RNA–Protein interactions for RNA: ENST00000332797.10

CCDC28A-201, Transcript of coiled-coil domain containing 28A, humanhuman

TSL 1 (best) BASIC

Gene CCDC28A, Length 1,496 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28A-201ENST00000332797 SLC2A7Q6PXP3 512 aa14.57□□□□□ -0.08
CCDC28A-201ENST00000332797 BLOC1S3Q6QNY0 202 aa14.57□□□□□ -0.08
CCDC28A-201ENST00000332797 GALNT11Q8NCW6 608 aa14.57□□□□□ -0.08
CCDC28A-201ENST00000332797 OR5D16Q8NGK9 328 aa14.57□□□□□ -0.08
CCDC28A-201ENST00000332797 SPDL1Q96EA4 605 aa14.57□□□□□ -0.08
CCDC28A-201ENST00000332797 ZNF597Q96LX8 424 aa14.57□□□□□ -0.08
CCDC28A-201ENST00000332797 OR7D2Q96RA2 312 aa14.57□□□□□ -0.08
CCDC28A-201ENST00000332797 BTBD2Q9BX70 525 aa14.57□□□□□ -0.08
CCDC28A-201ENST00000332797 OSBPL11Q9BXB4 747 aa14.57□□□□□ -0.08
CCDC28A-201ENST00000332797 SERHL2Q9H4I8 314 aa14.57□□□□□ -0.08
CCDC28A-201ENST00000332797 ZNF385DQ9H6B1 395 aa14.57□□□□□ -0.08
CCDC28A-201ENST00000332797 IL1RL2Q9HB29 575 aa14.57□□□□□ -0.08
CCDC28A-201ENST00000332797 GALNT9Q9HCQ5 603 aa14.57□□□□□ -0.08
CCDC28A-201ENST00000332797 DUSP22Q9NRW4 184 aa14.57□□□□□ -0.08
CCDC28A-201ENST00000332797 NPIPA1Q9UND3 350 aa14.57□□□□□ -0.08
CCDC28A-201ENST00000332797 WISP2O76076 250 aa14.56□□□□□ -0.08
CCDC28A-201ENST00000332797 KCNK2O95069 426 aa14.56□□□□□ -0.08
CCDC28A-201ENST00000332797 ANP32DO95626 131 aa14.56□□□□□ -0.08
CCDC28A-201ENST00000332797 LSP1P33241 339 aa14.56□□□□□ -0.08
CCDC28A-201ENST00000332797 UQCRFS1P47985 274 aa14.56□□□□□ -0.08
CCDC28A-201ENST00000332797 MASP1P48740 699 aa14.56□□□□□ -0.08
CCDC28A-201ENST00000332797 MAN2A2P49641 1150 aa14.56□□□□□ -0.08
CCDC28A-201ENST00000332797 SEC24CP53992 1094 aa14.56□□□□□ -0.08
CCDC28A-201ENST00000332797 GNGT1P63211 74 aa14.56□□□□□ -0.08
CCDC28A-201ENST00000332797 MRPL49Q13405 166 aaKnown RBP14.56□□□□□ -0.08
CCDC28A-201ENST00000332797 CCNJQ5T5M9 372 aa14.56□□□□□ -0.08
CCDC28A-201ENST00000332797 SLC30A6Q6NXT4 461 aa14.56□□□□□ -0.08
CCDC28A-201ENST00000332797 TMEM81Q6P7N7 255 aa14.56□□□□□ -0.08
CCDC28A-201ENST00000332797 PACS2Q86VP3 889 aa14.56□□□□□ -0.08
CCDC28A-201ENST00000332797 SLC22A16Q86VW1 577 aa14.56□□□□□ -0.08
CCDC28A-201ENST00000332797 SIAH3Q8IW03 269 aa14.56□□□□□ -0.08
CCDC28A-201ENST00000332797 ST6GALNAC3Q8NDV1 305 aa14.56□□□□□ -0.08
CCDC28A-201ENST00000332797 NEURL3Q96EH8 262 aa14.56□□□□□ -0.08
CCDC28A-201ENST00000332797 FAM107BQ9H098 131 aa14.56□□□□□ -0.08
CCDC28A-201ENST00000332797 ZFP64Q9NPA5 681 aa14.56□□□□□ -0.08
CCDC28A-201ENST00000332797 TMEM45AQ9NWC5 275 aa14.56□□□□□ -0.08
CCDC28A-201ENST00000332797 GIN1Q9NXP7 522 aa14.56□□□□□ -0.08
CCDC28A-201ENST00000332797 FLRT3Q9NZU0 649 aa14.56□□□□□ -0.08
CCDC28A-201ENST00000332797 SEC14L3Q9UDX4 400 aa14.56□□□□□ -0.08
CCDC28A-201ENST00000332797 KCNE3Q9Y6H6 103 aa14.56□□□□□ -0.08
CCDC28A-201ENST00000332797 NUP214P35658 2090 aaPredicted RBP14.55□□□□□ -0.08
CCDC28A-201ENST00000332797 C2orf72A6NCS6 295 aa14.55□□□□□ -0.08
CCDC28A-201ENST00000332797 ANKUB1A6NFN9 424 aa14.55□□□□□ -0.08
CCDC28A-201ENST00000332797 LRRC3CA6NJW4 275 aa14.55□□□□□ -0.08
CCDC28A-201ENST00000332797 TRIM3O75382 744 aaPredicted RBP14.55□□□□□ -0.08
CCDC28A-201ENST00000332797 GLSO94925 669 aaPredicted RBP14.55□□□□□ -0.08
CCDC28A-201ENST00000332797 UNC5CO95185 931 aa14.55□□□□□ -0.08
CCDC28A-201ENST00000332797 SNX4O95219 450 aa14.55□□□□□ -0.08
CCDC28A-201ENST00000332797 CBX6O95503 412 aa14.55□□□□□ -0.08
CCDC28A-201ENST00000332797 C1QCP02747 245 aa14.55□□□□□ -0.08
CCDC28A-201ENST00000332797 CD1EP15812 388 aa14.55□□□□□ -0.08
CCDC28A-201ENST00000332797 CAPN3P20807 821 aa14.55□□□□□ -0.08
CCDC28A-201ENST00000332797 GNLYP22749 145 aa14.55□□□□□ -0.08
CCDC28A-201ENST00000332797 EVI2BP34910 448 aa14.55□□□□□ -0.08
CCDC28A-201ENST00000332797 PTGDSP41222 190 aa14.55□□□□□ -0.08
CCDC28A-201ENST00000332797 KHKP50053 298 aa14.55□□□□□ -0.08
CCDC28A-201ENST00000332797 SNTA1Q13424 505 aa14.55□□□□□ -0.08
CCDC28A-201ENST00000332797 ELOAQ14241 798 aaKnown RBP14.55□□□□□ -0.08
CCDC28A-201ENST00000332797 DCST2Q5T1A1 773 aa14.55□□□□□ -0.08
CCDC28A-201ENST00000332797 TNFAIP8L2Q6P589 184 aaPredicted RBP14.55□□□□□ -0.08
CCDC28A-201ENST00000332797 PNPT1Q8TCS8 783 aaKnown RBP14.55□□□□□ -0.08
CCDC28A-201ENST00000332797 C10orf82Q8WW14 230 aa14.55□□□□□ -0.08
CCDC28A-201ENST00000332797 GTF2H4Q92759 462 aa14.55□□□□□ -0.08
CCDC28A-201ENST00000332797 GPR137Q96N19 417 aa14.55□□□□□ -0.08
CCDC28A-201ENST00000332797 OR51I1Q9H343 314 aa14.55□□□□□ -0.08
CCDC28A-201ENST00000332797 SLC6A13Q9NSD5 602 aa14.55□□□□□ -0.08
CCDC28A-201ENST00000332797 PCDHGB3Q9Y5G1 929 aa14.55□□□□□ -0.08
CCDC28A-201ENST00000332797 GNB5O14775 395 aa14.54□□□□□ -0.08
CCDC28A-201ENST00000332797 SCO2O43819 266 aa14.54□□□□□ -0.08
CCDC28A-201ENST00000332797 CDC40O60508 579 aaKnown RBP eCLIP14.54□□□□□ -0.08
CCDC28A-201ENST00000332797 SOX30O94993 753 aa14.54□□□□□ -0.08
CCDC28A-201ENST00000332797 UTS2O95399 124 aa14.54□□□□□ -0.08
CCDC28A-201ENST00000332797 MAGEA5P43359 124 aa14.54□□□□□ -0.08
CCDC28A-201ENST00000332797 TRPC1P48995 793 aa14.54□□□□□ -0.08
CCDC28A-201ENST00000332797 CPEB4Q17RY0 729 aaKnown RBP eCLIP14.54□□□□□ -0.08
CCDC28A-201ENST00000332797 GRAMD1BQ3KR37 738 aa14.54□□□□□ -0.08
CCDC28A-201ENST00000332797 GTDC1Q4AE62 458 aa14.54□□□□□ -0.08
CCDC28A-201ENST00000332797 CMPK2Q5EBM0 449 aa14.54□□□□□ -0.08
CCDC28A-201ENST00000332797 GFRALQ6UXV0 394 aa14.54□□□□□ -0.08
CCDC28A-201ENST00000332797 ZAR1Q86SH2 424 aa14.54□□□□□ -0.08
CCDC28A-201ENST00000332797 RNF130Q86XS8 419 aa14.54□□□□□ -0.08
CCDC28A-201ENST00000332797 FAM109AQ8N4B1 249 aa14.54□□□□□ -0.08
CCDC28A-201ENST00000332797 TMEM251Q8N6I4 163 aa14.54□□□□□ -0.08
CCDC28A-201ENST00000332797 OR52N2Q8NGI0 321 aa14.54□□□□□ -0.08
CCDC28A-201ENST00000332797 FAM110BQ8TC76 370 aa14.54□□□□□ -0.08
CCDC28A-201ENST00000332797 MIPOL1Q8TD10 442 aa14.54□□□□□ -0.08
CCDC28A-201ENST00000332797 TMEM41AQ96HV5 264 aa14.54□□□□□ -0.08
CCDC28A-201ENST00000332797 G6PC3Q9BUM1 346 aa14.54□□□□□ -0.08
CCDC28A-201ENST00000332797 NSRP1Q9H0G5 558 aaKnown RBP14.54□□□□□ -0.08
CCDC28A-201ENST00000332797 DEFB127Q9H1M4 99 aa14.54□□□□□ -0.08
CCDC28A-201ENST00000332797 ZNF703Q9H7S9 590 aaPredicted RBP14.54□□□□□ -0.08
CCDC28A-201ENST00000332797 FBXO34Q9NWN3 711 aa14.54□□□□□ -0.08
CCDC28A-201ENST00000332797 B4GALT7Q9UBV7 327 aa14.54□□□□□ -0.08
CCDC28A-201ENST00000332797 ABCG2Q9UNQ0 655 aa14.54□□□□□ -0.08
CCDC28A-201ENST00000332797 WIF1Q9Y5W5 379 aa14.54□□□□□ -0.08
CCDC28A-201ENST00000332797 DUXAA6NLW8 204 aa14.53□□□□□ -0.08
CCDC28A-201ENST00000332797 ASNA1O43681 348 aa14.53□□□□□ -0.08
CCDC28A-201ENST00000332797 FADS1O60427 444 aa14.53□□□□□ -0.08
CCDC28A-201ENST00000332797 WISP1O95388 367 aa14.53□□□□□ -0.08
CCDC28A-201ENST00000332797 RFPL3SP0C7P2 107 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms