RNA–Protein interactions for RNA: ENST00000344722.5

SMC4-201, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-201ENST00000344722 PBX2P40425 430 aa17.12■□□□□ 0.33
SMC4-201ENST00000344722 ASAH1Q13510 395 aa17.12■□□□□ 0.33
SMC4-201ENST00000344722 SYNPRQ8TBG9 265 aa17.12■□□□□ 0.33
SMC4-201ENST00000344722 GLYATL1Q969I3 302 aa17.12■□□□□ 0.33
SMC4-201ENST00000344722 SULT4A1Q9BR01 284 aa17.12■□□□□ 0.33
SMC4-201ENST00000344722 BOCQ9BWV1 1114 aa17.12■□□□□ 0.33
SMC4-201ENST00000344722 PINK1Q9BXM7 581 aa17.12■□□□□ 0.33
SMC4-201ENST00000344722 ZDHHC4Q9NPG8 344 aa17.12■□□□□ 0.33
SMC4-201ENST00000344722 SERINC1Q9NRX5 453 aa17.12■□□□□ 0.33
SMC4-201ENST00000344722 ZFP57Q9NU63 452 aa17.12■□□□□ 0.33
SMC4-201ENST00000344722 BABAM2Q9NXR7 383 aa17.12■□□□□ 0.33
SMC4-201ENST00000344722 NOX1Q9Y5S8 564 aa17.12■□□□□ 0.33
SMC4-201ENST00000344722 IFNA5P01569 189 aa17.11■□□□□ 0.33
SMC4-201ENST00000344722 CDKN1CP49918 316 aaPredicted RBP17.11■□□□□ 0.33
SMC4-201ENST00000344722 BTG1P62324 171 aa17.11■□□□□ 0.33
SMC4-201ENST00000344722 TCTE1Q5JU00 501 aa17.11■□□□□ 0.33
SMC4-201ENST00000344722 PXDC1Q5TGL8 231 aa17.11■□□□□ 0.33
SMC4-201ENST00000344722 SLC35F2Q8IXU6 374 aa17.11■□□□□ 0.33
SMC4-201ENST00000344722 PNPLA1Q8N8W4 532 aa17.11■□□□□ 0.33
SMC4-201ENST00000344722 ZNF689Q96CS4 500 aaPredicted RBP17.11■□□□□ 0.33
SMC4-201ENST00000344722 CORINQ9Y5Q5 1042 aa17.11■□□□□ 0.33
SMC4-201ENST00000344722 ZNF8P17098 575 aaPredicted RBP17.11■□□□□ 0.33
SMC4-201ENST00000344722 CDK2P24941 298 aa17.11■□□□□ 0.33
SMC4-201ENST00000344722 WASP42768 502 aa17.11■□□□□ 0.33
SMC4-201ENST00000344722 DEFA6Q01524 100 aa17.11■□□□□ 0.33
SMC4-201ENST00000344722 CRYZQ08257 329 aaKnown RBP17.11■□□□□ 0.33
SMC4-201ENST00000344722 SLAMF1Q13291 335 aa17.11■□□□□ 0.33
SMC4-201ENST00000344722 C3orf38Q5JPI3 329 aa17.11■□□□□ 0.33
SMC4-201ENST00000344722 SMPDL3BQ92485 455 aa17.11■□□□□ 0.33
SMC4-201ENST00000344722 PRRC1Q96M27 445 aa17.11■□□□□ 0.33
SMC4-201ENST00000344722 NEURL2Q9BR09 285 aa17.11■□□□□ 0.33
SMC4-201ENST00000344722 SLC38A1Q9H2H9 487 aa17.11■□□□□ 0.33
SMC4-201ENST00000344722 CNIH4Q9P003 139 aa17.11■□□□□ 0.33
SMC4-201ENST00000344722 SLC6A5Q9Y345 797 aa17.11■□□□□ 0.33
SMC4-201ENST00000344722 ADAM23O75077 832 aa17.11■□□□□ 0.33
SMC4-201ENST00000344722 AHSA1O95433 338 aa17.11■□□□□ 0.33
SMC4-201ENST00000344722 THEGLP0DJG4 465 aa17.11■□□□□ 0.33
SMC4-201ENST00000344722 GP1BBP13224 206 aa17.11■□□□□ 0.33
SMC4-201ENST00000344722 ARSAP15289 507 aa17.11■□□□□ 0.33
SMC4-201ENST00000344722 KCTD11Q693B1 232 aa17.11■□□□□ 0.33
SMC4-201ENST00000344722 DHRS9Q9BPW9 319 aa17.11■□□□□ 0.33
SMC4-201ENST00000344722 RNF13O43567 381 aa17.11■□□□□ 0.33
SMC4-201ENST00000344722 APEX1P27695 318 aaKnown RBP17.11■□□□□ 0.33
SMC4-201ENST00000344722 FKBP1BP68106 108 aa17.11■□□□□ 0.33
SMC4-201ENST00000344722 AMZ1Q400G9 498 aa17.11■□□□□ 0.33
SMC4-201ENST00000344722 HBMQ6B0K9 141 aa17.11■□□□□ 0.33
SMC4-201ENST00000344722 SEC61A2Q9H9S3 476 aa17.11■□□□□ 0.33
SMC4-201ENST00000344722 TCRBV5S1A1TA0A578 114 aa17.11■□□□□ 0.33
SMC4-201ENST00000344722 MUSKO15146 869 aa17.11■□□□□ 0.33
SMC4-201ENST00000344722 DCNP07585 359 aaKnown RBP17.11■□□□□ 0.33
SMC4-201ENST00000344722 BPIP17213 487 aa17.11■□□□□ 0.33
SMC4-201ENST00000344722 PRKCAP17252 672 aa17.11■□□□□ 0.33
SMC4-201ENST00000344722 TMEM35AQ53FP2 167 aa17.11■□□□□ 0.33
SMC4-201ENST00000344722 OR4C11Q6IEV9 310 aa17.11■□□□□ 0.33
SMC4-201ENST00000344722 SLC16A9Q7RTY1 509 aa17.11■□□□□ 0.33
SMC4-201ENST00000344722 DYNC2LI1Q8TCX1 351 aa17.11■□□□□ 0.33
SMC4-201ENST00000344722 PAQR8Q8TEZ7 354 aa17.11■□□□□ 0.33
SMC4-201ENST00000344722 SLCO4A1Q96BD0 722 aa17.11■□□□□ 0.33
SMC4-201ENST00000344722 HOXD1Q9GZZ0 328 aa17.11■□□□□ 0.33
SMC4-201ENST00000344722 A0A1B0GTW7 788 aa17.1■□□□□ 0.33
SMC4-201ENST00000344722 HMX2A2RU54 273 aa17.1■□□□□ 0.33
SMC4-201ENST00000344722 FZD7O75084 574 aa17.1■□□□□ 0.33
SMC4-201ENST00000344722 ZNF780AO75290 641 aaPredicted RBP17.1■□□□□ 0.33
SMC4-201ENST00000344722 GSRP00390 522 aa17.1■□□□□ 0.33
SMC4-201ENST00000344722 UBE2NLQ5JXB2 153 aa17.1■□□□□ 0.33
SMC4-201ENST00000344722 TIGD3Q6B0B8 471 aa17.1■□□□□ 0.33
SMC4-201ENST00000344722 KDM4DQ6B0I6 523 aa17.1■□□□□ 0.33
SMC4-201ENST00000344722 ENPP7Q6UWV6 458 aa17.1■□□□□ 0.33
SMC4-201ENST00000344722 ZNF551Q7Z340 670 aaPredicted RBP17.1■□□□□ 0.33
SMC4-201ENST00000344722 TMEM175Q9BSA9 504 aa17.1■□□□□ 0.33
SMC4-201ENST00000344722 G6PC3Q9BUM1 346 aa17.1■□□□□ 0.33
SMC4-201ENST00000344722 DDX31Q9H8H2 851 aaKnown RBP17.1■□□□□ 0.33
SMC4-201ENST00000344722 ADRA1AP35348 466 aa17.1■□□□□ 0.33
SMC4-201ENST00000344722 SLC35A2P78381 396 aa17.1■□□□□ 0.33
SMC4-201ENST00000344722 CD276Q5ZPR3 534 aa17.1■□□□□ 0.33
SMC4-201ENST00000344722 ZNF546Q86UE3 836 aa17.1■□□□□ 0.33
SMC4-201ENST00000344722 CMKLR1Q99788 373 aa17.1■□□□□ 0.33
SMC4-201ENST00000344722 MTHFD2LQ9H903 347 aaPredicted RBP17.1■□□□□ 0.33
SMC4-201ENST00000344722 CSNK1G3Q9Y6M4 447 aa17.1■□□□□ 0.33
SMC4-201ENST00000344722 OR8U9P0C7N5 309 aa17.1■□□□□ 0.33
SMC4-201ENST00000344722 GRPRP30550 384 aa17.1■□□□□ 0.33
SMC4-201ENST00000344722 NRG3P56975 720 aa17.1■□□□□ 0.33
SMC4-201ENST00000344722 LRRC25Q8N386 305 aaPredicted RBP17.1■□□□□ 0.33
SMC4-201ENST00000344722 BOLLQ8N9W6 283 aaKnown RBP17.1■□□□□ 0.33
SMC4-201ENST00000344722 OR13C3Q8NGS6 347 aa17.1■□□□□ 0.33
SMC4-201ENST00000344722 C3orf49Q96BT1 292 aa17.1■□□□□ 0.33
SMC4-201ENST00000344722 WASH4PA8MWX3 477 aa17.1■□□□□ 0.33
SMC4-201ENST00000344722 SMLR1H3BR10 107 aa17.1■□□□□ 0.33
SMC4-201ENST00000344722 CLUP10909 449 aa17.1■□□□□ 0.33
SMC4-201ENST00000344722 JUNDP17535 347 aa17.1■□□□□ 0.33
SMC4-201ENST00000344722 ZNF140P52738 457 aaPredicted RBP17.1■□□□□ 0.33
SMC4-201ENST00000344722 RPS25P62851 125 aaKnown RBP17.1■□□□□ 0.33
SMC4-201ENST00000344722 PSPHP78330 225 aa17.1■□□□□ 0.33
SMC4-201ENST00000344722 TP53I3Q53FA7 332 aa17.1■□□□□ 0.33
SMC4-201ENST00000344722 LRRC56Q8IYG6 542 aaPredicted RBP17.1■□□□□ 0.33
SMC4-201ENST00000344722 APMAPQ9HDC9 416 aa17.1■□□□□ 0.33
SMC4-201ENST00000344722 GABRR3A8MPY1 467 aa17.09■□□□□ 0.33
SMC4-201ENST00000344722 RAB3AP20336 220 aa17.09■□□□□ 0.33
SMC4-201ENST00000344722 CAV3P56539 151 aa17.09■□□□□ 0.33
SMC4-201ENST00000344722 PTPRRQ15256 657 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms