RNA–Protein interactions for RNA: ENST00000348749.9

CHRNA1-202, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA1, Length 1,984 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-202ENST00000348749 HNRNPCL2B2RXH8 293 aa9.7□□□□□ -0.86
CHRNA1-202ENST00000348749 D6RAR5 112 aa9.7□□□□□ -0.86
CHRNA1-202ENST00000348749 FOXE1O00358 373 aaPredicted RBP9.7□□□□□ -0.86
CHRNA1-202ENST00000348749 PEX14O75381 377 aa9.7□□□□□ -0.86
CHRNA1-202ENST00000348749 RGS9O75916 674 aaPredicted RBP9.7□□□□□ -0.86
CHRNA1-202ENST00000348749 RGS11O94810 467 aa9.7□□□□□ -0.86
CHRNA1-202ENST00000348749 APOC1P02654 83 aa9.7□□□□□ -0.86
CHRNA1-202ENST00000348749 ALDOBP05062 364 aa9.7□□□□□ -0.86
CHRNA1-202ENST00000348749 RB1P06400 928 aa9.7□□□□□ -0.86
CHRNA1-202ENST00000348749 IRF1P10914 325 aa9.7□□□□□ -0.86
CHRNA1-202ENST00000348749 CD8BP10966 210 aa9.7□□□□□ -0.86
CHRNA1-202ENST00000348749 TYRP14679 529 aa9.7□□□□□ -0.86
CHRNA1-202ENST00000348749 CD22P20273 847 aa9.7□□□□□ -0.86
CHRNA1-202ENST00000348749 MMP15P51511 669 aa9.7□□□□□ -0.86
CHRNA1-202ENST00000348749 SMSP52788 366 aa9.7□□□□□ -0.86
CHRNA1-202ENST00000348749 ZNF763Q0D2J5 394 aa9.7□□□□□ -0.86
CHRNA1-202ENST00000348749 FOXD4Q12950 439 aaPredicted RBP9.7□□□□□ -0.86
CHRNA1-202ENST00000348749 DYRK1AQ13627 763 aa9.7□□□□□ -0.86
CHRNA1-202ENST00000348749 GRIN2CQ14957 1233 aa9.7□□□□□ -0.86
CHRNA1-202ENST00000348749 SF1Q15637 639 aaKnown RBP9.7□□□□□ -0.86
CHRNA1-202ENST00000348749 LTB4RQ15722 352 aa9.7□□□□□ -0.86
CHRNA1-202ENST00000348749 SLC22A10Q63ZE4 541 aa9.7□□□□□ -0.86
CHRNA1-202ENST00000348749 TPGS2Q68CL5 300 aa9.7□□□□□ -0.86
CHRNA1-202ENST00000348749 ACSM5Q6NUN0 579 aa9.7□□□□□ -0.86
CHRNA1-202ENST00000348749 TCTN3Q6NUS6 607 aa9.7□□□□□ -0.86
CHRNA1-202ENST00000348749 C17orf107Q6ZR85 190 aa9.7□□□□□ -0.86
CHRNA1-202ENST00000348749 HTR3DQ70Z44 454 aa9.7□□□□□ -0.86
CHRNA1-202ENST00000348749 MRGPREQ86SM8 312 aa9.7□□□□□ -0.86
CHRNA1-202ENST00000348749 SPICQ8N5J4 248 aa9.7□□□□□ -0.86
CHRNA1-202ENST00000348749 POGLUT1Q8NBL1 392 aa9.7□□□□□ -0.86
CHRNA1-202ENST00000348749 SLAIN1Q8ND83 568 aa9.7□□□□□ -0.86
CHRNA1-202ENST00000348749 FAM71CQ8NEG0 241 aa9.7□□□□□ -0.86
CHRNA1-202ENST00000348749 BEST4Q8NFU0 473 aa9.7□□□□□ -0.86
CHRNA1-202ENST00000348749 SKA2Q8WVK7 121 aaPredicted RBP9.7□□□□□ -0.86
CHRNA1-202ENST00000348749 MRPS24Q96EL2 167 aaKnown RBP9.7□□□□□ -0.86
CHRNA1-202ENST00000348749 ABCG4Q9H172 646 aa9.7□□□□□ -0.86
CHRNA1-202ENST00000348749 TTYH1Q9H313 450 aaPredicted RBP9.7□□□□□ -0.86
CHRNA1-202ENST00000348749 RPS6KB2Q9UBS0 482 aa9.7□□□□□ -0.86
CHRNA1-202ENST00000348749 NDRG3Q9UGV2 375 aa9.7□□□□□ -0.86
CHRNA1-202ENST00000348749 FBXW2Q9UKT8 454 aa9.7□□□□□ -0.86
CHRNA1-202ENST00000348749 MCRIP1C9JLW8 97 aa9.7□□□□□ -0.86
CHRNA1-202ENST00000348749 LINC01387J3KSC0 135 aa9.7□□□□□ -0.86
CHRNA1-202ENST00000348749 ZNF197O14709 1029 aa9.7□□□□□ -0.86
CHRNA1-202ENST00000348749 GPR37L1O60883 481 aa9.7□□□□□ -0.86
CHRNA1-202ENST00000348749 SEMA7AO75326 666 aa9.7□□□□□ -0.86
CHRNA1-202ENST00000348749 C6orf47O95873 294 aa9.7□□□□□ -0.86
CHRNA1-202ENST00000348749 PLATP00750 562 aa9.7□□□□□ -0.86
CHRNA1-202ENST00000348749 HPXP02790 462 aa9.7□□□□□ -0.86
CHRNA1-202ENST00000348749 GIPP09681 153 aaPredicted RBP9.7□□□□□ -0.86
CHRNA1-202ENST00000348749 CELP19835 753 aa9.7□□□□□ -0.86
CHRNA1-202ENST00000348749 NFYAP23511 347 aaPredicted RBP9.7□□□□□ -0.86
CHRNA1-202ENST00000348749 SMAD3P84022 425 aaKnown RBP9.7□□□□□ -0.86
CHRNA1-202ENST00000348749 BDH1Q02338 343 aa9.7□□□□□ -0.86
CHRNA1-202ENST00000348749 FGL1Q08830 312 aa9.7□□□□□ -0.86
CHRNA1-202ENST00000348749 IGSF11Q5DX21 431 aa9.7□□□□□ -0.86
CHRNA1-202ENST00000348749 PDSS1Q5T2R2 415 aa9.7□□□□□ -0.86
CHRNA1-202ENST00000348749 HIST2H2AA3Q6FI13 130 aa9.7□□□□□ -0.86
CHRNA1-202ENST00000348749 REEP3Q6NUK4 255 aa9.7□□□□□ -0.86
CHRNA1-202ENST00000348749 SHFQ7M4L6 423 aa9.7□□□□□ -0.86
CHRNA1-202ENST00000348749 OTOP2Q7RTS6 562 aa9.7□□□□□ -0.86
CHRNA1-202ENST00000348749 CPXM2Q8N436 756 aa9.7□□□□□ -0.86
CHRNA1-202ENST00000348749 KLHL36Q8N4N3 616 aa9.7□□□□□ -0.86
CHRNA1-202ENST00000348749 LINC00471Q8N535 108 aa9.7□□□□□ -0.86
CHRNA1-202ENST00000348749 SAMD12Q8N8I0 201 aa9.7□□□□□ -0.86
CHRNA1-202ENST00000348749 ZNF527Q8NB42 609 aa9.7□□□□□ -0.86
CHRNA1-202ENST00000348749 GPR32P1Q8NGA4 272 aa9.7□□□□□ -0.86
CHRNA1-202ENST00000348749 OR56A3Q8NH54 315 aa9.7□□□□□ -0.86
CHRNA1-202ENST00000348749 COQ8AQ8NI60 647 aa9.7□□□□□ -0.86
CHRNA1-202ENST00000348749 WDR34Q96EX3 536 aa9.7□□□□□ -0.86
CHRNA1-202ENST00000348749 PPP1R16AQ96I34 528 aa9.7□□□□□ -0.86
CHRNA1-202ENST00000348749 C12orf66Q96MD2 445 aa9.7□□□□□ -0.86
CHRNA1-202ENST00000348749 C20orf85Q9H1P6 137 aa9.7□□□□□ -0.86
CHRNA1-202ENST00000348749 SGK2Q9HBY8 427 aa9.7□□□□□ -0.86
CHRNA1-202ENST00000348749 HMX1Q9NP08 348 aaPredicted RBP9.7□□□□□ -0.86
CHRNA1-202ENST00000348749 POLMQ9NP87 494 aaPredicted RBP9.7□□□□□ -0.86
CHRNA1-202ENST00000348749 SLC35C2Q9NQQ7 365 aa9.7□□□□□ -0.86
CHRNA1-202ENST00000348749 NFKBIL1Q9UBC1 381 aaPredicted RBP9.7□□□□□ -0.86
CHRNA1-202ENST00000348749 FBXL2Q9UKC9 423 aa9.7□□□□□ -0.86
CHRNA1-202ENST00000348749 ZFR2Q9UPR6 939 aaKnown RBP9.7□□□□□ -0.86
CHRNA1-202ENST00000348749 TCRBV16S1A1N1A0A5B0 115 aa9.69□□□□□ -0.86
CHRNA1-202ENST00000348749 K7ERQ8 282 aa9.69□□□□□ -0.86
CHRNA1-202ENST00000348749 SGTAO43765 313 aa9.69□□□□□ -0.86
CHRNA1-202ENST00000348749 NME6O75414 186 aaPredicted RBP9.69□□□□□ -0.86
CHRNA1-202ENST00000348749 ITGA10O75578 1167 aa9.69□□□□□ -0.86
CHRNA1-202ENST00000348749 TFP02787 698 aa9.69□□□□□ -0.86
CHRNA1-202ENST00000348749 CATP04040 527 aaKnown RBP9.69□□□□□ -0.86
CHRNA1-202ENST00000348749 GALTP07902 379 aa9.69□□□□□ -0.86
CHRNA1-202ENST00000348749 RPL17P18621 184 aaKnown RBP9.69□□□□□ -0.86
CHRNA1-202ENST00000348749 POU3F2P20265 443 aaPredicted RBP9.69□□□□□ -0.86
CHRNA1-202ENST00000348749 CD96P40200 585 aa9.69□□□□□ -0.86
CHRNA1-202ENST00000348749 RPL35P42766 123 aaKnown RBP9.69□□□□□ -0.86
CHRNA1-202ENST00000348749 SPINT3P49223 89 aa9.69□□□□□ -0.86
CHRNA1-202ENST00000348749 CCR6P51684 374 aa9.69□□□□□ -0.86
CHRNA1-202ENST00000348749 KIAA1024LP59773 190 aa9.69□□□□□ -0.86
CHRNA1-202ENST00000348749 RAB8AP61006 207 aa9.69□□□□□ -0.86
CHRNA1-202ENST00000348749 RAP2BP61225 183 aa9.69□□□□□ -0.86
CHRNA1-202ENST00000348749 PITPNAQ00169 270 aa9.69□□□□□ -0.86
CHRNA1-202ENST00000348749 PTSQ03393 145 aa9.69□□□□□ -0.86
CHRNA1-202ENST00000348749 INSL4Q14641 139 aa9.69□□□□□ -0.86
CHRNA1-202ENST00000348749 HLXQ14774 488 aaPredicted RBP9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms