RNA–Protein interactions for RNA: ENST00000349748.7

CAPN3-203, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-203ENST00000349748 NAA11Q9BSU3 229 aaPredicted RBP10.02□□□□□ -0.8
CAPN3-203ENST00000349748 FUZQ9BT04 418 aa10.02□□□□□ -0.8
CAPN3-203ENST00000349748 CXCL16Q9H2A7 254 aa10.02□□□□□ -0.8
CAPN3-203ENST00000349748 FN3KQ9H479 309 aa10.02□□□□□ -0.8
CAPN3-203ENST00000349748 CREBZFQ9NS37 354 aa10.02□□□□□ -0.8
CAPN3-203ENST00000349748 PLEKHA6Q9Y2H5 1048 aa10.02□□□□□ -0.8
CAPN3-203ENST00000349748 RPL36Q9Y3U8 105 aaKnown RBP10.02□□□□□ -0.8
CAPN3-203ENST00000349748 OR6C76A6NM76 312 aa10.02□□□□□ -0.81
CAPN3-203ENST00000349748 HEPACAM2A8MVW5 462 aa10.02□□□□□ -0.81
CAPN3-203ENST00000349748 UPK3BL1B0FP48 263 aa10.02□□□□□ -0.81
CAPN3-203ENST00000349748 UPK3BL2E5RIL1 263 aa10.02□□□□□ -0.81
CAPN3-203ENST00000349748 TSPAN3O60637 253 aa10.02□□□□□ -0.81
CAPN3-203ENST00000349748 PRMT3O60678 531 aa10.02□□□□□ -0.81
CAPN3-203ENST00000349748 LILRB5O75023 590 aa10.02□□□□□ -0.81
CAPN3-203ENST00000349748 SLC34A2O95436 690 aa10.02□□□□□ -0.81
CAPN3-203ENST00000349748 C22orf31O95567 290 aa10.02□□□□□ -0.81
CAPN3-203ENST00000349748 PEX11BO96011 259 aa10.02□□□□□ -0.81
CAPN3-203ENST00000349748 HIST1H2ABP04908 130 aa10.02□□□□□ -0.81
CAPN3-203ENST00000349748 GIPP09681 153 aaPredicted RBP10.02□□□□□ -0.81
CAPN3-203ENST00000349748 STAG3L1P0CL83 205 aa10.02□□□□□ -0.81
CAPN3-203ENST00000349748 ZNF35P13682 527 aa10.02□□□□□ -0.81
CAPN3-203ENST00000349748 ABCD3P28288 659 aa10.02□□□□□ -0.81
CAPN3-203ENST00000349748 NOS3P29474 1203 aa10.02□□□□□ -0.81
CAPN3-203ENST00000349748 WNT4P56705 351 aa10.02□□□□□ -0.81
CAPN3-203ENST00000349748 ZNF33AQ06730 810 aa10.02□□□□□ -0.81
CAPN3-203ENST00000349748 ELAVL2Q12926 359 aaKnown RBP10.02□□□□□ -0.81
CAPN3-203ENST00000349748 PEA15Q15121 130 aa10.02□□□□□ -0.81
CAPN3-203ENST00000349748 TGIF1Q15583 401 aa10.02□□□□□ -0.81
CAPN3-203ENST00000349748 PGAP1Q75T13 922 aa10.02□□□□□ -0.81
CAPN3-203ENST00000349748 HIST3H2AQ7L7L0 130 aa10.02□□□□□ -0.81
CAPN3-203ENST00000349748 GOLGA7Q7Z5G4 137 aa10.02□□□□□ -0.81
CAPN3-203ENST00000349748 CTU1Q7Z7A3 348 aaKnown RBP10.02□□□□□ -0.81
CAPN3-203ENST00000349748 OR1S2Q8NGQ3 325 aa10.02□□□□□ -0.81
CAPN3-203ENST00000349748 OR6B3Q8NGW1 331 aa10.02□□□□□ -0.81
CAPN3-203ENST00000349748 HIST1H2ACQ93077 130 aa10.02□□□□□ -0.81
CAPN3-203ENST00000349748 MAPKAP1Q9BPZ7 522 aa10.02□□□□□ -0.81
CAPN3-203ENST00000349748 DERL2Q9GZP9 239 aa10.02□□□□□ -0.81
CAPN3-203ENST00000349748 MFSD1Q9H3U5 465 aa10.02□□□□□ -0.81
CAPN3-203ENST00000349748 FZD8Q9H461 694 aa10.02□□□□□ -0.81
CAPN3-203ENST00000349748 TMEM231Q9H6L2 316 aa10.02□□□□□ -0.81
CAPN3-203ENST00000349748 RBM22Q9NW64 420 aaKnown RBP eCLIP10.02□□□□□ -0.81
CAPN3-203ENST00000349748 LAMP5Q9UJQ1 280 aa10.02□□□□□ -0.81
CAPN3-203ENST00000349748 CA14Q9ULX7 337 aa10.02□□□□□ -0.81
CAPN3-203ENST00000349748 WASF3Q9UPY6 502 aa10.02□□□□□ -0.81
CAPN3-203ENST00000349748 MED16Q9Y2X0 877 aa10.02□□□□□ -0.81
CAPN3-203ENST00000349748 SCN1AP35498 2009 aa10.02□□□□□ -0.81
CAPN3-203ENST00000349748 OR2M5A3KFT3 312 aa10.02□□□□□ -0.81
CAPN3-203ENST00000349748 BTBD17A6NE02 478 aa10.02□□□□□ -0.81
CAPN3-203ENST00000349748 ZNF879B4DU55 563 aa10.02□□□□□ -0.81
CAPN3-203ENST00000349748 ARPC1BO15143 372 aaKnown RBP10.02□□□□□ -0.81
CAPN3-203ENST00000349748 ULK1O75385 1050 aa10.02□□□□□ -0.81
CAPN3-203ENST00000349748 ITGA3P26006 1051 aa10.02□□□□□ -0.81
CAPN3-203ENST00000349748 GABRA5P31644 462 aa10.02□□□□□ -0.81
CAPN3-203ENST00000349748 SLC1A3P43003 542 aa10.02□□□□□ -0.81
CAPN3-203ENST00000349748 VEGFBP49765 207 aa10.02□□□□□ -0.81
CAPN3-203ENST00000349748 RNF144AP50876 292 aaPredicted RBP10.02□□□□□ -0.81
CAPN3-203ENST00000349748 RAB2AP61019 212 aa10.02□□□□□ -0.81
CAPN3-203ENST00000349748 RAP2BP61225 183 aa10.02□□□□□ -0.81
CAPN3-203ENST00000349748 MAXP61244 160 aa10.02□□□□□ -0.81
CAPN3-203ENST00000349748 TOMM20Q15388 145 aa10.02□□□□□ -0.81
CAPN3-203ENST00000349748 PYY3Q5JQD4 70 aa10.02□□□□□ -0.81
CAPN3-203ENST00000349748 OAFQ86UD1 273 aa10.02□□□□□ -0.81
CAPN3-203ENST00000349748 GPSM1Q86YR5 675 aa10.02□□□□□ -0.81
CAPN3-203ENST00000349748 CARFQ8N187 725 aa10.02□□□□□ -0.81
CAPN3-203ENST00000349748 MEIOBQ8N635 442 aa10.02□□□□□ -0.81
CAPN3-203ENST00000349748 RNASE11Q8TAA1 199 aaKnown RBP10.02□□□□□ -0.81
CAPN3-203ENST00000349748 S100PBPQ96BU1 408 aa10.02□□□□□ -0.81
CAPN3-203ENST00000349748 RBM18Q96H35 190 aaKnown RBP10.02□□□□□ -0.81
CAPN3-203ENST00000349748 SCLYQ96I15 445 aa10.02□□□□□ -0.81
CAPN3-203ENST00000349748 ART5Q96L15 291 aa10.02□□□□□ -0.81
CAPN3-203ENST00000349748 NPY6RQ99463 290 aa10.02□□□□□ -0.81
CAPN3-203ENST00000349748 COPS8Q99627 209 aa10.02□□□□□ -0.81
CAPN3-203ENST00000349748 UNKLQ9H9P5 680 aaKnown RBP10.02□□□□□ -0.81
CAPN3-203ENST00000349748 LRTM1Q9HBL6 345 aa10.02□□□□□ -0.81
CAPN3-203ENST00000349748 RASL12Q9NYN1 266 aa10.02□□□□□ -0.81
CAPN3-203ENST00000349748 METTL1Q9UBP6 276 aaKnown RBP10.02□□□□□ -0.81
CAPN3-203ENST00000349748 PCDHB10Q9UN67 800 aa10.02□□□□□ -0.81
CAPN3-203ENST00000349748 A0A1B0GW55 424 aa10.01□□□□□ -0.81
CAPN3-203ENST00000349748 ANHXE9PGG2 379 aa10.01□□□□□ -0.81
CAPN3-203ENST00000349748 H3BN98 237 aa10.01□□□□□ -0.81
CAPN3-203ENST00000349748 CACNB4O00305 520 aaPredicted RBP10.01□□□□□ -0.81
CAPN3-203ENST00000349748 STK25O00506 426 aa10.01□□□□□ -0.81
CAPN3-203ENST00000349748 GABRPO00591 440 aa10.01□□□□□ -0.81
CAPN3-203ENST00000349748 TLX2O43763 284 aaPredicted RBP10.01□□□□□ -0.81
CAPN3-203ENST00000349748 RAD1O60671 282 aa10.01□□□□□ -0.81
CAPN3-203ENST00000349748 CPSF4O95639 269 aaKnown RBP10.01□□□□□ -0.81
CAPN3-203ENST00000349748 UCHL1P09936 223 aa10.01□□□□□ -0.81
CAPN3-203ENST00000349748 DUX4L2P0CJ85 424 aa10.01□□□□□ -0.81
CAPN3-203ENST00000349748 DUX4L3P0CJ86 424 aa10.01□□□□□ -0.81
CAPN3-203ENST00000349748 DUX4L4P0CJ87 422 aa10.01□□□□□ -0.81
CAPN3-203ENST00000349748 DUX4L5P0CJ88 424 aa10.01□□□□□ -0.81
CAPN3-203ENST00000349748 DUX4L6P0CJ89 424 aa10.01□□□□□ -0.81
CAPN3-203ENST00000349748 DUX4L7P0CJ90 424 aa10.01□□□□□ -0.81
CAPN3-203ENST00000349748 FGF9P31371 208 aaPredicted RBP10.01□□□□□ -0.81
CAPN3-203ENST00000349748 IRS1P35568 1242 aa10.01□□□□□ -0.81
CAPN3-203ENST00000349748 HTR5AP47898 357 aa10.01□□□□□ -0.81
CAPN3-203ENST00000349748 SLC11A2P49281 568 aa10.01□□□□□ -0.81
CAPN3-203ENST00000349748 CCL23P55773 120 aa10.01□□□□□ -0.81
CAPN3-203ENST00000349748 MAT1AQ00266 395 aaKnown RBP10.01□□□□□ -0.81
CAPN3-203ENST00000349748 NOGQ13253 232 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms