RNA–Protein interactions for RNA: ENST00000340437.8

CPSF7-201, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 1 (best) BASIC

Gene CPSF7, Length 3,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-201ENST00000340437 EEF1E1O43324 174 aaKnown RBP13.5□□□□□ -0.25
CPSF7-201ENST00000340437 SERPINI2O75830 405 aa13.5□□□□□ -0.25
CPSF7-201ENST00000340437 CHRNB1P11230 501 aa13.5□□□□□ -0.25
CPSF7-201ENST00000340437 ITGB8P26012 769 aa13.5□□□□□ -0.25
CPSF7-201ENST00000340437 EVI2BP34910 448 aa13.5□□□□□ -0.25
CPSF7-201ENST00000340437 FAPQ12884 760 aa13.5□□□□□ -0.25
CPSF7-201ENST00000340437 COX10Q12887 443 aa13.5□□□□□ -0.25
CPSF7-201ENST00000340437 BCL2L15Q5TBC7 163 aa13.5□□□□□ -0.25
CPSF7-201ENST00000340437 CYB561A3Q8NBI2 242 aa13.5□□□□□ -0.25
CPSF7-201ENST00000340437 NUP43Q8NFH3 380 aa13.5□□□□□ -0.25
CPSF7-201ENST00000340437 WDR34Q96EX3 536 aa13.5□□□□□ -0.25
CPSF7-201ENST00000340437 CNRIP1Q96F85 164 aaPredicted RBP13.5□□□□□ -0.25
CPSF7-201ENST00000340437 TESQ9UGI8 421 aaKnown RBP13.5□□□□□ -0.25
CPSF7-201ENST00000340437 HEATR5BQ9P2D3 2071 aa13.5□□□□□ -0.25
CPSF7-201ENST00000340437 TRPM6Q9BX84 2022 aa13.5□□□□□ -0.25
CPSF7-201ENST00000340437 CABIN1Q9Y6J0 2220 aa13.5□□□□□ -0.25
CPSF7-201ENST00000340437 A0A1W2PR48 441 aa13.5□□□□□ -0.25
CPSF7-201ENST00000340437 NARSO43776 548 aaKnown RBP13.5□□□□□ -0.25
CPSF7-201ENST00000340437 MOSPD3O75425 235 aa13.5□□□□□ -0.25
CPSF7-201ENST00000340437 GYPBP06028 91 aa13.5□□□□□ -0.25
CPSF7-201ENST00000340437 ACADMP11310 421 aa13.5□□□□□ -0.25
CPSF7-201ENST00000340437 CCL5P13501 91 aa13.5□□□□□ -0.25
CPSF7-201ENST00000340437 SHC1P29353 583 aa13.5□□□□□ -0.25
CPSF7-201ENST00000340437 PPP3R1P63098 170 aa13.5□□□□□ -0.25
CPSF7-201ENST00000340437 RAB40BQ12829 278 aa13.5□□□□□ -0.25
CPSF7-201ENST00000340437 SLC39A5Q6ZMH5 540 aa13.5□□□□□ -0.25
CPSF7-201ENST00000340437 TMEFF1Q8IYR6 380 aa13.5□□□□□ -0.25
CPSF7-201ENST00000340437 KLHL36Q8N4N3 616 aa13.5□□□□□ -0.25
CPSF7-201ENST00000340437 OR4Q3Q8NH05 313 aa13.5□□□□□ -0.25
CPSF7-201ENST00000340437 SUSD6Q92537 303 aa13.5□□□□□ -0.25
CPSF7-201ENST00000340437 SENP5Q96HI0 755 aaPredicted RBP13.5□□□□□ -0.25
CPSF7-201ENST00000340437 DPH1Q9BZG8 443 aa13.5□□□□□ -0.25
CPSF7-201ENST00000340437 ARRDC5A6NEK1 342 aa13.5□□□□□ -0.25
CPSF7-201ENST00000340437 OTOL1A6NHN0 477 aaPredicted RBP13.5□□□□□ -0.25
CPSF7-201ENST00000340437 PAPLNO95428 1278 aa13.5□□□□□ -0.25
CPSF7-201ENST00000340437 LGI1O95970 557 aa13.5□□□□□ -0.25
CPSF7-201ENST00000340437 ELK1P19419 428 aa13.5□□□□□ -0.25
CPSF7-201ENST00000340437 GNG2P59768 71 aa13.5□□□□□ -0.25
CPSF7-201ENST00000340437 CSNK1G2P78368 415 aa13.5□□□□□ -0.25
CPSF7-201ENST00000340437 BTN3A2P78410 334 aa13.5□□□□□ -0.25
CPSF7-201ENST00000340437 ENTPD8Q5MY95 495 aa13.5□□□□□ -0.25
CPSF7-201ENST00000340437 QSOX2Q6ZRP7 698 aa13.5□□□□□ -0.25
CPSF7-201ENST00000340437 RDH10Q8IZV5 341 aa13.5□□□□□ -0.25
CPSF7-201ENST00000340437 MORN4Q8NDC4 146 aa13.5□□□□□ -0.25
CPSF7-201ENST00000340437 BEST4Q8NFU0 473 aa13.5□□□□□ -0.25
CPSF7-201ENST00000340437 OR6C4Q8NGE1 309 aa13.5□□□□□ -0.25
CPSF7-201ENST00000340437 TMEM106CQ9BVX2 250 aa13.5□□□□□ -0.25
CPSF7-201ENST00000340437 TEX12Q9BXU0 123 aa13.5□□□□□ -0.25
CPSF7-201ENST00000340437 KLHL28Q9NXS3 571 aa13.5□□□□□ -0.25
CPSF7-201ENST00000340437 DEC1Q9P2X7 70 aa13.5□□□□□ -0.25
CPSF7-201ENST00000340437 ALPK3Q96L96 1907 aa13.5□□□□□ -0.25
CPSF7-201ENST00000340437 ZNF860A6NHJ4 632 aa13.49□□□□□ -0.25
CPSF7-201ENST00000340437 HLA-DPB1P04440 258 aa13.49□□□□□ -0.25
CPSF7-201ENST00000340437 RPS5P46782 204 aaKnown RBP13.49□□□□□ -0.25
CPSF7-201ENST00000340437 GCGRP47871 477 aa13.49□□□□□ -0.25
CPSF7-201ENST00000340437 OR10A3P58181 314 aa13.49□□□□□ -0.25
CPSF7-201ENST00000340437 CDK5Q00535 292 aa13.49□□□□□ -0.25
CPSF7-201ENST00000340437 C3orf38Q5JPI3 329 aa13.49□□□□□ -0.25
CPSF7-201ENST00000340437 FAM205BPQ63HN1 556 aa13.49□□□□□ -0.25
CPSF7-201ENST00000340437 C1orf94Q6P1W5 598 aa13.49□□□□□ -0.25
CPSF7-201ENST00000340437 LILRA6Q6PI73 481 aa13.49□□□□□ -0.25
CPSF7-201ENST00000340437 RPTNQ6XPR3 784 aa13.49□□□□□ -0.25
CPSF7-201ENST00000340437 NRSN1Q8IZ57 195 aa13.49□□□□□ -0.25
CPSF7-201ENST00000340437 ACOT4Q8N9L9 421 aa13.49□□□□□ -0.25
CPSF7-201ENST00000340437 SLAIN1Q8ND83 568 aa13.49□□□□□ -0.25
CPSF7-201ENST00000340437 GNPDA2Q8TDQ7 276 aa13.49□□□□□ -0.25
CPSF7-201ENST00000340437 MSLNLQ96KJ4 702 aa13.49□□□□□ -0.25
CPSF7-201ENST00000340437 WDFY2Q96P53 400 aa13.49□□□□□ -0.25
CPSF7-201ENST00000340437 OR7D2Q96RA2 312 aa13.49□□□□□ -0.25
CPSF7-201ENST00000340437 DPEP2Q9H4A9 486 aa13.49□□□□□ -0.25
CPSF7-201ENST00000340437 MRPL15Q9P015 296 aaKnown RBP13.49□□□□□ -0.25
CPSF7-201ENST00000340437 ERVH48-1M5A8F1 160 aa13.49□□□□□ -0.25
CPSF7-201ENST00000340437 LANCL1O43813 399 aa13.49□□□□□ -0.25
CPSF7-201ENST00000340437 ALAS2P22557 587 aa13.49□□□□□ -0.25
CPSF7-201ENST00000340437 IFNGR2P38484 337 aa13.49□□□□□ -0.25
CPSF7-201ENST00000340437 FUT5Q11128 374 aa13.49□□□□□ -0.25
CPSF7-201ENST00000340437 TRAM2Q15035 370 aa13.49□□□□□ -0.25
CPSF7-201ENST00000340437 ZSWIM7Q19AV6 140 aa13.49□□□□□ -0.25
CPSF7-201ENST00000340437 AMIGO1Q86WK6 493 aa13.49□□□□□ -0.25
CPSF7-201ENST00000340437 OR51L1Q8NGJ5 315 aa13.49□□□□□ -0.25
CPSF7-201ENST00000340437 ZNF514Q96K75 400 aaPredicted RBP13.49□□□□□ -0.25
CPSF7-201ENST00000340437 INSM2Q96T92 566 aaPredicted RBP13.49□□□□□ -0.25
CPSF7-201ENST00000340437 ATF6BQ99941 703 aa13.49□□□□□ -0.25
CPSF7-201ENST00000340437 CACYBPQ9HB71 228 aaKnown RBP13.49□□□□□ -0.25
CPSF7-201ENST00000340437 MRPS30Q9NP92 439 aaKnown RBP13.49□□□□□ -0.25
CPSF7-201ENST00000340437 MBNL1Q9NR56 388 aaKnown RBP13.49□□□□□ -0.25
CPSF7-201ENST00000340437 SLC7A7Q9UM01 511 aa13.49□□□□□ -0.25
CPSF7-201ENST00000340437 A0A0B4J203 849 aa13.49□□□□□ -0.25
CPSF7-201ENST00000340437 A0A1W2PQ72 361 aa13.49□□□□□ -0.25
CPSF7-201ENST00000340437 CENPBD1B2RD01 187 aa13.49□□□□□ -0.25
CPSF7-201ENST00000340437 C4orf51C9J302 202 aa13.49□□□□□ -0.25
CPSF7-201ENST00000340437 J3QLW9 94 aa13.49□□□□□ -0.25
CPSF7-201ENST00000340437 ZNF19P17023 458 aa13.49□□□□□ -0.25
CPSF7-201ENST00000340437 GABRA5P31644 462 aa13.49□□□□□ -0.25
CPSF7-201ENST00000340437 PPM1AP35813 382 aa13.49□□□□□ -0.25
CPSF7-201ENST00000340437 TALDO1P37837 337 aa13.49□□□□□ -0.25
CPSF7-201ENST00000340437 BCL6P41182 706 aa13.49□□□□□ -0.25
CPSF7-201ENST00000340437 VEGFBP49765 207 aa13.49□□□□□ -0.25
CPSF7-201ENST00000340437 MZT2AQ6P582 158 aa13.49□□□□□ -0.25
CPSF7-201ENST00000340437 OR51A7Q8NH64 312 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms