RNA–Protein interactions for RNA: ENST00000341753.10

TRIM28-202, Transcript of tripartite motif containing 28, humanhuman

TSL 1 (best) BASIC

Gene TRIM28, Length 2,709 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-202ENST00000341753 BSGP35613 385 aa20.99■□□□□ 0.95
TRIM28-202ENST00000341753 PCBP4P57723 403 aaKnown RBP20.99■□□□□ 0.95
TRIM28-202ENST00000341753 OR10A3P58181 314 aa20.99■□□□□ 0.95
TRIM28-202ENST00000341753 TAS2R41P59536 307 aa20.99■□□□□ 0.95
TRIM28-202ENST00000341753 PLA1AQ53H76 456 aa20.99■□□□□ 0.95
TRIM28-202ENST00000341753 PXDC1Q5TGL8 231 aa20.99■□□□□ 0.95
TRIM28-202ENST00000341753 KHDRBS2Q5VWX1 349 aaKnown RBP20.99■□□□□ 0.95
TRIM28-202ENST00000341753 SAMD12Q8N8I0 201 aa20.99■□□□□ 0.95
TRIM28-202ENST00000341753 RFT1Q96AA3 541 aa20.99■□□□□ 0.95
TRIM28-202ENST00000341753 DDX31Q9H8H2 851 aaKnown RBP20.99■□□□□ 0.95
TRIM28-202ENST00000341753 TAC3Q9UHF0 121 aa20.99■□□□□ 0.95
TRIM28-202ENST00000341753 ELF5Q9UKW6 265 aaPredicted RBP20.99■□□□□ 0.95
TRIM28-202ENST00000341753 SIRT4Q9Y6E7 314 aaPredicted RBP20.99■□□□□ 0.95
TRIM28-202ENST00000341753 SOCS6O14544 535 aa20.98■□□□□ 0.95
TRIM28-202ENST00000341753 SERPIND1P05546 499 aa20.98■□□□□ 0.95
TRIM28-202ENST00000341753 RB1P06400 928 aa20.98■□□□□ 0.95
TRIM28-202ENST00000341753 PSMB5P28074 263 aa20.98■□□□□ 0.95
TRIM28-202ENST00000341753 POU6F2P78424 691 aaPredicted RBP20.98■□□□□ 0.95
TRIM28-202ENST00000341753 IDO2Q6ZQW0 420 aa20.98■□□□□ 0.95
TRIM28-202ENST00000341753 KLHL36Q8N4N3 616 aa20.98■□□□□ 0.95
TRIM28-202ENST00000341753 OR5AR1Q8NGP9 310 aa20.98■□□□□ 0.95
TRIM28-202ENST00000341753 MS4A3Q96HJ5 214 aa20.98■□□□□ 0.95
TRIM28-202ENST00000341753 PAWRQ96IZ0 340 aaKnown RBP20.98■□□□□ 0.95
TRIM28-202ENST00000341753 PRRC1Q96M27 445 aa20.98■□□□□ 0.95
TRIM28-202ENST00000341753 GPR137Q96N19 417 aa20.98■□□□□ 0.95
TRIM28-202ENST00000341753 FCRL4Q96PJ5 515 aa20.98■□□□□ 0.95
TRIM28-202ENST00000341753 DPCDQ9BVM2 203 aaPredicted RBP20.98■□□□□ 0.95
TRIM28-202ENST00000341753 DIABLOQ9NR28 239 aa20.98■□□□□ 0.95
TRIM28-202ENST00000341753 EIF3KQ9UBQ5 218 aaKnown RBP20.98■□□□□ 0.95
TRIM28-202ENST00000341753 ADAM30Q9UKF2 790 aa20.98■□□□□ 0.95
TRIM28-202ENST00000341753 GPR55Q9Y2T6 319 aaPredicted RBP20.98■□□□□ 0.95
TRIM28-202ENST00000341753 KDM4EB2RXH2 506 aaPredicted RBP20.98■□□□□ 0.95
TRIM28-202ENST00000341753 ADH1AP07327 375 aa20.98■□□□□ 0.95
TRIM28-202ENST00000341753 BTCP35070 178 aa20.98■□□□□ 0.95
TRIM28-202ENST00000341753 GPR4P46093 362 aa20.98■□□□□ 0.95
TRIM28-202ENST00000341753 MESP2Q0VG99 397 aa20.98■□□□□ 0.95
TRIM28-202ENST00000341753 FGFBP1Q14512 234 aa20.98■□□□□ 0.95
TRIM28-202ENST00000341753 ZNF750Q32MQ0 723 aa20.98■□□□□ 0.95
TRIM28-202ENST00000341753 PIP5KL1Q5T9C9 394 aa20.98■□□□□ 0.95
TRIM28-202ENST00000341753 KIAA1211LQ6NV74 962 aa20.98■□□□□ 0.95
TRIM28-202ENST00000341753 BEST4Q8NFU0 473 aa20.98■□□□□ 0.95
TRIM28-202ENST00000341753 HSD17B8Q92506 261 aa20.98■□□□□ 0.95
TRIM28-202ENST00000341753 DACT3Q96B18 629 aaPredicted RBP20.98■□□□□ 0.95
TRIM28-202ENST00000341753 NACC2Q96BF6 587 aa20.98■□□□□ 0.95
TRIM28-202ENST00000341753 PIGUQ9H490 435 aa20.98■□□□□ 0.95
TRIM28-202ENST00000341753 FOLH1BQ9HBA9 442 aa20.98■□□□□ 0.95
TRIM28-202ENST00000341753 SLCO1C1Q9NYB5 712 aa20.98■□□□□ 0.95
TRIM28-202ENST00000341753 KCNE3Q9Y6H6 103 aa20.98■□□□□ 0.95
TRIM28-202ENST00000341753 NOTCH4Q99466 2003 aa20.98■□□□□ 0.95
TRIM28-202ENST00000341753 REV3LO60673 3130 aa20.98■□□□□ 0.95
TRIM28-202ENST00000341753 SRP54P61011 504 aaKnown RBP20.98■□□□□ 0.95
TRIM28-202ENST00000341753 NTRK2Q16620 822 aa20.98■□□□□ 0.95
TRIM28-202ENST00000341753 VN1R2Q8NFZ6 395 aa20.98■□□□□ 0.95
TRIM28-202ENST00000341753 ZG16BQ96DA0 208 aa20.98■□□□□ 0.95
TRIM28-202ENST00000341753 BEX1Q9HBH7 125 aa20.98■□□□□ 0.95
TRIM28-202ENST00000341753 ASF1AQ9Y294 204 aa20.98■□□□□ 0.95
TRIM28-202ENST00000341753 SLC19A2O60779 497 aa20.97■□□□□ 0.95
TRIM28-202ENST00000341753 SHC1P29353 583 aa20.97■□□□□ 0.95
TRIM28-202ENST00000341753 PPP2R1BP30154 601 aa20.97■□□□□ 0.95
TRIM28-202ENST00000341753 PPM1AP35813 382 aa20.97■□□□□ 0.95
TRIM28-202ENST00000341753 RIN1Q13671 783 aa20.97■□□□□ 0.95
TRIM28-202ENST00000341753 LASP1Q14847 261 aaKnown RBP20.97■□□□□ 0.95
TRIM28-202ENST00000341753 BICRALQ6AI39 1079 aa20.97■□□□□ 0.95
TRIM28-202ENST00000341753 OR51G2Q8NGK0 314 aa20.97■□□□□ 0.95
TRIM28-202ENST00000341753 FAM83CQ9BQN1 747 aa20.97■□□□□ 0.95
TRIM28-202ENST00000341753 ZNF649Q9BS31 505 aa20.97■□□□□ 0.95
TRIM28-202ENST00000341753 LHX9Q9NQ69 397 aa20.97■□□□□ 0.95
TRIM28-202ENST00000341753 SPHK2Q9NRA0 654 aa20.97■□□□□ 0.95
TRIM28-202ENST00000341753 AHSPQ9NZD4 102 aa20.97■□□□□ 0.95
TRIM28-202ENST00000341753 IRGMA1A4Y4 181 aa20.97■□□□□ 0.95
TRIM28-202ENST00000341753 FUT5Q11128 374 aa20.97■□□□□ 0.95
TRIM28-202ENST00000341753 RPA4Q13156 261 aa20.97■□□□□ 0.95
TRIM28-202ENST00000341753 TMEM107Q6UX40 140 aa20.97■□□□□ 0.95
TRIM28-202ENST00000341753 SIRT6Q8N6T7 355 aa20.97■□□□□ 0.95
TRIM28-202ENST00000341753 POGLUT1Q8NBL1 392 aa20.97■□□□□ 0.95
TRIM28-202ENST00000341753 MSANTD3Q96H12 275 aa20.97■□□□□ 0.95
TRIM28-202ENST00000341753 GLIPR2Q9H4G4 154 aa20.97■□□□□ 0.95
TRIM28-202ENST00000341753 SEMA4GQ9NTN9 838 aa20.97■□□□□ 0.95
TRIM28-202ENST00000341753 DNAH14Q0VDD8 3507 aa20.96■□□□□ 0.95
TRIM28-202ENST00000341753 A8MUA0 341 aa20.96■□□□□ 0.95
TRIM28-202ENST00000341753 RHOP08100 348 aa20.96■□□□□ 0.95
TRIM28-202ENST00000341753 HK1P19367 917 aa20.96■□□□□ 0.95
TRIM28-202ENST00000341753 GSTM3P21266 225 aa20.96■□□□□ 0.95
TRIM28-202ENST00000341753 STOMP27105 288 aa20.96■□□□□ 0.95
TRIM28-202ENST00000341753 DSG2Q14126 1118 aa20.96■□□□□ 0.95
TRIM28-202ENST00000341753 ZNF267Q14586 743 aaPredicted RBP20.96■□□□□ 0.95
TRIM28-202ENST00000341753 LIPIQ6XZB0 460 aa20.96■□□□□ 0.95
TRIM28-202ENST00000341753 FAM129CQ86XR2 697 aa20.96■□□□□ 0.95
TRIM28-202ENST00000341753 FBXL6Q8N531 539 aa20.96■□□□□ 0.95
TRIM28-202ENST00000341753 ABHD1Q96SE0 405 aa20.96■□□□□ 0.95
TRIM28-202ENST00000341753 CXXC1Q9P0U4 656 aaPredicted RBP20.96■□□□□ 0.95
TRIM28-202ENST00000341753 CACNG2Q9Y698 323 aa20.96■□□□□ 0.95
TRIM28-202ENST00000341753 M6PRP20645 277 aa20.96■□□□□ 0.95
TRIM28-202ENST00000341753 RGS1Q08116 209 aa20.96■□□□□ 0.95
TRIM28-202ENST00000341753 FZD5Q13467 585 aa20.96■□□□□ 0.95
TRIM28-202ENST00000341753 MTFR2Q6P444 385 aa20.96■□□□□ 0.95
TRIM28-202ENST00000341753 KRT78Q8N1N4 520 aa20.96■□□□□ 0.95
TRIM28-202ENST00000341753 FBXO15Q8NCQ5 510 aaPredicted RBP20.96■□□□□ 0.95
TRIM28-202ENST00000341753 TRAF4Q9BUZ4 470 aaPredicted RBP20.96■□□□□ 0.95
TRIM28-202ENST00000341753 LIPT1Q9Y234 373 aa20.96■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms