RNA–Protein interactions for RNA: ENST00000334218.9

CDC42BPA-201, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,134 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-201ENST00000334218 TOP6BLQ8N6T0 577 aa5.79□□□□□ -1.48
CDC42BPA-201ENST00000334218 LRR1Q96L50 414 aa5.79□□□□□ -1.48
CDC42BPA-201ENST00000334218 FCRL1Q96LA6 429 aa5.79□□□□□ -1.48
CDC42BPA-201ENST00000334218 PRAP1Q96NZ9 151 aa5.79□□□□□ -1.48
CDC42BPA-201ENST00000334218 NMUR2Q9GZQ4 415 aa5.79□□□□□ -1.48
CDC42BPA-201ENST00000334218 GBA2Q9HCG7 927 aaPredicted RBP5.79□□□□□ -1.48
CDC42BPA-201ENST00000334218 DDX4Q9NQI0 724 aaKnown RBP5.79□□□□□ -1.48
CDC42BPA-201ENST00000334218 A3GALT2U3KPV4 340 aa5.79□□□□□ -1.48
CDC42BPA-201ENST00000334218 A0A087X1B8 175 aa5.79□□□□□ -1.48
CDC42BPA-201ENST00000334218 ISM1B1AKI9 464 aa5.79□□□□□ -1.48
CDC42BPA-201ENST00000334218 ARHGAP33O14559 1287 aa5.79□□□□□ -1.48
CDC42BPA-201ENST00000334218 AQP8O94778 261 aa5.79□□□□□ -1.48
CDC42BPA-201ENST00000334218 PRAMEF12O95522 483 aa5.79□□□□□ -1.48
CDC42BPA-201ENST00000334218 LINC00614P0C842 121 aa5.79□□□□□ -1.48
CDC42BPA-201ENST00000334218 G6PDP11413 515 aa5.79□□□□□ -1.48
CDC42BPA-201ENST00000334218 RPA3P35244 121 aaPredicted RBP5.79□□□□□ -1.48
CDC42BPA-201ENST00000334218 TMPRSS3P57727 454 aa5.79□□□□□ -1.48
CDC42BPA-201ENST00000334218 OR2AE1Q8NHA4 323 aa5.79□□□□□ -1.48
CDC42BPA-201ENST00000334218 LMX1AQ8TE12 382 aa5.79□□□□□ -1.48
CDC42BPA-201ENST00000334218 FOXJ1Q92949 421 aa5.79□□□□□ -1.48
CDC42BPA-201ENST00000334218 SLC46A2Q9BY10 475 aa5.79□□□□□ -1.48
CDC42BPA-201ENST00000334218 BPIFA1Q9NP55 256 aa5.79□□□□□ -1.48
CDC42BPA-201ENST00000334218 TUBD1Q9UJT1 453 aa5.79□□□□□ -1.48
CDC42BPA-201ENST00000334218 PLAGL2Q9UPG8 496 aa5.79□□□□□ -1.48
CDC42BPA-201ENST00000334218 LRRIQ1Q96JM4 1722 aa5.79□□□□□ -1.48
CDC42BPA-201ENST00000334218 RD3LP0DJH9 198 aa5.79□□□□□ -1.48
CDC42BPA-201ENST00000334218 TAF1CQ15572 869 aaPredicted RBP5.79□□□□□ -1.48
CDC42BPA-201ENST00000334218 TSTQ16762 297 aaKnown RBP5.79□□□□□ -1.48
CDC42BPA-201ENST00000334218 RTL6Q6ICC9 239 aa5.79□□□□□ -1.48
CDC42BPA-201ENST00000334218 TEX29Q8N6K0 151 aa5.79□□□□□ -1.48
CDC42BPA-201ENST00000334218 ZNF454Q8N9F8 522 aa5.79□□□□□ -1.48
CDC42BPA-201ENST00000334218 TMEM74Q96NL1 305 aa5.79□□□□□ -1.48
CDC42BPA-201ENST00000334218 FAM126AQ9BYI3 521 aaPredicted RBP5.79□□□□□ -1.48
CDC42BPA-201ENST00000334218 NXF3Q9H4D5 531 aaKnown RBP5.79□□□□□ -1.48
CDC42BPA-201ENST00000334218 LRRC4CQ9HCJ2 640 aa5.79□□□□□ -1.48
CDC42BPA-201ENST00000334218 NAGPAQ9UK23 515 aa5.79□□□□□ -1.48
CDC42BPA-201ENST00000334218 BTRCQ9Y297 605 aa5.79□□□□□ -1.48
CDC42BPA-201ENST00000334218 MED31Q9Y3C7 131 aa5.79□□□□□ -1.48
CDC42BPA-201ENST00000334218 UNC119BA6NIH7 251 aa5.79□□□□□ -1.48
CDC42BPA-201ENST00000334218 NDUFS3O75489 264 aa5.79□□□□□ -1.48
CDC42BPA-201ENST00000334218 CDS2O95674 445 aa5.79□□□□□ -1.48
CDC42BPA-201ENST00000334218 ACVR2AP27037 513 aa5.79□□□□□ -1.48
CDC42BPA-201ENST00000334218 SLC18A1P54219 525 aa5.79□□□□□ -1.48
CDC42BPA-201ENST00000334218 BCAT1P54687 386 aa5.79□□□□□ -1.48
CDC42BPA-201ENST00000334218 PXDC1Q5TGL8 231 aa5.79□□□□□ -1.48
CDC42BPA-201ENST00000334218 VITQ6UXI7 678 aa5.79□□□□□ -1.48
CDC42BPA-201ENST00000334218 CCDC71LQ8N9Z2 235 aa5.79□□□□□ -1.48
CDC42BPA-201ENST00000334218 OR6N1Q8NGY5 312 aa5.79□□□□□ -1.48
CDC42BPA-201ENST00000334218 ZNF606Q8WXB4 792 aa5.79□□□□□ -1.48
CDC42BPA-201ENST00000334218 ZNF430Q9H8G1 570 aaPredicted RBP5.79□□□□□ -1.48
CDC42BPA-201ENST00000334218 ACKR4Q9NPB9 350 aa5.79□□□□□ -1.48
CDC42BPA-201ENST00000334218 FBXO34Q9NWN3 711 aa5.79□□□□□ -1.48
CDC42BPA-201ENST00000334218 ZNHIT2Q9UHR6 403 aa5.79□□□□□ -1.48
CDC42BPA-201ENST00000334218 RPTORQ8N122 1335 aa5.79□□□□□ -1.48
CDC42BPA-201ENST00000334218 TRABD2BA6NFA1 517 aa5.79□□□□□ -1.48
CDC42BPA-201ENST00000334218 OOEPA6NGQ2 149 aa5.79□□□□□ -1.48
CDC42BPA-201ENST00000334218 TCP10L2B9ZVM9 353 aa5.79□□□□□ -1.48
CDC42BPA-201ENST00000334218 APRTP07741 180 aa5.79□□□□□ -1.48
CDC42BPA-201ENST00000334218 HSD17B4P51659 736 aa5.79□□□□□ -1.48
CDC42BPA-201ENST00000334218 CD47Q08722 323 aa5.79□□□□□ -1.48
CDC42BPA-201ENST00000334218 HEPACAMQ14CZ8 416 aa5.79□□□□□ -1.48
CDC42BPA-201ENST00000334218 TIGD5Q53EQ6 642 aa5.79□□□□□ -1.48
CDC42BPA-201ENST00000334218 MORN3Q6PF18 240 aaPredicted RBP5.79□□□□□ -1.48
CDC42BPA-201ENST00000334218 PIGWQ7Z7B1 504 aa5.79□□□□□ -1.48
CDC42BPA-201ENST00000334218 SIGMAR1Q99720 223 aa5.79□□□□□ -1.48
CDC42BPA-201ENST00000334218 TTYH3Q9C0H2 523 aa5.79□□□□□ -1.48
CDC42BPA-201ENST00000334218 RAB18Q9NP72 206 aa5.79□□□□□ -1.48
CDC42BPA-201ENST00000334218 PGAP2Q9UHJ9 254 aa5.79□□□□□ -1.48
CDC42BPA-201ENST00000334218 FAM155AB1AL88 458 aaPredicted RBP5.78□□□□□ -1.48
CDC42BPA-201ENST00000334218 AP4M1O00189 453 aa5.78□□□□□ -1.48
CDC42BPA-201ENST00000334218 HYAL3O43820 417 aaPredicted RBP5.78□□□□□ -1.48
CDC42BPA-201ENST00000334218 PAEPP09466 180 aa5.78□□□□□ -1.48
CDC42BPA-201ENST00000334218 HIST1H1TP22492 207 aaPredicted RBP5.78□□□□□ -1.48
CDC42BPA-201ENST00000334218 PRCPP42785 496 aa5.78□□□□□ -1.48
CDC42BPA-201ENST00000334218 ERFP50548 548 aa5.78□□□□□ -1.48
CDC42BPA-201ENST00000334218 BEX5Q5H9J7 111 aa5.78□□□□□ -1.48
CDC42BPA-201ENST00000334218 LIPKQ5VXJ0 399 aa5.78□□□□□ -1.48
CDC42BPA-201ENST00000334218 CDCA2Q69YH5 1023 aaPredicted RBP5.78□□□□□ -1.48
CDC42BPA-201ENST00000334218 TRILQ7L0X0 811 aa5.78□□□□□ -1.48
CDC42BPA-201ENST00000334218 TMC8Q8IU68 726 aa5.78□□□□□ -1.48
CDC42BPA-201ENST00000334218 GPR137CQ8N3F9 429 aa5.78□□□□□ -1.48
CDC42BPA-201ENST00000334218 CXorf40BQ96DE9 158 aa5.78□□□□□ -1.48
CDC42BPA-201ENST00000334218 MED12Q93074 2177 aa5.78□□□□□ -1.48
CDC42BPA-201ENST00000334218 SCN10AQ9Y5Y9 1956 aa5.78□□□□□ -1.48
CDC42BPA-201ENST00000334218 PRAMEF22A3QJZ6 481 aa5.78□□□□□ -1.48
CDC42BPA-201ENST00000334218 TMEM221A6NGB7 291 aa5.78□□□□□ -1.48
CDC42BPA-201ENST00000334218 PLRG1O43660 514 aaKnown RBP5.78□□□□□ -1.48
CDC42BPA-201ENST00000334218 OR10H3O60404 316 aa5.78□□□□□ -1.48
CDC42BPA-201ENST00000334218 CA1P00915 261 aaPredicted RBP5.78□□□□□ -1.48
CDC42BPA-201ENST00000334218 RBMXP38159 391 aaKnown RBP5.78□□□□□ -1.48
CDC42BPA-201ENST00000334218 SLC7A9P82251 487 aa5.78□□□□□ -1.48
CDC42BPA-201ENST00000334218 C18orf21Q32NC0 220 aaPredicted RBP5.78□□□□□ -1.48
CDC42BPA-201ENST00000334218 ENTPD8Q5MY95 495 aa5.78□□□□□ -1.48
CDC42BPA-201ENST00000334218 FAM74A1Q5RGS3 127 aa5.78□□□□□ -1.48
CDC42BPA-201ENST00000334218 LINGO4Q6UY18 593 aa5.78□□□□□ -1.48
CDC42BPA-201ENST00000334218 MAMDC2Q7Z304 686 aaPredicted RBP5.78□□□□□ -1.48
CDC42BPA-201ENST00000334218 AMIGO2Q86SJ2 522 aa5.78□□□□□ -1.48
CDC42BPA-201ENST00000334218 VRK2Q86Y07 508 aa5.78□□□□□ -1.48
CDC42BPA-201ENST00000334218 YAF2Q8IY57 180 aa5.78□□□□□ -1.48
CDC42BPA-201ENST00000334218 OR52L2PQ8NGH6 319 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms