnown RBP15.11■□□□□ 0.01
PTPN11-201ENST00000351677 SMN1Q16637 294 aaKnown RBP15.11■□□□□ 0.01
PTPN11-201ENST00000351677 PGM2L1Q6PCE3 622 aa15.11■□□□□ 0.01
PTPN11-201ENST00000351677 BAIAP2L2Q6UXY1 529 aa15.11■□□□□ 0.01
PTPN11-201ENST00000351677 MAMDC2Q7Z304 686 aaPredicted RBP15.11■□□□□ 0.01
PTPN11-201ENST00000351677 PLXDC1Q8IUK5 500 aa15.11■□□□□ 0.01
PTPN11-201ENST00000351677 FAM3CQ92520 227 aa15.11■□□□□ 0.01
PTPN11-201ENST00000351677 SPATA6Q9NWH7 488 aaPredicted RBP15.11■□□□□ 0.01
PTPN11-201ENST00000351677 ATE1O95260 518 aa15.11■□□□□ 0.01
PTPN11-201ENST00000351677 ITGAMP11215 1152 aa15.11■□□□□ 0.01
PTPN11-201ENST00000351677 C21orf33P30042 268 aaPredicted RBP15.11■□□□□ 0.01
PTPN11-201ENST00000351677 SLC5A12Q1EHB4 618 aa15.11■□□□□ 0.01
PTPN11-201ENST00000351677 NLGN4XQ8N0W4 816 aa15.11■□□□□ 0.01
PTPN11-201ENST00000351677 TMEM239Q8WW34 195 aa15.11■□□□□ 0.01
PTPN11-201ENST00000351677 KLHL42Q9P2K6 505 aa15.11■□□□□ 0.01
PTPN11-201ENST00000351677 PLCH1Q4KWH8 1693 aa15.11■□□□□ 0.01
PTPN11-201ENST00000351677 CCDC58Q4VC31 144 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms