RNA–Protein interactions for RNA: ENST00000339865.9

USP47-202, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2 BASIC

Gene USP47, Length 7,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-202ENST00000339865 OR5H6Q8NGV6 325 aa12.22□□□□□ -0.45
USP47-202ENST00000339865 AKT1S1Q96B36 256 aa12.22□□□□□ -0.45
USP47-202ENST00000339865 FZD10Q9ULW2 581 aa12.22□□□□□ -0.45
USP47-202ENST00000339865 CEMIPQ8WUJ3 1361 aa12.22□□□□□ -0.45
USP47-202ENST00000339865 MED12Q93074 2177 aa12.22□□□□□ -0.45
USP47-202ENST00000339865 L1CAMP32004 1257 aa12.22□□□□□ -0.45
USP47-202ENST00000339865 BDKRB1P46663 353 aa12.22□□□□□ -0.45
USP47-202ENST00000339865 PPP1R3AQ16821 1122 aa12.22□□□□□ -0.45
USP47-202ENST00000339865 GDPD4Q6W3E5 623 aa12.22□□□□□ -0.45
USP47-202ENST00000339865 SEMA6DQ8NFY4 1073 aa12.22□□□□□ -0.45
USP47-202ENST00000339865 OR56B4Q8NH76 319 aa12.22□□□□□ -0.45
USP47-202ENST00000339865 DOHHQ9BU89 302 aa12.22□□□□□ -0.45
USP47-202ENST00000339865 NENFQ9UMX5 172 aa12.22□□□□□ -0.45
USP47-202ENST00000339865 LOC105369274A0A096LPK9 316 aa12.22□□□□□ -0.45
USP47-202ENST00000339865 H3BMQ9 156 aa12.22□□□□□ -0.45
USP47-202ENST00000339865 ARPC1BO15143 372 aaKnown RBP12.22□□□□□ -0.45
USP47-202ENST00000339865 DPM1O60762 260 aa12.22□□□□□ -0.45
USP47-202ENST00000339865 MPIG6BO95866 241 aa12.22□□□□□ -0.45
USP47-202ENST00000339865 SF3A2Q15428 464 aaKnown RBP12.22□□□□□ -0.45
USP47-202ENST00000339865 PLBD1Q6P4A8 553 aa12.22□□□□□ -0.45
USP47-202ENST00000339865 ZNF551Q7Z340 670 aaPredicted RBP12.22□□□□□ -0.45
USP47-202ENST00000339865 OR4N4Q8N0Y3 316 aa12.22□□□□□ -0.45
USP47-202ENST00000339865 SYNPRQ8TBG9 265 aa12.22□□□□□ -0.45
USP47-202ENST00000339865 C14orf79Q96F83 325 aa12.22□□□□□ -0.45
USP47-202ENST00000339865 PIP5K1AQ99755 562 aa12.22□□□□□ -0.45
USP47-202ENST00000339865 OPA3Q9H6K4 179 aa12.22□□□□□ -0.45
USP47-202ENST00000339865 SERTM1A2A2V5 107 aa12.22□□□□□ -0.45
USP47-202ENST00000339865 CXorf49A8MYA2 514 aaPredicted RBP12.22□□□□□ -0.45
USP47-202ENST00000339865 NFATC3Q12968 1075 aa12.22□□□□□ -0.45
USP47-202ENST00000339865 ARL14EPQ8N8R7 260 aaPredicted RBP12.22□□□□□ -0.45
USP47-202ENST00000339865 P2RX7Q99572 595 aaKnown RBP12.22□□□□□ -0.45
USP47-202ENST00000339865 LHPPQ9H008 270 aa12.22□□□□□ -0.45
USP47-202ENST00000339865 NTN4Q9HB63 628 aa12.22□□□□□ -0.45
USP47-202ENST00000339865 FBXW11Q9UKB1 542 aa12.22□□□□□ -0.45
USP47-202ENST00000339865 MEIOCA2RUB1 952 aa12.21□□□□□ -0.45
USP47-202ENST00000339865 PPP1R2P9O14990 202 aa12.21□□□□□ -0.45
USP47-202ENST00000339865 RRP8O43159 456 aaKnown RBP12.21□□□□□ -0.45
USP47-202ENST00000339865 PABPC4LP0CB38 370 aaKnown RBP12.21□□□□□ -0.45
USP47-202ENST00000339865 TRHRP34981 398 aaPredicted RBP12.21□□□□□ -0.45
USP47-202ENST00000339865 PTGER4P35408 488 aa12.21□□□□□ -0.45
USP47-202ENST00000339865 UBE2NP61088 152 aaKnown RBP12.21□□□□□ -0.45
USP47-202ENST00000339865 MMAAQ8IVH4 418 aaKnown RBP12.21□□□□□ -0.45
USP47-202ENST00000339865 UPRTQ96BW1 309 aa12.21□□□□□ -0.45
USP47-202ENST00000339865 MINDY3Q9H8M7 445 aa12.21□□□□□ -0.45
USP47-202ENST00000339865 RIC1Q4ADV7 1423 aa12.21□□□□□ -0.45
USP47-202ENST00000339865 SBK2P0C263 348 aa12.21□□□□□ -0.45
USP47-202ENST00000339865 FLI1Q01543 452 aaPredicted RBP12.21□□□□□ -0.45
USP47-202ENST00000339865 ZNF630Q2M218 657 aaPredicted RBP12.21□□□□□ -0.45
USP47-202ENST00000339865 METTL2BQ6P1Q9 378 aaKnown RBP12.21□□□□□ -0.45
USP47-202ENST00000339865 LEG1Q6P5S2 330 aa12.21□□□□□ -0.45
USP47-202ENST00000339865 IL34Q6ZMJ4 242 aa12.21□□□□□ -0.45
USP47-202ENST00000339865 NUP43Q8NFH3 380 aa12.21□□□□□ -0.45
USP47-202ENST00000339865 C20orf24Q9BUV8 137 aa12.21□□□□□ -0.45
USP47-202ENST00000339865 FAM212BQ9NTI7 297 aaPredicted RBP12.21□□□□□ -0.45
USP47-202ENST00000339865 CLCF1Q9UBD9 225 aa12.21□□□□□ -0.45
USP47-202ENST00000339865 ATRXP46100 2492 aa12.21□□□□□ -0.45
USP47-202ENST00000339865 A8MVM7 634 aa12.21□□□□□ -0.45
USP47-202ENST00000339865 INHAP05111 366 aa12.21□□□□□ -0.45
USP47-202ENST00000339865 GLI2P10070 1586 aa12.21□□□□□ -0.45
USP47-202ENST00000339865 BCKDHBP21953 392 aa12.21□□□□□ -0.45
USP47-202ENST00000339865 UQCRC2P22695 453 aa12.21□□□□□ -0.45
USP47-202ENST00000339865 STEAP3Q658P3 488 aa12.21□□□□□ -0.45
USP47-202ENST00000339865 FAM109AQ8N4B1 249 aa12.21□□□□□ -0.45
USP47-202ENST00000339865 LINC00116Q8NCU8 138 aa12.21□□□□□ -0.45
USP47-202ENST00000339865 ZNF461Q8TAF7 563 aa12.21□□□□□ -0.45
USP47-202ENST00000339865 SLC16A10Q8TF71 515 aa12.21□□□□□ -0.45
USP47-202ENST00000339865 SENP5Q96HI0 755 aaPredicted RBP12.21□□□□□ -0.45
USP47-202ENST00000339865 TEPSINQ96N21 525 aa12.21□□□□□ -0.45
USP47-202ENST00000339865 OR52A5Q9H2C5 316 aa12.21□□□□□ -0.45
USP47-202ENST00000339865 RANGRFQ9HD47 186 aaPredicted RBP12.21□□□□□ -0.45
USP47-202ENST00000339865 GAB2Q9UQC2 676 aa12.21□□□□□ -0.45
USP47-202ENST00000339865 KLRG2A4D1S0 409 aaPredicted RBP12.21□□□□□ -0.46
USP47-202ENST00000339865 FANCGO15287 622 aa12.21□□□□□ -0.46
USP47-202ENST00000339865 RAD1O60671 282 aa12.21□□□□□ -0.46
USP47-202ENST00000339865 ANXA7P20073 488 aaKnown RBP12.21□□□□□ -0.46
USP47-202ENST00000339865 GPR143P51810 404 aa12.21□□□□□ -0.46
USP47-202ENST00000339865 LSAMPQ13449 338 aa12.21□□□□□ -0.46
USP47-202ENST00000339865 CCNJQ5T5M9 372 aa12.21□□□□□ -0.46
USP47-202ENST00000339865 ILDR1Q86SU0 546 aaPredicted RBP12.21□□□□□ -0.46
USP47-202ENST00000339865 TMEM130Q8N3G9 435 aa12.21□□□□□ -0.46
USP47-202ENST00000339865 VSX1Q9NZR4 365 aaPredicted RBP12.21□□□□□ -0.46
USP47-202ENST00000339865 KRBOX1C9JBD0 128 aa12.21□□□□□ -0.46
USP47-202ENST00000339865 MT-ND4P03905 459 aa12.21□□□□□ -0.46
USP47-202ENST00000339865 CTRB1P17538 263 aa12.21□□□□□ -0.46
USP47-202ENST00000339865 NTF3P20783 257 aa12.21□□□□□ -0.46
USP47-202ENST00000339865 CA5AP35218 305 aa12.21□□□□□ -0.46
USP47-202ENST00000339865 GDF10P55107 478 aa12.21□□□□□ -0.46
USP47-202ENST00000339865 ZNF169Q14929 603 aaPredicted RBP12.21□□□□□ -0.46
USP47-202ENST00000339865 HMGN3Q15651 99 aa12.21□□□□□ -0.46
USP47-202ENST00000339865 CTRB2Q6GPI1 263 aa12.21□□□□□ -0.46
USP47-202ENST00000339865 ADAMTS19Q8TE59 1207 aa12.21□□□□□ -0.46
USP47-202ENST00000339865 DNAJC19Q96DA6 116 aa12.21□□□□□ -0.46
USP47-202ENST00000339865 THAP7Q9BT49 309 aaPredicted RBP12.21□□□□□ -0.46
USP47-202ENST00000339865 ZDHHC11Q9H8X9 412 aa12.21□□□□□ -0.46
USP47-202ENST00000339865 SIDT1Q9NXL6 827 aaKnown RBP12.21□□□□□ -0.46
USP47-202ENST00000339865 V9GYS6 101 aa12.21□□□□□ -0.46
USP47-202ENST00000339865 A6NIN4 97 aa12.21□□□□□ -0.46
USP47-202ENST00000339865 WDR4P57081 412 aaKnown RBP12.21□□□□□ -0.46
USP47-202ENST00000339865 ATP6AP1Q15904 470 aa12.21□□□□□ -0.46
USP47-202ENST00000339865 CES4AQ5XG92 561 aa12.21□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms