RNA–Protein interactions for RNA: ENST00000334859.8

LRCH3-201, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LRCH3, Length 2,258 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-201ENST00000334859 OMPP47874 163 aa16.56■□□□□ 0.24
LRCH3-201ENST00000334859 HNRNPA0Q13151 305 aaKnown RBP16.56■□□□□ 0.24
LRCH3-201ENST00000334859 SELENBP1Q13228 472 aa16.56■□□□□ 0.24
LRCH3-201ENST00000334859 LARS2Q15031 903 aaKnown RBP16.56■□□□□ 0.24
LRCH3-201ENST00000334859 FLYWCH1Q4VC44 716 aa16.56■□□□□ 0.24
LRCH3-201ENST00000334859 PRRT3Q5FWE3 981 aa16.56■□□□□ 0.24
LRCH3-201ENST00000334859 FRRS1Q6ZNA5 592 aa16.56■□□□□ 0.24
LRCH3-201ENST00000334859 ACOT11Q8WXI4 607 aaPredicted RBP16.56■□□□□ 0.24
LRCH3-201ENST00000334859 ASB15Q8WXK1 588 aa16.56■□□□□ 0.24
LRCH3-201ENST00000334859 KLF15Q9UIH9 416 aa16.56■□□□□ 0.24
LRCH3-201ENST00000334859 PHF11Q9UIL8 331 aa16.56■□□□□ 0.24
LRCH3-201ENST00000334859 ZNF443Q9Y2A4 671 aaPredicted RBP16.56■□□□□ 0.24
LRCH3-201ENST00000334859 WDR45Q9Y484 360 aa16.56■□□□□ 0.24
LRCH3-201ENST00000334859 GSAPA4D1B5 854 aa16.56■□□□□ 0.24
LRCH3-201ENST00000334859 P2RX6O15547 441 aa16.56■□□□□ 0.24
LRCH3-201ENST00000334859 PIP5K1CO60331 668 aa16.56■□□□□ 0.24
LRCH3-201ENST00000334859 KLF8O95600 359 aaPredicted RBP16.56■□□□□ 0.24
LRCH3-201ENST00000334859 GAS1P54826 345 aa16.56■□□□□ 0.24
LRCH3-201ENST00000334859 CDH11P55287 796 aa16.56■□□□□ 0.24
LRCH3-201ENST00000334859 RPS25P62851 125 aaKnown RBP16.56■□□□□ 0.24
LRCH3-201ENST00000334859 PSPHP78330 225 aa16.56■□□□□ 0.24
LRCH3-201ENST00000334859 PUS10Q3MIT2 529 aaKnown RBP16.56■□□□□ 0.24
LRCH3-201ENST00000334859 ANKRD54Q6NXT1 300 aa16.56■□□□□ 0.24
LRCH3-201ENST00000334859 LSRQ86X29 649 aaPredicted RBP16.56■□□□□ 0.24
LRCH3-201ENST00000334859 TMEM255BQ8WV15 326 aa16.56■□□□□ 0.24
LRCH3-201ENST00000334859 TM9SF4Q92544 642 aa16.56■□□□□ 0.24
LRCH3-201ENST00000334859 FAM131CQ96AQ9 280 aa16.56■□□□□ 0.24
LRCH3-201ENST00000334859 SLC22A18Q96BI1 424 aa16.56■□□□□ 0.24
LRCH3-201ENST00000334859 C1GALT1C1Q96EU7 318 aa16.56■□□□□ 0.24
LRCH3-201ENST00000334859 SLC41A3Q96GZ6 507 aa16.56■□□□□ 0.24
LRCH3-201ENST00000334859 GABRG3Q99928 467 aa16.56■□□□□ 0.24
LRCH3-201ENST00000334859 ANKRD19PQ9H560 264 aa16.56■□□□□ 0.24
LRCH3-201ENST00000334859 IL20RAQ9UHF4 553 aa16.56■□□□□ 0.24
LRCH3-201ENST00000334859 V9GYH0 126 aa16.56■□□□□ 0.24
LRCH3-201ENST00000334859 TICRRQ7Z2Z1 1910 aa16.55■□□□□ 0.24
LRCH3-201ENST00000334859 A0A1W2PQF6 199 aa16.55■□□□□ 0.24
LRCH3-201ENST00000334859 TMEM129A0AVI4 362 aa16.55■□□□□ 0.24
LRCH3-201ENST00000334859 SMIM30A4D0T7 59 aa16.55■□□□□ 0.24
LRCH3-201ENST00000334859 ZNF860A6NHJ4 632 aa16.55■□□□□ 0.24
LRCH3-201ENST00000334859 LRRTM2O43300 516 aa16.55■□□□□ 0.24
LRCH3-201ENST00000334859 RASGRP1O95267 797 aa16.55■□□□□ 0.24
LRCH3-201ENST00000334859 KIAA1024LP59773 190 aa16.55■□□□□ 0.24
LRCH3-201ENST00000334859 ID2Q02363 134 aa16.55■□□□□ 0.24
LRCH3-201ENST00000334859 NFATC4Q14934 902 aa16.55■□□□□ 0.24
LRCH3-201ENST00000334859 SUZ12Q15022 739 aaKnown RBP16.55■□□□□ 0.24
LRCH3-201ENST00000334859 ZMAT1Q5H9K5 638 aa16.55■□□□□ 0.24
LRCH3-201ENST00000334859 CDC73Q6P1J9 531 aa16.55■□□□□ 0.24
LRCH3-201ENST00000334859 SPATC1Q76KD6 591 aa16.55■□□□□ 0.24
LRCH3-201ENST00000334859 GDF7Q7Z4P5 450 aa16.55■□□□□ 0.24
LRCH3-201ENST00000334859 MRGPREQ86SM8 312 aa16.55■□□□□ 0.24
LRCH3-201ENST00000334859 PEX5LQ8IYB4 626 aa16.55■□□□□ 0.24
LRCH3-201ENST00000334859 CELF2-AS1Q8N7Q2 184 aa16.55■□□□□ 0.24
LRCH3-201ENST00000334859 OR4K14Q8NGD5 310 aa16.55■□□□□ 0.24
LRCH3-201ENST00000334859 NT5CQ8TCD5 201 aa16.55■□□□□ 0.24
LRCH3-201ENST00000334859 DOK4Q8TEW6 326 aa16.55■□□□□ 0.24
LRCH3-201ENST00000334859 UFD1Q92890 307 aa16.55■□□□□ 0.24
LRCH3-201ENST00000334859 SLC25A46Q96AG3 418 aa16.55■□□□□ 0.24
LRCH3-201ENST00000334859 SIPA1Q96FS4 1042 aa16.55■□□□□ 0.24
LRCH3-201ENST00000334859 WDR92Q96MX6 357 aa16.55■□□□□ 0.24
LRCH3-201ENST00000334859 TM9SF2Q99805 663 aa16.55■□□□□ 0.24
LRCH3-201ENST00000334859 TEX12Q9BXU0 123 aa16.55■□□□□ 0.24
LRCH3-201ENST00000334859 TMEM168Q9H0V1 697 aa16.55■□□□□ 0.24
LRCH3-201ENST00000334859 FGF20Q9NP95 211 aaPredicted RBP16.55■□□□□ 0.24
LRCH3-201ENST00000334859 EXOSC1Q9Y3B2 195 aaKnown RBP16.55■□□□□ 0.24
LRCH3-201ENST00000334859 CMAHPQ9Y471 501 aa16.55■□□□□ 0.24
LRCH3-201ENST00000334859 CEP290O15078 2479 aa16.55■□□□□ 0.24
LRCH3-201ENST00000334859 SCN2AQ99250 2005 aa16.55■□□□□ 0.24
LRCH3-201ENST00000334859 TMEM221A6NGB7 291 aa16.54■□□□□ 0.24
LRCH3-201ENST00000334859 KDM4EB2RXH2 506 aaPredicted RBP16.54■□□□□ 0.24
LRCH3-201ENST00000334859 B3GALT2O43825 422 aa16.54■□□□□ 0.24
LRCH3-201ENST00000334859 CTSVO60911 334 aa16.54■□□□□ 0.24
LRCH3-201ENST00000334859 CLEC2LP0C7M8 214 aa16.54■□□□□ 0.24
LRCH3-201ENST00000334859 FPR3P25089 353 aa16.54■□□□□ 0.24
LRCH3-201ENST00000334859 DECR1Q16698 335 aa16.54■□□□□ 0.24
LRCH3-201ENST00000334859 CCNJQ5T5M9 372 aa16.54■□□□□ 0.24
LRCH3-201ENST00000334859 TYW3Q6IPR3 259 aaKnown RBP16.54■□□□□ 0.24
LRCH3-201ENST00000334859 HEPHL1Q6MZM0 1159 aa16.54■□□□□ 0.24
LRCH3-201ENST00000334859 NCCRP1Q6ZVX7 275 aaPredicted RBP16.54■□□□□ 0.24
LRCH3-201ENST00000334859 ZFP41Q8N8Y5 198 aa16.54■□□□□ 0.24
LRCH3-201ENST00000334859 OSTF1Q92882 214 aa16.54■□□□□ 0.24
LRCH3-201ENST00000334859 TMCO6Q96DC7 493 aa16.54■□□□□ 0.24
LRCH3-201ENST00000334859 KCTD7Q96MP8 289 aa16.54■□□□□ 0.24
LRCH3-201ENST00000334859 CDCA3Q99618 268 aaPredicted RBP16.54■□□□□ 0.24
LRCH3-201ENST00000334859 SIAEQ9HAT2 523 aa16.54■□□□□ 0.24
LRCH3-201ENST00000334859 CD93Q9NPY3 652 aa16.54■□□□□ 0.24
LRCH3-201ENST00000334859 IQCMA0A1B0GVH7 501 aa16.54■□□□□ 0.24
LRCH3-201ENST00000334859 EPOPA6NHQ4 379 aa16.54■□□□□ 0.24
LRCH3-201ENST00000334859 SLC30A4O14863 429 aa16.54■□□□□ 0.24
LRCH3-201ENST00000334859 IL1AP01583 271 aa16.54■□□□□ 0.24
LRCH3-201ENST00000334859 TLX1P31314 330 aaPredicted RBP16.54■□□□□ 0.24
LRCH3-201ENST00000334859 BNC1Q01954 994 aa16.54■□□□□ 0.24
LRCH3-201ENST00000334859 DUSP5Q16690 384 aa16.54■□□□□ 0.24
LRCH3-201ENST00000334859 CRTC2Q53ET0 693 aaPredicted RBP16.54■□□□□ 0.24
LRCH3-201ENST00000334859 FBXO42Q6P3S6 717 aa16.54■□□□□ 0.24
LRCH3-201ENST00000334859 ZNF836Q6ZNA1 936 aa16.54■□□□□ 0.24
LRCH3-201ENST00000334859 LHFPL3Q86UP9 236 aa16.54■□□□□ 0.24
LRCH3-201ENST00000334859 GALNT12Q8IXK2 581 aa16.54■□□□□ 0.24
LRCH3-201ENST00000334859 SAMD14Q8IZD0 417 aaPredicted RBP16.54■□□□□ 0.24
LRCH3-201ENST00000334859 OR4Q3Q8NH05 313 aa16.54■□□□□ 0.24
LRCH3-201ENST00000334859 RFKQ969G6 155 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms