RNA–Protein interactions for RNA: ENST00000323668.11

TCOF1-201, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCOF1, Length 4,832 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-201ENST00000323668 PDXPQ96GD0 296 aa13.89□□□□□ -0.19
TCOF1-201ENST00000323668 GAL3ST4Q96RP7 486 aa13.89□□□□□ -0.19
TCOF1-201ENST00000323668 ZIC5Q96T25 663 aa13.89□□□□□ -0.19
TCOF1-201ENST00000323668 THAP7Q9BT49 309 aaPredicted RBP13.89□□□□□ -0.19
TCOF1-201ENST00000323668 TRIM2Q9C040 744 aa13.89□□□□□ -0.19
TCOF1-201ENST00000323668 FXYD6Q9H0Q3 95 aa13.89□□□□□ -0.19
TCOF1-201ENST00000323668 CERS4Q9HA82 394 aa13.89□□□□□ -0.19
TCOF1-201ENST00000323668 MGAT4AQ9UM21 535 aa13.89□□□□□ -0.19
TCOF1-201ENST00000323668 GPX5O75715 221 aa13.89□□□□□ -0.19
TCOF1-201ENST00000323668 ADH1BP00325 375 aa13.89□□□□□ -0.19
TCOF1-201ENST00000323668 HTR1AP08908 422 aa13.89□□□□□ -0.19
TCOF1-201ENST00000323668 PSMB5P28074 263 aa13.89□□□□□ -0.19
TCOF1-201ENST00000323668 GDI1P31150 447 aa13.89□□□□□ -0.19
TCOF1-201ENST00000323668 CSRP3P50461 194 aa13.89□□□□□ -0.19
TCOF1-201ENST00000323668 RPS21P63220 83 aaKnown RBP13.89□□□□□ -0.19
TCOF1-201ENST00000323668 CAMK1Q14012 370 aa13.89□□□□□ -0.19
TCOF1-201ENST00000323668 METAP1DQ6UB28 335 aaPredicted RBP13.89□□□□□ -0.19
TCOF1-201ENST00000323668 BAIAP2L2Q6UXY1 529 aa13.89□□□□□ -0.19
TCOF1-201ENST00000323668 ZNF550Q7Z398 422 aa13.89□□□□□ -0.19
TCOF1-201ENST00000323668 OR2M4Q96R27 311 aa13.89□□□□□ -0.19
TCOF1-201ENST00000323668 MACROD1Q9BQ69 325 aa13.89□□□□□ -0.19
TCOF1-201ENST00000323668 A4GALTQ9NPC4 353 aa13.89□□□□□ -0.19
TCOF1-201ENST00000323668 RBFOX1Q9NWB1 397 aaKnown RBP13.89□□□□□ -0.19
TCOF1-201ENST00000323668 SLC7A7Q9UM01 511 aa13.89□□□□□ -0.19
TCOF1-201ENST00000323668 SLC5A10A0PJK1 596 aa13.89□□□□□ -0.19
TCOF1-201ENST00000323668 GXYLT2A0PJZ3 443 aa13.89□□□□□ -0.19
TCOF1-201ENST00000323668 TMEM221A6NGB7 291 aa13.89□□□□□ -0.19
TCOF1-201ENST00000323668 ZSCAN5BA6NJL1 495 aa13.89□□□□□ -0.19
TCOF1-201ENST00000323668 TGM1P22735 817 aa13.89□□□□□ -0.19
TCOF1-201ENST00000323668 CERS1P27544 350 aa13.89□□□□□ -0.19
TCOF1-201ENST00000323668 MAP3K8P41279 467 aa13.89□□□□□ -0.19
TCOF1-201ENST00000323668 AP2S1P53680 142 aaPredicted RBP13.89□□□□□ -0.19
TCOF1-201ENST00000323668 FBXO15Q8NCQ5 510 aaPredicted RBP13.89□□□□□ -0.19
TCOF1-201ENST00000323668 OR2L5Q8NG80 312 aa13.89□□□□□ -0.19
TCOF1-201ENST00000323668 ZNF582Q96NG8 517 aaPredicted RBP13.89□□□□□ -0.19
TCOF1-201ENST00000323668 DPCDQ9BVM2 203 aaPredicted RBP13.89□□□□□ -0.19
TCOF1-201ENST00000323668 FAM183AA6NL82 134 aa13.88□□□□□ -0.19
TCOF1-201ENST00000323668 PIPP12273 146 aaPredicted RBP13.88□□□□□ -0.19
TCOF1-201ENST00000323668 HIST1H1TP22492 207 aaPredicted RBP13.88□□□□□ -0.19
TCOF1-201ENST00000323668 AKT2P31751 481 aa13.88□□□□□ -0.19
TCOF1-201ENST00000323668 SOX2P48431 317 aa13.88□□□□□ -0.19
TCOF1-201ENST00000323668 RPS25P62851 125 aaKnown RBP13.88□□□□□ -0.19
TCOF1-201ENST00000323668 EIF4EBP2Q13542 120 aaPredicted RBP13.88□□□□□ -0.19
TCOF1-201ENST00000323668 ZNF385BQ569K4 471 aa13.88□□□□□ -0.19
TCOF1-201ENST00000323668 PIP5KL1Q5T9C9 394 aa13.88□□□□□ -0.19
TCOF1-201ENST00000323668 CCDC107Q8WV48 283 aa13.88□□□□□ -0.19
TCOF1-201ENST00000323668 C5orf34Q96MH7 638 aa13.88□□□□□ -0.19
TCOF1-201ENST00000323668 C11orf54Q9H0W9 315 aaPredicted RBP13.88□□□□□ -0.19
TCOF1-201ENST00000323668 BABAM2Q9NXR7 383 aa13.88□□□□□ -0.19
TCOF1-201ENST00000323668 ZNF226Q9NYT6 803 aa13.88□□□□□ -0.19
TCOF1-201ENST00000323668 UBQLN2Q9UHD9 624 aa13.88□□□□□ -0.19
TCOF1-201ENST00000323668 PPIEQ9UNP9 301 aaKnown RBP13.88□□□□□ -0.19
TCOF1-201ENST00000323668 PCDHGA4Q9Y5G9 962 aa13.88□□□□□ -0.19
TCOF1-201ENST00000323668 ZAR1LA6NP61 321 aa13.88□□□□□ -0.19
TCOF1-201ENST00000323668 CLEC2LP0C7M8 214 aa13.88□□□□□ -0.19
TCOF1-201ENST00000323668 AHRP35869 848 aa13.88□□□□□ -0.19
TCOF1-201ENST00000323668 TM4SF4P48230 202 aa13.88□□□□□ -0.19
TCOF1-201ENST00000323668 RPS15AP62244 130 aaKnown RBP13.88□□□□□ -0.19
TCOF1-201ENST00000323668 CRYZQ08257 329 aaKnown RBP13.88□□□□□ -0.19
TCOF1-201ENST00000323668 SLC22A10Q63ZE4 541 aa13.88□□□□□ -0.19
TCOF1-201ENST00000323668 ARHGAP11AQ6P4F7 1023 aa13.88□□□□□ -0.19
TCOF1-201ENST00000323668 GPR135Q8IZ08 494 aa13.88□□□□□ -0.19
TCOF1-201ENST00000323668 SIMC1Q8NDZ2 872 aa13.88□□□□□ -0.19
TCOF1-201ENST00000323668 SLC7A13Q8TCU3 470 aa13.88□□□□□ -0.19
TCOF1-201ENST00000323668 EPHX3Q9H6B9 360 aa13.88□□□□□ -0.19
TCOF1-201ENST00000323668 C1GALT1Q9NS00 363 aa13.88□□□□□ -0.19
TCOF1-201ENST00000323668 ACTA2P62736 377 aa13.88□□□□□ -0.19
TCOF1-201ENST00000323668 ACTG2P63267 376 aa13.88□□□□□ -0.19
TCOF1-201ENST00000323668 PRDX1Q06830 199 aaKnown RBP13.88□□□□□ -0.19
TCOF1-201ENST00000323668 FGFBP1Q14512 234 aa13.88□□□□□ -0.19
TCOF1-201ENST00000323668 PGGHGQ32M88 737 aa13.88□□□□□ -0.19
TCOF1-201ENST00000323668 CCDC157Q569K6 752 aa13.88□□□□□ -0.19
TCOF1-201ENST00000323668 PRRT3Q5FWE3 981 aa13.88□□□□□ -0.19
TCOF1-201ENST00000323668 HENMT1Q5T8I9 393 aaKnown RBP13.88□□□□□ -0.19
TCOF1-201ENST00000323668 OLFML2AQ68BL7 652 aa13.88□□□□□ -0.19
TCOF1-201ENST00000323668 PGBD2Q6P3X8 592 aa13.88□□□□□ -0.19
TCOF1-201ENST00000323668 CYB561A3Q8NBI2 242 aa13.88□□□□□ -0.19
TCOF1-201ENST00000323668 OR5W2Q8NH69 310 aa13.88□□□□□ -0.19
TCOF1-201ENST00000323668 DNAJA4Q8WW22 397 aaPredicted RBP13.88□□□□□ -0.19
TCOF1-201ENST00000323668 DGAT2Q96PD7 388 aa13.88□□□□□ -0.19
TCOF1-201ENST00000323668 NT5DC2Q9H857 520 aa13.88□□□□□ -0.19
TCOF1-201ENST00000323668 ADAM29Q9UKF5 820 aa13.88□□□□□ -0.19
TCOF1-201ENST00000323668 TRIM3O75382 744 aaPredicted RBP13.88□□□□□ -0.19
TCOF1-201ENST00000323668 AK1P00568 194 aa13.88□□□□□ -0.19
TCOF1-201ENST00000323668 PCMT1P22061 227 aa13.88□□□□□ -0.19
TCOF1-201ENST00000323668 HOXC8P31273 242 aa13.88□□□□□ -0.19
TCOF1-201ENST00000323668 MMP12P39900 470 aa13.88□□□□□ -0.19
TCOF1-201ENST00000323668 SLC1A3P43003 542 aa13.88□□□□□ -0.19
TCOF1-201ENST00000323668 RNF165Q6ZSG1 346 aa13.88□□□□□ -0.19
TCOF1-201ENST00000323668 PHC2Q8IXK0 858 aa13.88□□□□□ -0.19
TCOF1-201ENST00000323668 OR52I1Q8NGK6 324 aa13.88□□□□□ -0.19
TCOF1-201ENST00000323668 DPF3Q92784 378 aa13.88□□□□□ -0.19
TCOF1-201ENST00000323668 MS4A4EQ96PG1 132 aa13.88□□□□□ -0.19
TCOF1-201ENST00000323668 SIRT5Q9NXA8 310 aa13.88□□□□□ -0.19
TCOF1-201ENST00000323668 CCL26Q9Y258 94 aa13.88□□□□□ -0.19
TCOF1-201ENST00000323668 A0A1W2PQU0 124 aa13.87□□□□□ -0.19
TCOF1-201ENST00000323668 ETHE1O95571 254 aa13.87□□□□□ -0.19
TCOF1-201ENST00000323668 DRD5P21918 477 aa13.87□□□□□ -0.19
TCOF1-201ENST00000323668 SELENBP1Q13228 472 aa13.87□□□□□ -0.19
TCOF1-201ENST00000323668 LRRC56Q8IYG6 542 aaPredicted RBP13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms