RNA–Protein interactions for RNA: ENST00000332345.10

LIMS1-201, Transcript of LIM zinc finger domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMS1, Length 1,235 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-201ENST00000332345 MAVSQ7Z434 540 aa12.82□□□□□ -0.36
LIMS1-201ENST00000332345 FJX1Q86VR8 437 aa12.82□□□□□ -0.36
LIMS1-201ENST00000332345 EID3Q8N140 333 aa12.82□□□□□ -0.36
LIMS1-201ENST00000332345 SLC16A11Q8NCK7 471 aa12.82□□□□□ -0.36
LIMS1-201ENST00000332345 OR4A15Q8NGL6 344 aa12.82□□□□□ -0.36
LIMS1-201ENST00000332345 JADE3Q92613 823 aa12.82□□□□□ -0.36
LIMS1-201ENST00000332345 NTNG2Q96CW9 530 aa12.82□□□□□ -0.36
LIMS1-201ENST00000332345 CHMP6Q96FZ7 201 aa12.82□□□□□ -0.36
LIMS1-201ENST00000332345 C16orf58Q96GQ5 468 aa12.82□□□□□ -0.36
LIMS1-201ENST00000332345 GNRHR2Q96P88 292 aa12.82□□□□□ -0.36
LIMS1-201ENST00000332345 OR52B2Q96RD2 323 aa12.82□□□□□ -0.36
LIMS1-201ENST00000332345 STACQ99469 402 aa12.82□□□□□ -0.36
LIMS1-201ENST00000332345 YIPF4Q9BSR8 244 aa12.82□□□□□ -0.36
LIMS1-201ENST00000332345 ACTRT3Q9BYD9 372 aa12.82□□□□□ -0.36
LIMS1-201ENST00000332345 EXO5Q9H790 373 aa12.82□□□□□ -0.36
LIMS1-201ENST00000332345 SDHAF3Q9NRP4 125 aa12.82□□□□□ -0.36
LIMS1-201ENST00000332345 DUSP22Q9NRW4 184 aa12.82□□□□□ -0.36
LIMS1-201ENST00000332345 FAM120CQ9NX05 1096 aaKnown RBP12.82□□□□□ -0.36
LIMS1-201ENST00000332345 SUCOQ9UBS9 1254 aaKnown RBP12.82□□□□□ -0.36
LIMS1-201ENST00000332345 TRGV5A0A0B4J1U4 118 aa12.81□□□□□ -0.36
LIMS1-201ENST00000332345 A0A1B0GVC2 190 aa12.81□□□□□ -0.36
LIMS1-201ENST00000332345 GXYLT2A0PJZ3 443 aa12.81□□□□□ -0.36
LIMS1-201ENST00000332345 C2orf72A6NCS6 295 aa12.81□□□□□ -0.36
LIMS1-201ENST00000332345 OR14I1A6ND48 311 aa12.81□□□□□ -0.36
LIMS1-201ENST00000332345 LRRC3CA6NJW4 275 aa12.81□□□□□ -0.36
LIMS1-201ENST00000332345 CCL21O00585 134 aa12.81□□□□□ -0.36
LIMS1-201ENST00000332345 GNB5O14775 395 aa12.81□□□□□ -0.36
LIMS1-201ENST00000332345 POLR3GO15318 223 aaPredicted RBP12.81□□□□□ -0.36
LIMS1-201ENST00000332345 CBR3O75828 277 aa12.81□□□□□ -0.36
LIMS1-201ENST00000332345 TRAPPC6AO75865 159 aa12.81□□□□□ -0.36
LIMS1-201ENST00000332345 CPSF4O95639 269 aaKnown RBP12.81□□□□□ -0.36
LIMS1-201ENST00000332345 IL6P05231 212 aa12.81□□□□□ -0.36
LIMS1-201ENST00000332345 ACP2P11117 423 aa12.81□□□□□ -0.36
LIMS1-201ENST00000332345 ESRRAP11474 423 aaPredicted RBP12.81□□□□□ -0.36
LIMS1-201ENST00000332345 CYP4B1P13584 511 aa12.81□□□□□ -0.36
LIMS1-201ENST00000332345 LCN1P31025 176 aa12.81□□□□□ -0.36
LIMS1-201ENST00000332345 RFX3P48380 749 aa12.81□□□□□ -0.36
LIMS1-201ENST00000332345 MAN2A2P49641 1150 aa12.81□□□□□ -0.36
LIMS1-201ENST00000332345 PHC1P78364 1004 aa12.81□□□□□ -0.36
LIMS1-201ENST00000332345 LASP1Q14847 261 aaKnown RBP12.81□□□□□ -0.36
LIMS1-201ENST00000332345 TOMM20Q15388 145 aa12.81□□□□□ -0.36
LIMS1-201ENST00000332345 FAM174BQ3ZCQ3 159 aa12.81□□□□□ -0.36
LIMS1-201ENST00000332345 PDCD4Q53EL6 469 aaKnown RBP12.81□□□□□ -0.36
LIMS1-201ENST00000332345 SPANXN4Q5MJ08 99 aa12.81□□□□□ -0.36
LIMS1-201ENST00000332345 CDC73Q6P1J9 531 aa12.81□□□□□ -0.36
LIMS1-201ENST00000332345 ANGPTL8Q6UXH0 198 aa12.81□□□□□ -0.36
LIMS1-201ENST00000332345 C6orf120Q7Z4R8 191 aa12.81□□□□□ -0.36
LIMS1-201ENST00000332345 CHERPQ8IWX8 916 aaKnown RBP12.81□□□□□ -0.36
LIMS1-201ENST00000332345 CLECL1Q8IZS7 167 aa12.81□□□□□ -0.36
LIMS1-201ENST00000332345 COX18Q8N8Q8 333 aa12.81□□□□□ -0.36
LIMS1-201ENST00000332345 FAM57AQ8TBR7 257 aa12.81□□□□□ -0.36
LIMS1-201ENST00000332345 ADAMTS15Q8TE58 950 aa12.81□□□□□ -0.36
LIMS1-201ENST00000332345 PIK3R3Q92569 461 aa12.81□□□□□ -0.36
LIMS1-201ENST00000332345 RMND5BQ96G75 393 aaPredicted RBP12.81□□□□□ -0.36
LIMS1-201ENST00000332345 TEX37Q96LM6 180 aa12.81□□□□□ -0.36
LIMS1-201ENST00000332345 G6PC3Q9BUM1 346 aa12.81□□□□□ -0.36
LIMS1-201ENST00000332345 BTBD2Q9BX70 525 aa12.81□□□□□ -0.36
LIMS1-201ENST00000332345 PIGUQ9H490 435 aa12.81□□□□□ -0.36
LIMS1-201ENST00000332345 ZNF703Q9H7S9 590 aaPredicted RBP12.81□□□□□ -0.36
LIMS1-201ENST00000332345 GALNT9Q9HCQ5 603 aa12.81□□□□□ -0.36
LIMS1-201ENST00000332345 MED4Q9NPJ6 270 aa12.81□□□□□ -0.36
LIMS1-201ENST00000332345 TCF7L2Q9NQB0 619 aa12.81□□□□□ -0.36
LIMS1-201ENST00000332345 ZIM2Q9NZV7 527 aa12.81□□□□□ -0.36
LIMS1-201ENST00000332345 ABCG2Q9UNQ0 655 aa12.81□□□□□ -0.36
LIMS1-201ENST00000332345 DOPEY2Q9Y3R5 2298 aa12.81□□□□□ -0.36
LIMS1-201ENST00000332345 NCKAP5O14513 1909 aa12.8□□□□□ -0.36
LIMS1-201ENST00000332345 WIPF3A6NGB9 483 aa12.8□□□□□ -0.36
LIMS1-201ENST00000332345 DUXAA6NLW8 204 aa12.8□□□□□ -0.36
LIMS1-201ENST00000332345 NPIPA2E9PIF3 369 aa12.8□□□□□ -0.36
LIMS1-201ENST00000332345 NPIPA3F8WFD2 350 aa12.8□□□□□ -0.36
LIMS1-201ENST00000332345 AQP7O14520 342 aa12.8□□□□□ -0.36
LIMS1-201ENST00000332345 BCKDKO14874 412 aa12.8□□□□□ -0.36
LIMS1-201ENST00000332345 SNPHO15079 494 aa12.8□□□□□ -0.36
LIMS1-201ENST00000332345 SCN2BO60939 215 aa12.8□□□□□ -0.36
LIMS1-201ENST00000332345 KCNK2O95069 426 aa12.8□□□□□ -0.36
LIMS1-201ENST00000332345 UTS2O95399 124 aa12.8□□□□□ -0.36
LIMS1-201ENST00000332345 LDLRP01130 860 aa12.8□□□□□ -0.36
LIMS1-201ENST00000332345 PGRP06401 933 aa12.8□□□□□ -0.36
LIMS1-201ENST00000332345 TPOP07202 933 aa12.8□□□□□ -0.36
LIMS1-201ENST00000332345 CELA3AP09093 270 aa12.8□□□□□ -0.36
LIMS1-201ENST00000332345 UQCRC2P22695 453 aa12.8□□□□□ -0.36
LIMS1-201ENST00000332345 EVI2BP34910 448 aa12.8□□□□□ -0.36
LIMS1-201ENST00000332345 SOAT1P35610 550 aa12.8□□□□□ -0.36
LIMS1-201ENST00000332345 PTGDSP41222 190 aa12.8□□□□□ -0.36
LIMS1-201ENST00000332345 IDH3AP50213 366 aa12.8□□□□□ -0.36
LIMS1-201ENST00000332345 AQP5P55064 265 aa12.8□□□□□ -0.36
LIMS1-201ENST00000332345 POU6F2P78424 691 aaPredicted RBP12.8□□□□□ -0.36
LIMS1-201ENST00000332345 C3AR1Q16581 482 aa12.8□□□□□ -0.36
LIMS1-201ENST00000332345 DUSP5Q16690 384 aa12.8□□□□□ -0.36
LIMS1-201ENST00000332345 FNDC7Q5VTL7 733 aa12.8□□□□□ -0.36
LIMS1-201ENST00000332345 FGD2Q7Z6J4 655 aa12.8□□□□□ -0.36
LIMS1-201ENST00000332345 ANKRD46Q86W74 232 aa12.8□□□□□ -0.36
LIMS1-201ENST00000332345 DOLPP1Q86YN1 238 aa12.8□□□□□ -0.36
LIMS1-201ENST00000332345 PLCZ1Q86YW0 608 aa12.8□□□□□ -0.36
LIMS1-201ENST00000332345 MIER2Q8N344 545 aa12.8□□□□□ -0.36
LIMS1-201ENST00000332345 FAM110BQ8TC76 370 aa12.8□□□□□ -0.36
LIMS1-201ENST00000332345 SARAFQ96BY9 339 aa12.8□□□□□ -0.36
LIMS1-201ENST00000332345 OR52E6Q96RD3 313 aa12.8□□□□□ -0.36
LIMS1-201ENST00000332345 CCDC28BQ9BUN5 200 aa12.8□□□□□ -0.36
LIMS1-201ENST00000332345 HHATLQ9HCP6 504 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms