RNA–Protein interactions for RNA: ENST00000337620.8

CBX3-201, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-201ENST00000337620 IL7RP16871 459 aa13.62□□□□□ -0.23
CBX3-201ENST00000337620 TRHRP34981 398 aaPredicted RBP13.62□□□□□ -0.23
CBX3-201ENST00000337620 C3orf38Q5JPI3 329 aa13.62□□□□□ -0.23
CBX3-201ENST00000337620 TMEM179BQ7Z7N9 219 aa13.62□□□□□ -0.23
CBX3-201ENST00000337620 COMTD1Q86VU5 262 aa13.62□□□□□ -0.23
CBX3-201ENST00000337620 ZNF619Q8N2I2 560 aa13.62□□□□□ -0.23
CBX3-201ENST00000337620 MORN4Q8NDC4 146 aa13.62□□□□□ -0.23
CBX3-201ENST00000337620 OR1N1Q8NGS0 311 aa13.62□□□□□ -0.23
CBX3-201ENST00000337620 SDCCAG3Q96C92 435 aa13.62□□□□□ -0.23
CBX3-201ENST00000337620 ZNF347Q96SE7 839 aa13.62□□□□□ -0.23
CBX3-201ENST00000337620 WFDC6Q9BQY6 131 aa13.62□□□□□ -0.23
CBX3-201ENST00000337620 REEP1Q9H902 201 aa13.62□□□□□ -0.23
CBX3-201ENST00000337620 WDR54Q9H977 334 aa13.62□□□□□ -0.23
CBX3-201ENST00000337620 SLC13A4Q9UKG4 626 aa13.62□□□□□ -0.23
CBX3-201ENST00000337620 NXT1Q9UKK6 140 aaKnown RBP13.62□□□□□ -0.23
CBX3-201ENST00000337620 ZNF232Q9UNY5 417 aa13.62□□□□□ -0.23
CBX3-201ENST00000337620 CFL2Q9Y281 166 aa13.62□□□□□ -0.23
CBX3-201ENST00000337620 IFT52Q9Y366 437 aa13.62□□□□□ -0.23
CBX3-201ENST00000337620 TESMINQ9Y4I5 508 aa13.62□□□□□ -0.23
CBX3-201ENST00000337620 ZNF292O60281 2723 aa13.62□□□□□ -0.23
CBX3-201ENST00000337620 A0A1W2PNU3 283 aaPredicted RBP13.61□□□□□ -0.23
CBX3-201ENST00000337620 M0R3H8 397 aa13.61□□□□□ -0.23
CBX3-201ENST00000337620 EI24O14681 340 aa13.61□□□□□ -0.23
CBX3-201ENST00000337620 BRINP1O60477 761 aa13.61□□□□□ -0.23
CBX3-201ENST00000337620 FTH1P19P0C7X4 201 aa13.61□□□□□ -0.23
CBX3-201ENST00000337620 CDK4P11802 303 aa13.61□□□□□ -0.23
CBX3-201ENST00000337620 ATP6V1C1P21283 382 aa13.61□□□□□ -0.23
CBX3-201ENST00000337620 RRM2P31350 389 aa13.61□□□□□ -0.23
CBX3-201ENST00000337620 FOXD4Q12950 439 aaPredicted RBP13.61□□□□□ -0.23
CBX3-201ENST00000337620 EIF3IQ13347 325 aaKnown RBP13.61□□□□□ -0.23
CBX3-201ENST00000337620 FLYWCH1Q4VC44 716 aa13.61□□□□□ -0.23
CBX3-201ENST00000337620 FAM198BQ6UWH4 519 aa13.61□□□□□ -0.23
CBX3-201ENST00000337620 ZAR1Q86SH2 424 aa13.61□□□□□ -0.23
CBX3-201ENST00000337620 RBM45Q8IUH3 476 aaKnown RBP13.61□□□□□ -0.23
CBX3-201ENST00000337620 HS3ST5Q8IZT8 346 aa13.61□□□□□ -0.23
CBX3-201ENST00000337620 AMER2Q8N7J2 671 aa13.61□□□□□ -0.23
CBX3-201ENST00000337620 OR5K1Q8NHB7 308 aa13.61□□□□□ -0.23
CBX3-201ENST00000337620 APOBEC4Q8WW27 367 aaKnown RBP13.61□□□□□ -0.23
CBX3-201ENST00000337620 GAL3ST4Q96RP7 486 aa13.61□□□□□ -0.23
CBX3-201ENST00000337620 DDA1Q9BW61 102 aa13.61□□□□□ -0.23
CBX3-201ENST00000337620 CBLCQ9ULV8 474 aa13.61□□□□□ -0.23
CBX3-201ENST00000337620 GPR55Q9Y2T6 319 aaPredicted RBP13.61□□□□□ -0.23
CBX3-201ENST00000337620 SAMHD1Q9Y3Z3 626 aaKnown RBP13.61□□□□□ -0.23
CBX3-201ENST00000337620 ENPP4Q9Y6X5 453 aa13.61□□□□□ -0.23
CBX3-201ENST00000337620 C2orf92A0A1B0GVN3 265 aa13.61□□□□□ -0.23
CBX3-201ENST00000337620 TTC36A6NLP5 189 aa13.61□□□□□ -0.23
CBX3-201ENST00000337620 PEX12O00623 359 aa13.61□□□□□ -0.23
CBX3-201ENST00000337620 RASAL1O95294 804 aa13.61□□□□□ -0.23
CBX3-201ENST00000337620 EPPINO95925 133 aa13.61□□□□□ -0.23
CBX3-201ENST00000337620 LGI1O95970 557 aa13.61□□□□□ -0.23
CBX3-201ENST00000337620 IGKV1D-16P01601 117 aa13.61□□□□□ -0.23
CBX3-201ENST00000337620 CCNYL3P0C7X3 344 aa13.61□□□□□ -0.23
CBX3-201ENST00000337620 PIGAP37287 484 aa13.61□□□□□ -0.23
CBX3-201ENST00000337620 DCTP40126 519 aa13.61□□□□□ -0.23
CBX3-201ENST00000337620 LARS2Q15031 903 aaKnown RBP13.61□□□□□ -0.23
CBX3-201ENST00000337620 NCF4Q15080 339 aa13.61□□□□□ -0.23
CBX3-201ENST00000337620 TMEM164Q5U3C3 297 aa13.61□□□□□ -0.23
CBX3-201ENST00000337620 C6orf15Q6UXA7 325 aaPredicted RBP13.61□□□□□ -0.23
CBX3-201ENST00000337620 ZNF517Q6ZMY9 492 aaPredicted RBP13.61□□□□□ -0.23
CBX3-201ENST00000337620 DEF8Q6ZN54 512 aa13.61□□□□□ -0.23
CBX3-201ENST00000337620 CPEB2Q7Z5Q1 589 aaKnown RBP13.61□□□□□ -0.23
CBX3-201ENST00000337620 LACC1Q8IV20 430 aa13.61□□□□□ -0.23
CBX3-201ENST00000337620 SVOPLQ8N434 492 aa13.61□□□□□ -0.23
CBX3-201ENST00000337620 OR4D11Q8NGI4 311 aa13.61□□□□□ -0.23
CBX3-201ENST00000337620 WDR36Q8NI36 951 aaKnown RBP13.61□□□□□ -0.23
CBX3-201ENST00000337620 MAGEE2Q8TD90 523 aaPredicted RBP13.61□□□□□ -0.23
CBX3-201ENST00000337620 C8orf44Q96CB5 159 aa13.61□□□□□ -0.23
CBX3-201ENST00000337620 BTBD9Q96Q07 612 aa13.61□□□□□ -0.23
CBX3-201ENST00000337620 PHOX2BQ99453 314 aa13.61□□□□□ -0.23
CBX3-201ENST00000337620 SAP130Q9H0E3 1048 aa13.61□□□□□ -0.23
CBX3-201ENST00000337620 PADI1Q9ULC6 663 aa13.61□□□□□ -0.23
CBX3-201ENST00000337620 ZNF443Q9Y2A4 671 aaPredicted RBP13.61□□□□□ -0.23
CBX3-201ENST00000337620 SLC9A8Q9Y2E8 581 aa13.61□□□□□ -0.23
CBX3-201ENST00000337620 PTRH2Q9Y3E5 179 aaKnown RBP13.61□□□□□ -0.23
CBX3-201ENST00000337620 DMXL1Q9Y485 3027 aa13.61□□□□□ -0.23
CBX3-201ENST00000337620 CENPVL1A0A0U1RR11 272 aa13.6□□□□□ -0.23
CBX3-201ENST00000337620 C7orf72A4D263 438 aa13.6□□□□□ -0.23
CBX3-201ENST00000337620 AGAP5A6NIR3 686 aa13.6□□□□□ -0.23
CBX3-201ENST00000337620 CLDN24A6NM45 220 aa13.6□□□□□ -0.23
CBX3-201ENST00000337620 C9orf172C9J069 976 aa13.6□□□□□ -0.23
CBX3-201ENST00000337620 KIAA0513O60268 411 aa13.6□□□□□ -0.23
CBX3-201ENST00000337620 PRKACGP22612 351 aa13.6□□□□□ -0.23
CBX3-201ENST00000337620 PRKAR1BP31321 381 aa13.6□□□□□ -0.23
CBX3-201ENST00000337620 DNAJA1P31689 397 aaKnown RBP13.6□□□□□ -0.23
CBX3-201ENST00000337620 PPICP45877 212 aa13.6□□□□□ -0.23
CBX3-201ENST00000337620 RNF144AP50876 292 aaPredicted RBP13.6□□□□□ -0.23
CBX3-201ENST00000337620 ARHGDIAP52565 204 aa13.6□□□□□ -0.23
CBX3-201ENST00000337620 SPIBQ01892 262 aa13.6□□□□□ -0.23
CBX3-201ENST00000337620 GANABQ14697 944 aaKnown RBP13.6□□□□□ -0.23
CBX3-201ENST00000337620 LAPTM4AQ15012 233 aa13.6□□□□□ -0.23
CBX3-201ENST00000337620 MAPK14Q16539 360 aa13.6□□□□□ -0.23
CBX3-201ENST00000337620 HLA-DQA1Q5Y7H0 255 aa13.6□□□□□ -0.23
CBX3-201ENST00000337620 SLC29A4Q7RTT9 530 aa13.6□□□□□ -0.23
CBX3-201ENST00000337620 C9orf40Q8IXQ3 194 aa13.6□□□□□ -0.23
CBX3-201ENST00000337620 CLIP4Q8N3C7 705 aa13.6□□□□□ -0.23
CBX3-201ENST00000337620 PACRGLQ8N7B6 248 aa13.6□□□□□ -0.23
CBX3-201ENST00000337620 BCORP1Q8N888 145 aa13.6□□□□□ -0.23
CBX3-201ENST00000337620 OR52J3Q8NH60 311 aa13.6□□□□□ -0.23
CBX3-201ENST00000337620 NXF5Q9H1B4 397 aaKnown RBP13.6□□□□□ -0.23
CBX3-201ENST00000337620 POLE3Q9NRF9 147 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms