RNA–Protein interactions for RNA: ENST00000330943.8

SNX20-202, Transcript of sorting nexin 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX20, Length 2,904 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-202ENST00000330943 RBMS1P29558 406 aaKnown RBP13.55□□□□□ -0.24
SNX20-202ENST00000330943 ACSL1P33121 698 aa13.55□□□□□ -0.24
SNX20-202ENST00000330943 HSF2Q03933 536 aa13.55□□□□□ -0.24
SNX20-202ENST00000330943 MPP7Q5T2T1 576 aa13.55□□□□□ -0.24
SNX20-202ENST00000330943 FAM27D1Q5T7N8 215 aa13.55□□□□□ -0.24
SNX20-202ENST00000330943 TRMT11Q7Z4G4 463 aaKnown RBP13.55□□□□□ -0.24
SNX20-202ENST00000330943 TRAPPC5Q8IUR0 188 aa13.55□□□□□ -0.24
SNX20-202ENST00000330943 LRRC56Q8IYG6 542 aaPredicted RBP13.55□□□□□ -0.24
SNX20-202ENST00000330943 BEST4Q8NFU0 473 aa13.55□□□□□ -0.24
SNX20-202ENST00000330943 OR2A12Q8NGT7 310 aa13.55□□□□□ -0.24
SNX20-202ENST00000330943 OR52N1Q8NH53 320 aa13.55□□□□□ -0.24
SNX20-202ENST00000330943 MS4A3Q96HJ5 214 aa13.55□□□□□ -0.24
SNX20-202ENST00000330943 ABHD1Q96SE0 405 aa13.55□□□□□ -0.24
SNX20-202ENST00000330943 KCNN2Q9H2S1 579 aa13.55□□□□□ -0.24
SNX20-202ENST00000330943 DDX31Q9H8H2 851 aaKnown RBP13.55□□□□□ -0.24
SNX20-202ENST00000330943 C12orf4Q9NQ89 552 aa13.55□□□□□ -0.24
SNX20-202ENST00000330943 UBQLN2Q9UHD9 624 aa13.55□□□□□ -0.24
SNX20-202ENST00000330943 CSNK1G3Q9Y6M4 447 aa13.55□□□□□ -0.24
SNX20-202ENST00000330943 PLXNA2O75051 1894 aa13.55□□□□□ -0.24
SNX20-202ENST00000330943 RNF13O43567 381 aa13.55□□□□□ -0.24
SNX20-202ENST00000330943 RB1P06400 928 aa13.55□□□□□ -0.24
SNX20-202ENST00000330943 GIFP27352 417 aa13.55□□□□□ -0.24
SNX20-202ENST00000330943 SHC1P29353 583 aa13.55□□□□□ -0.24
SNX20-202ENST00000330943 MTNR1BP49286 362 aa13.55□□□□□ -0.24
SNX20-202ENST00000330943 CLCNKAP51800 687 aa13.55□□□□□ -0.24
SNX20-202ENST00000330943 PCBP4P57723 403 aaKnown RBP13.55□□□□□ -0.24
SNX20-202ENST00000330943 OR10A3P58181 314 aa13.55□□□□□ -0.24
SNX20-202ENST00000330943 GRK1Q15835 563 aa13.55□□□□□ -0.24
SNX20-202ENST00000330943 PRAMEF14Q5SWL7 426 aa13.55□□□□□ -0.24
SNX20-202ENST00000330943 AADACL4Q5VUY2 407 aa13.55□□□□□ -0.24
SNX20-202ENST00000330943 PRAMEF13Q5VWM6 474 aa13.55□□□□□ -0.24
SNX20-202ENST00000330943 PLEKHM3Q6ZWE6 761 aa13.55□□□□□ -0.24
SNX20-202ENST00000330943 RRM2BQ7LG56 351 aa13.55□□□□□ -0.24
SNX20-202ENST00000330943 OAFQ86UD1 273 aa13.55□□□□□ -0.24
SNX20-202ENST00000330943 LSRQ86X29 649 aaPredicted RBP13.55□□□□□ -0.24
SNX20-202ENST00000330943 OR4Q3Q8NH05 313 aa13.55□□□□□ -0.24
SNX20-202ENST00000330943 CREBZFQ9NS37 354 aa13.55□□□□□ -0.24
SNX20-202ENST00000330943 ZCCHC3Q9NUD5 404 aaKnown RBP13.55□□□□□ -0.24
SNX20-202ENST00000330943 TEX10Q9NXF1 929 aaPredicted RBP13.55□□□□□ -0.24
SNX20-202ENST00000330943 CLEC4AQ9UMR7 237 aa13.55□□□□□ -0.24
SNX20-202ENST00000330943 CPSF4LA6NMK7 179 aaKnown RBP13.54□□□□□ -0.24
SNX20-202ENST00000330943 SOCS6O14544 535 aa13.54□□□□□ -0.24
SNX20-202ENST00000330943 LEFTY1O75610 366 aa13.54□□□□□ -0.24
SNX20-202ENST00000330943 SLC2A10O95528 541 aa13.54□□□□□ -0.24
SNX20-202ENST00000330943 TBX6O95947 436 aaPredicted RBP13.54□□□□□ -0.24
SNX20-202ENST00000330943 CHRM4P08173 479 aa13.54□□□□□ -0.24
SNX20-202ENST00000330943 DNASE1P24855 282 aa13.54□□□□□ -0.24
SNX20-202ENST00000330943 RECQLP46063 649 aaPredicted RBP13.54□□□□□ -0.24
SNX20-202ENST00000330943 EPHA5P54756 1037 aa13.54□□□□□ -0.24
SNX20-202ENST00000330943 ACSM1Q08AH1 577 aa13.54□□□□□ -0.24
SNX20-202ENST00000330943 TSPAN31Q12999 210 aa13.54□□□□□ -0.24
SNX20-202ENST00000330943 CLLU1Q5K131 121 aa13.54□□□□□ -0.24
SNX20-202ENST00000330943 SPOUT1Q5T280 376 aaKnown RBP13.54□□□□□ -0.24
SNX20-202ENST00000330943 KHDRBS2Q5VWX1 349 aaKnown RBP13.54□□□□□ -0.24
SNX20-202ENST00000330943 ASTLQ6HA08 431 aaPredicted RBP13.54□□□□□ -0.24
SNX20-202ENST00000330943 SMARCD3Q6STE5 483 aa13.54□□□□□ -0.24
SNX20-202ENST00000330943 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.54□□□□□ -0.24
SNX20-202ENST00000330943 PIAS4Q8N2W9 510 aaPredicted RBP13.54□□□□□ -0.24
SNX20-202ENST00000330943 CPXM2Q8N436 756 aa13.54□□□□□ -0.24
SNX20-202ENST00000330943 SIRT6Q8N6T7 355 aa13.54□□□□□ -0.24
SNX20-202ENST00000330943 OR51G2Q8NGK0 314 aa13.54□□□□□ -0.24
SNX20-202ENST00000330943 KLK6Q92876 244 aa13.54□□□□□ -0.24
SNX20-202ENST00000330943 OR2M2Q96R28 347 aa13.54□□□□□ -0.24
SNX20-202ENST00000330943 TBX5Q99593 518 aa13.54□□□□□ -0.24
SNX20-202ENST00000330943 MRPL9Q9BYD2 267 aaKnown RBP13.54□□□□□ -0.24
SNX20-202ENST00000330943 TNFRSF10DQ9UBN6 386 aa13.54□□□□□ -0.24
SNX20-202ENST00000330943 NUBP2Q9Y5Y2 271 aa13.54□□□□□ -0.24
SNX20-202ENST00000330943 SIRT4Q9Y6E7 314 aaPredicted RBP13.54□□□□□ -0.24
SNX20-202ENST00000330943 A0A0G2JN53 185 aa13.54□□□□□ -0.24
SNX20-202ENST00000330943 FAM183AA6NL82 134 aa13.54□□□□□ -0.24
SNX20-202ENST00000330943 SURF4O15260 269 aa13.54□□□□□ -0.24
SNX20-202ENST00000330943 OLFM2O95897 454 aa13.54□□□□□ -0.24
SNX20-202ENST00000330943 CD3GP09693 182 aa13.54□□□□□ -0.24
SNX20-202ENST00000330943 BSGP35613 385 aa13.54□□□□□ -0.24
SNX20-202ENST00000330943 RFX3P48380 749 aa13.54□□□□□ -0.24
SNX20-202ENST00000330943 EPHB3P54753 998 aa13.54□□□□□ -0.24
SNX20-202ENST00000330943 LHX8Q68G74 356 aa13.54□□□□□ -0.24
SNX20-202ENST00000330943 FAM83HQ6ZRV2 1179 aaPredicted RBP13.54□□□□□ -0.24
SNX20-202ENST00000330943 KRT78Q8N1N4 520 aa13.54□□□□□ -0.24
SNX20-202ENST00000330943 PTTG3PQ9NZH4 202 aa13.54□□□□□ -0.24
SNX20-202ENST00000330943 LIPT1Q9Y234 373 aa13.54□□□□□ -0.24
SNX20-202ENST00000330943 SCN5AQ14524 2016 aa13.54□□□□□ -0.24
SNX20-202ENST00000330943 TSPAN4O14817 238 aa13.53□□□□□ -0.24
SNX20-202ENST00000330943 GRM6O15303 877 aa13.53□□□□□ -0.24
SNX20-202ENST00000330943 TSPAN9O75954 239 aa13.53□□□□□ -0.24
SNX20-202ENST00000330943 TOXO94900 526 aa13.53□□□□□ -0.24
SNX20-202ENST00000330943 CFDP00746 253 aaPredicted RBP13.53□□□□□ -0.24
SNX20-202ENST00000330943 IGHA1P01876 353 aa13.53□□□□□ -0.24
SNX20-202ENST00000330943 PTNP21246 168 aa13.53□□□□□ -0.24
SNX20-202ENST00000330943 GABRR2P28476 465 aa13.53□□□□□ -0.24
SNX20-202ENST00000330943 IFNGR2P38484 337 aa13.53□□□□□ -0.24
SNX20-202ENST00000330943 CCR6P51684 374 aa13.53□□□□□ -0.24
SNX20-202ENST00000330943 VSX2P58304 361 aaPredicted RBP13.53□□□□□ -0.24
SNX20-202ENST00000330943 FZD5Q13467 585 aa13.53□□□□□ -0.24
SNX20-202ENST00000330943 ARSIQ5FYB1 569 aa13.53□□□□□ -0.24
SNX20-202ENST00000330943 TPGS2Q68CL5 300 aa13.53□□□□□ -0.24
SNX20-202ENST00000330943 RASSF6Q6ZTQ3 369 aa13.53□□□□□ -0.24
SNX20-202ENST00000330943 HTR3DQ70Z44 454 aa13.53□□□□□ -0.24
SNX20-202ENST00000330943 OR8K5Q8NH50 307 aa13.53□□□□□ -0.24
SNX20-202ENST00000330943 PPP1R16AQ96I34 528 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms