RNA–Protein interactions for RNA: ENST00000339997.8

RTN3-202, Transcript of reticulon 3, humanhuman

TSL 1 (best) BASIC

Gene RTN3, Length 4,886 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-202ENST00000339997 BDH1Q02338 343 aa8.24□□□□□ -1.09
RTN3-202ENST00000339997 MICAQ29983 383 aa8.24□□□□□ -1.09
RTN3-202ENST00000339997 PRRT3Q5FWE3 981 aa8.24□□□□□ -1.09
RTN3-202ENST00000339997 ZNF565Q8N9K5 539 aa8.24□□□□□ -1.09
RTN3-202ENST00000339997 ZSCAN4Q8NAM6 433 aaPredicted RBP8.24□□□□□ -1.09
RTN3-202ENST00000339997 MTMR14Q8NCE2 650 aa8.24□□□□□ -1.09
RTN3-202ENST00000339997 SDR9C7Q8NEX9 313 aa8.24□□□□□ -1.09
RTN3-202ENST00000339997 OR52N2Q8NGI0 321 aa8.24□□□□□ -1.09
RTN3-202ENST00000339997 ECHDC3Q96DC8 303 aa8.24□□□□□ -1.09
RTN3-202ENST00000339997 SEC22AQ96IW7 307 aa8.24□□□□□ -1.09
RTN3-202ENST00000339997 ZNF300Q96RE9 604 aaPredicted RBP8.24□□□□□ -1.09
RTN3-202ENST00000339997 METTL17Q9H7H0 456 aaPredicted RBP8.24□□□□□ -1.09
RTN3-202ENST00000339997 MED20Q9H944 212 aa8.24□□□□□ -1.09
RTN3-202ENST00000339997 OSGIN1Q9UJX0 560 aa8.24□□□□□ -1.09
RTN3-202ENST00000339997 AP1M2Q9Y6Q5 423 aa8.24□□□□□ -1.09
RTN3-202ENST00000339997 SLIT3O75094 1523 aa8.23□□□□□ -1.09
RTN3-202ENST00000339997 MDFIC2A0A1B0GVS7 189 aa8.23□□□□□ -1.09
RTN3-202ENST00000339997 GABRR3A8MPY1 467 aa8.23□□□□□ -1.09
RTN3-202ENST00000339997 SCAMP2O15127 329 aaKnown RBP8.23□□□□□ -1.09
RTN3-202ENST00000339997 AHSA1O95433 338 aa8.23□□□□□ -1.09
RTN3-202ENST00000339997 B3GALT4O96024 378 aa8.23□□□□□ -1.09
RTN3-202ENST00000339997 TP53P04637 393 aaPredicted RBP8.23□□□□□ -1.09
RTN3-202ENST00000339997 ADH5P11766 374 aa8.23□□□□□ -1.09
RTN3-202ENST00000339997 WNT4P56705 351 aa8.23□□□□□ -1.09
RTN3-202ENST00000339997 SELENOWP63302 87 aa8.23□□□□□ -1.09
RTN3-202ENST00000339997 RNASE10Q5GAN6 216 aaKnown RBP8.23□□□□□ -1.09
RTN3-202ENST00000339997 TMEM225Q6GV28 225 aa8.23□□□□□ -1.09
RTN3-202ENST00000339997 USP53Q70EK8 1073 aa8.23□□□□□ -1.09
RTN3-202ENST00000339997 CYS1Q717R9 158 aa8.23□□□□□ -1.09
RTN3-202ENST00000339997 PDZD3Q86UT5 571 aa8.23□□□□□ -1.09
RTN3-202ENST00000339997 UBQLNLQ8IYU4 475 aa8.23□□□□□ -1.09
RTN3-202ENST00000339997 OR5P2Q8WZ92 322 aa8.23□□□□□ -1.09
RTN3-202ENST00000339997 OR51J1Q9H342 316 aa8.23□□□□□ -1.09
RTN3-202ENST00000339997 BIN3Q9NQY0 253 aa8.23□□□□□ -1.09
RTN3-202ENST00000339997 SPEF2Q9C093 1822 aa8.23□□□□□ -1.09
RTN3-202ENST00000339997 F2P00734 622 aa8.23□□□□□ -1.09
RTN3-202ENST00000339997 ALPLP05186 524 aa8.23□□□□□ -1.09
RTN3-202ENST00000339997 CBSLP0DN79 551 aa8.23□□□□□ -1.09
RTN3-202ENST00000339997 HOXD8P13378 290 aaPredicted RBP8.23□□□□□ -1.09
RTN3-202ENST00000339997 OSMP13725 252 aa8.23□□□□□ -1.09
RTN3-202ENST00000339997 PROZP22891 400 aa8.23□□□□□ -1.09
RTN3-202ENST00000339997 CBSP35520 551 aa8.23□□□□□ -1.09
RTN3-202ENST00000339997 NRIP1P48552 1158 aa8.23□□□□□ -1.09
RTN3-202ENST00000339997 FXYD4P59646 89 aa8.23□□□□□ -1.09
RTN3-202ENST00000339997 GAB1Q13480 694 aa8.23□□□□□ -1.09
RTN3-202ENST00000339997 GPR19Q15760 415 aa8.23□□□□□ -1.09
RTN3-202ENST00000339997 CMPK2Q5EBM0 449 aa8.23□□□□□ -1.09
RTN3-202ENST00000339997 C6orf132Q5T0Z8 1188 aa8.23□□□□□ -1.09
RTN3-202ENST00000339997 PIP5KL1Q5T9C9 394 aa8.23□□□□□ -1.09
RTN3-202ENST00000339997 HACD2Q6Y1H2 254 aa8.23□□□□□ -1.09
RTN3-202ENST00000339997 ABHD13Q7L211 337 aa8.23□□□□□ -1.09
RTN3-202ENST00000339997 CAMKVQ8NCB2 501 aa8.23□□□□□ -1.09
RTN3-202ENST00000339997 NEIL2Q969S2 332 aa8.23□□□□□ -1.09
RTN3-202ENST00000339997 RHBDF1Q96CC6 855 aa8.23□□□□□ -1.09
RTN3-202ENST00000339997 PFDN5Q99471 154 aa8.23□□□□□ -1.09
RTN3-202ENST00000339997 ORAI3Q9BRQ5 295 aa8.23□□□□□ -1.09
RTN3-202ENST00000339997 ALG8Q9BVK2 526 aa8.23□□□□□ -1.09
RTN3-202ENST00000339997 ZMAT3Q9HA38 289 aaKnown RBP8.23□□□□□ -1.09
RTN3-202ENST00000339997 GALNT9Q9HCQ5 603 aa8.23□□□□□ -1.09
RTN3-202ENST00000339997 PRSS21Q9Y6M0 314 aa8.23□□□□□ -1.09
RTN3-202ENST00000339997 CICQ96RK0 1608 aaPredicted RBP8.23□□□□□ -1.09
RTN3-202ENST00000339997 C2orf74A8MZ97 194 aa8.23□□□□□ -1.09
RTN3-202ENST00000339997 TOR1AO14656 332 aa8.23□□□□□ -1.09
RTN3-202ENST00000339997 FBXO24O75426 580 aa8.23□□□□□ -1.09
RTN3-202ENST00000339997 OR8U9P0C7N5 309 aa8.23□□□□□ -1.09
RTN3-202ENST00000339997 C7P10643 843 aa8.23□□□□□ -1.09
RTN3-202ENST00000339997 CASP3P42574 277 aa8.23□□□□□ -1.09
RTN3-202ENST00000339997 AKR1C2P52895 323 aa8.23□□□□□ -1.09
RTN3-202ENST00000339997 CTBP2P56545 445 aa8.23□□□□□ -1.09
RTN3-202ENST00000339997 INHBEP58166 350 aa8.23□□□□□ -1.09
RTN3-202ENST00000339997 GABARAPL2P60520 117 aa8.23□□□□□ -1.09
RTN3-202ENST00000339997 S100A12P80511 92 aa8.23□□□□□ -1.09
RTN3-202ENST00000339997 AKR1C1Q04828 323 aa8.23□□□□□ -1.09
RTN3-202ENST00000339997 DECR1Q16698 335 aa8.23□□□□□ -1.09
RTN3-202ENST00000339997 ITPRIPL2Q3MIP1 535 aa8.23□□□□□ -1.09
RTN3-202ENST00000339997 LIPJQ5W064 366 aa8.23□□□□□ -1.09
RTN3-202ENST00000339997 FRMPD2BQ6IN97 320 aa8.23□□□□□ -1.09
RTN3-202ENST00000339997 ZNF534Q76KX8 674 aa8.23□□□□□ -1.09
RTN3-202ENST00000339997 TMEM25Q86YD3 366 aa8.23□□□□□ -1.09
RTN3-202ENST00000339997 OR5AR1Q8NGP9 310 aa8.23□□□□□ -1.09
RTN3-202ENST00000339997 C16orf78Q8WTQ4 265 aa8.23□□□□□ -1.09
RTN3-202ENST00000339997 TCEAL4Q96EI5 215 aa8.23□□□□□ -1.09
RTN3-202ENST00000339997 GPR174Q9BXC1 333 aa8.23□□□□□ -1.09
RTN3-202ENST00000339997 MKRN2Q9H000 416 aaKnown RBP8.23□□□□□ -1.09
RTN3-202ENST00000339997 FAM124BQ9H5Z6 455 aaPredicted RBP8.23□□□□□ -1.09
RTN3-202ENST00000339997 MRM3Q9HC36 420 aaKnown RBP8.23□□□□□ -1.09
RTN3-202ENST00000339997 ACKR4Q9NPB9 350 aa8.23□□□□□ -1.09
RTN3-202ENST00000339997 RPS10P5Q9NQ39 176 aa8.23□□□□□ -1.09
RTN3-202ENST00000339997 TUBG2Q9NRH3 451 aa8.23□□□□□ -1.09
RTN3-202ENST00000339997 DUOX1Q9NRD9 1551 aa8.23□□□□□ -1.09
RTN3-202ENST00000339997 NPIPB15A6NHN6 443 aaPredicted RBP8.23□□□□□ -1.09
RTN3-202ENST00000339997 TXNDC12O95881 172 aa8.23□□□□□ -1.09
RTN3-202ENST00000339997 RAB6AP20340 208 aa8.23□□□□□ -1.09
RTN3-202ENST00000339997 MSX1P28360 303 aa8.23□□□□□ -1.09
RTN3-202ENST00000339997 PITPNBP48739 271 aa8.23□□□□□ -1.09
RTN3-202ENST00000339997 POU6F2P78424 691 aaPredicted RBP8.23□□□□□ -1.09
RTN3-202ENST00000339997 FADDQ13158 208 aa8.23□□□□□ -1.09
RTN3-202ENST00000339997 UBXN2BQ14CS0 331 aa8.23□□□□□ -1.09
RTN3-202ENST00000339997 CDK10Q15131 360 aa8.23□□□□□ -1.09
RTN3-202ENST00000339997 P2RY14Q15391 338 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms