RNA–Protein interactions for RNA: ENST00000317677.9

CPNE1-201, Transcript of copine 1, humanhuman

TSL 1 (best) BASIC

Gene CPNE1, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-201ENST00000317677 RAB8AP61006 207 aa12.25□□□□□ -0.45
CPNE1-201ENST00000317677 EEF1A2Q05639 463 aaKnown RBP12.25□□□□□ -0.45
CPNE1-201ENST00000317677 DUSP2Q05923 314 aa12.25□□□□□ -0.45
CPNE1-201ENST00000317677 RGS1Q08116 209 aa12.25□□□□□ -0.45
CPNE1-201ENST00000317677 COL9A2Q14055 689 aaPredicted RBP12.25□□□□□ -0.45
CPNE1-201ENST00000317677 GNA13Q14344 377 aa12.25□□□□□ -0.45
CPNE1-201ENST00000317677 KIR2DS3Q14952 304 aa12.25□□□□□ -0.45
CPNE1-201ENST00000317677 MLIPQ5VWP3 458 aa12.25□□□□□ -0.45
CPNE1-201ENST00000317677 ANKRD34AQ69YU3 496 aa12.25□□□□□ -0.45
CPNE1-201ENST00000317677 LAIR1Q6GTX8 287 aa12.25□□□□□ -0.45
CPNE1-201ENST00000317677 ERICH5Q6P6B1 374 aa12.25□□□□□ -0.45
CPNE1-201ENST00000317677 TAF8Q7Z7C8 310 aa12.25□□□□□ -0.45
CPNE1-201ENST00000317677 TMEM179BQ7Z7N9 219 aa12.25□□□□□ -0.45
CPNE1-201ENST00000317677 KCT2Q8NC54 265 aa12.25□□□□□ -0.45
CPNE1-201ENST00000317677 OR2L5Q8NG80 312 aa12.25□□□□□ -0.45
CPNE1-201ENST00000317677 ASB15Q8WXK1 588 aa12.25□□□□□ -0.45
CPNE1-201ENST00000317677 EXOSC8Q96B26 276 aaKnown RBP12.25□□□□□ -0.45
CPNE1-201ENST00000317677 ZNF764Q96H86 408 aaPredicted RBP12.25□□□□□ -0.45
CPNE1-201ENST00000317677 WDFY2Q96P53 400 aa12.25□□□□□ -0.45
CPNE1-201ENST00000317677 QRFPRQ96P65 431 aa12.25□□□□□ -0.45
CPNE1-201ENST00000317677 TRNT1Q96Q11 434 aaKnown RBP12.25□□□□□ -0.45
CPNE1-201ENST00000317677 DCLRE1CQ96SD1 692 aaKnown RBP12.25□□□□□ -0.45
CPNE1-201ENST00000317677 GABARAPL1Q9H0R8 117 aa12.25□□□□□ -0.45
CPNE1-201ENST00000317677 MAGIXQ9H6Y5 334 aa12.25□□□□□ -0.45
CPNE1-201ENST00000317677 C1GALT1Q9NS00 363 aa12.25□□□□□ -0.45
CPNE1-201ENST00000317677 POT1Q9NUX5 634 aa12.25□□□□□ -0.45
CPNE1-201ENST00000317677 ERVK13-1Q9NX77 482 aa12.25□□□□□ -0.45
CPNE1-201ENST00000317677 PILRAQ9UKJ1 303 aa12.25□□□□□ -0.45
CPNE1-201ENST00000317677 CACNA1IQ9P0X4 2223 aa12.24□□□□□ -0.45
CPNE1-201ENST00000317677 A0A1W2PR48 441 aa12.24□□□□□ -0.45
CPNE1-201ENST00000317677 VIPP01282 170 aa12.24□□□□□ -0.45
CPNE1-201ENST00000317677 PVRP15151 417 aa12.24□□□□□ -0.45
CPNE1-201ENST00000317677 HIST1H1TP22492 207 aaPredicted RBP12.24□□□□□ -0.45
CPNE1-201ENST00000317677 PCGF2P35227 344 aa12.24□□□□□ -0.45
CPNE1-201ENST00000317677 MAGEA2P43356 314 aa12.24□□□□□ -0.45
CPNE1-201ENST00000317677 RAB25P57735 213 aa12.24□□□□□ -0.45
CPNE1-201ENST00000317677 TRA2BP62995 288 aaKnown RBP12.24□□□□□ -0.45
CPNE1-201ENST00000317677 PPP1R8Q12972 351 aaKnown RBP12.24□□□□□ -0.45
CPNE1-201ENST00000317677 VEZF1Q14119 521 aa12.24□□□□□ -0.45
CPNE1-201ENST00000317677 IRF3Q14653 427 aa12.24□□□□□ -0.45
CPNE1-201ENST00000317677 HEPACAMQ14CZ8 416 aa12.24□□□□□ -0.45
CPNE1-201ENST00000317677 FAM214AQ32MH5 1076 aa12.24□□□□□ -0.45
CPNE1-201ENST00000317677 PROX2Q3B8N5 592 aa12.24□□□□□ -0.45
CPNE1-201ENST00000317677 KDM4DQ6B0I6 523 aa12.24□□□□□ -0.45
CPNE1-201ENST00000317677 CBLL1Q75N03 491 aa12.24□□□□□ -0.45
CPNE1-201ENST00000317677 VTCN1Q7Z7D3 282 aa12.24□□□□□ -0.45
CPNE1-201ENST00000317677 PARGQ86W56 976 aa12.24□□□□□ -0.45
CPNE1-201ENST00000317677 RNF130Q86XS8 419 aa12.24□□□□□ -0.45
CPNE1-201ENST00000317677 ADGRG3Q86Y34 549 aa12.24□□□□□ -0.45
CPNE1-201ENST00000317677 TRIM48Q8IWZ4 208 aa12.24□□□□□ -0.45
CPNE1-201ENST00000317677 HS3ST5Q8IZT8 346 aa12.24□□□□□ -0.45
CPNE1-201ENST00000317677 ACOT4Q8N9L9 421 aa12.24□□□□□ -0.45
CPNE1-201ENST00000317677 FAM181AQ8N9Y4 354 aa12.24□□□□□ -0.45
CPNE1-201ENST00000317677 HYLS1Q96M11 299 aa12.24□□□□□ -0.45
CPNE1-201ENST00000317677 GPR137Q96N19 417 aa12.24□□□□□ -0.45
CPNE1-201ENST00000317677 OR2A5Q96R48 311 aa12.24□□□□□ -0.45
CPNE1-201ENST00000317677 SPATA9Q9BWV2 254 aa12.24□□□□□ -0.45
CPNE1-201ENST00000317677 FAM86C1Q9NVL1 165 aa12.24□□□□□ -0.45
CPNE1-201ENST00000317677 ING3Q9NXR8 418 aa12.24□□□□□ -0.45
CPNE1-201ENST00000317677 SLC23A1Q9UHI7 598 aa12.24□□□□□ -0.45
CPNE1-201ENST00000317677 ATG4BQ9Y4P1 393 aa12.24□□□□□ -0.45
CPNE1-201ENST00000317677 A0A1W2PS29 197 aa12.23□□□□□ -0.45
CPNE1-201ENST00000317677 GSAPA4D1B5 854 aa12.23□□□□□ -0.45
CPNE1-201ENST00000317677 I3L521 148 aa12.23□□□□□ -0.45
CPNE1-201ENST00000317677 FAM20BO75063 409 aa12.23□□□□□ -0.45
CPNE1-201ENST00000317677 PDE9AO76083 593 aa12.23□□□□□ -0.45
CPNE1-201ENST00000317677 ZNF682O95780 498 aa12.23□□□□□ -0.45
CPNE1-201ENST00000317677 CCNYL3P0C7X3 344 aa12.23□□□□□ -0.45
CPNE1-201ENST00000317677 ZNF250P15622 560 aa12.23□□□□□ -0.45
CPNE1-201ENST00000317677 ALAS2P22557 587 aa12.23□□□□□ -0.45
CPNE1-201ENST00000317677 CD27P26842 260 aa12.23□□□□□ -0.45
CPNE1-201ENST00000317677 PTGER1P34995 402 aa12.23□□□□□ -0.45
CPNE1-201ENST00000317677 SOAT1P35610 550 aa12.23□□□□□ -0.45
CPNE1-201ENST00000317677 CRATP43155 626 aa12.23□□□□□ -0.45
CPNE1-201ENST00000317677 MAD2L1BPQ15013 274 aaPredicted RBP12.23□□□□□ -0.45
CPNE1-201ENST00000317677 IQCCQ4KMZ1 466 aa12.23□□□□□ -0.45
CPNE1-201ENST00000317677 SLC35F1Q5T1Q4 408 aa12.23□□□□□ -0.45
CPNE1-201ENST00000317677 FIGLAQ6QHK4 219 aa12.23□□□□□ -0.45
CPNE1-201ENST00000317677 SPESP1Q6UW49 350 aa12.23□□□□□ -0.45
CPNE1-201ENST00000317677 CDH24Q86UP0 819 aa12.23□□□□□ -0.45
CPNE1-201ENST00000317677 SHISA5Q8N114 240 aa12.23□□□□□ -0.45
CPNE1-201ENST00000317677 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.23□□□□□ -0.45
CPNE1-201ENST00000317677 ZFPM2Q8WW38 1151 aa12.23□□□□□ -0.45
CPNE1-201ENST00000317677 OR5P2Q8WZ92 322 aa12.23□□□□□ -0.45
CPNE1-201ENST00000317677 TM4SF19Q96DZ7 209 aa12.23□□□□□ -0.45
CPNE1-201ENST00000317677 PLCXD1Q9NUJ7 323 aa12.23□□□□□ -0.45
CPNE1-201ENST00000317677 TMEM74BQ9NUR3 256 aa12.23□□□□□ -0.45
CPNE1-201ENST00000317677 EXD2Q9NVH0 621 aa12.23□□□□□ -0.45
CPNE1-201ENST00000317677 NDRG4Q9ULP0 352 aaKnown RBP12.23□□□□□ -0.45
CPNE1-201ENST00000317677 ABCG2Q9UNQ0 655 aa12.23□□□□□ -0.45
CPNE1-201ENST00000317677 MAP4K5Q9Y4K4 846 aa12.23□□□□□ -0.45
CPNE1-201ENST00000317677 WDFY4Q6ZS81 3184 aa12.23□□□□□ -0.45
CPNE1-201ENST00000317677 GLOD5A6NK44 160 aa12.23□□□□□ -0.45
CPNE1-201ENST00000317677 H0YC42 278 aa12.23□□□□□ -0.45
CPNE1-201ENST00000317677 GNGT2O14610 69 aa12.23□□□□□ -0.45
CPNE1-201ENST00000317677 TFECO14948 347 aaPredicted RBP12.23□□□□□ -0.45
CPNE1-201ENST00000317677 PGRMC2O15173 223 aa12.23□□□□□ -0.45
CPNE1-201ENST00000317677 DNAJB6O75190 326 aa12.23□□□□□ -0.45
CPNE1-201ENST00000317677 WDPCPO95876 746 aa12.23□□□□□ -0.45
CPNE1-201ENST00000317677 HMGN1P05114 100 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms