RNA–Protein interactions for RNA: ENST00000317610.11

RTN4-201, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,333 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-201ENST00000317610 GPSM3Q9Y4H4 160 aa17.89■□□□□ 0.46
RTN4-201ENST00000317610 HEATR5BQ9P2D3 2071 aa17.89■□□□□ 0.45
RTN4-201ENST00000317610 GTPBP1O00178 669 aaKnown RBP17.89■□□□□ 0.45
RTN4-201ENST00000317610 PPM1DO15297 605 aa17.89■□□□□ 0.45
RTN4-201ENST00000317610 HRO43593 1189 aa17.89■□□□□ 0.45
RTN4-201ENST00000317610 RGS9O75916 674 aaPredicted RBP17.89■□□□□ 0.45
RTN4-201ENST00000317610 NTN1O95631 604 aa17.89■□□□□ 0.45
RTN4-201ENST00000317610 NUDT1P36639 197 aa17.89■□□□□ 0.45
RTN4-201ENST00000317610 SSR2P43308 183 aa17.89■□□□□ 0.45
RTN4-201ENST00000317610 ARFIP1P53367 373 aa17.89■□□□□ 0.45
RTN4-201ENST00000317610 CSNK1G2P78368 415 aa17.89■□□□□ 0.45
RTN4-201ENST00000317610 DECR1Q16698 335 aa17.89■□□□□ 0.45
RTN4-201ENST00000317610 KIAA1161Q6NSJ0 714 aa17.89■□□□□ 0.45
RTN4-201ENST00000317610 TMEM107Q6UX40 140 aa17.89■□□□□ 0.45
RTN4-201ENST00000317610 C11orf74Q86VG3 221 aa17.89■□□□□ 0.45
RTN4-201ENST00000317610 OR4M2Q8NGB6 313 aa17.89■□□□□ 0.45
RTN4-201ENST00000317610 OR56A1Q8NGH5 318 aa17.89■□□□□ 0.45
RTN4-201ENST00000317610 OR5M3Q8NGP4 307 aa17.89■□□□□ 0.45
RTN4-201ENST00000317610 MOAP1Q96BY2 351 aa17.89■□□□□ 0.45
RTN4-201ENST00000317610 CITED4Q96RK1 184 aa17.89■□□□□ 0.45
RTN4-201ENST00000317610 BBS4Q96RK4 519 aa17.89■□□□□ 0.45
RTN4-201ENST00000317610 SECISBP2Q96T21 854 aaKnown RBP17.89■□□□□ 0.45
RTN4-201ENST00000317610 SLC38A1Q9H2H9 487 aa17.89■□□□□ 0.45
RTN4-201ENST00000317610 MRPL39Q9NYK5 338 aaKnown RBP17.89■□□□□ 0.45
RTN4-201ENST00000317610 STMN3Q9NZ72 180 aa17.89■□□□□ 0.45
RTN4-201ENST00000317610 SLC23A2Q9UGH3 650 aa17.89■□□□□ 0.45
RTN4-201ENST00000317610 PRKAG2Q9UGJ0 569 aa17.89■□□□□ 0.45
RTN4-201ENST00000317610 ZBTB32Q9Y2Y4 487 aaPredicted RBP17.89■□□□□ 0.45
RTN4-201ENST00000317610 CHST2Q9Y4C5 530 aa17.89■□□□□ 0.45
RTN4-201ENST00000317610 KCNE3Q9Y6H6 103 aa17.89■□□□□ 0.45
RTN4-201ENST00000317610 LTBP2Q14767 1821 aa17.89■□□□□ 0.45
RTN4-201ENST00000317610 A0A0G2JN53 185 aa17.88■□□□□ 0.45
RTN4-201ENST00000317610 CPSF4LA6NMK7 179 aaKnown RBP17.88■□□□□ 0.45
RTN4-201ENST00000317610 C12orf71A8MTZ7 269 aa17.88■□□□□ 0.45
RTN4-201ENST00000317610 LZTS3O60299 673 aaPredicted RBP17.88■□□□□ 0.45
RTN4-201ENST00000317610 NFATC1O95644 943 aa17.88■□□□□ 0.45
RTN4-201ENST00000317610 CH25HO95992 272 aa17.88■□□□□ 0.45
RTN4-201ENST00000317610 WEE1P30291 646 aa17.88■□□□□ 0.45
RTN4-201ENST00000317610 PPM1AP35813 382 aa17.88■□□□□ 0.45
RTN4-201ENST00000317610 RNF144AP50876 292 aaPredicted RBP17.88■□□□□ 0.45
RTN4-201ENST00000317610 CSTF1Q05048 431 aaKnown RBP17.88■□□□□ 0.45
RTN4-201ENST00000317610 HBMQ6B0K9 141 aa17.88■□□□□ 0.45
RTN4-201ENST00000317610 RFPL4BQ6ZWI9 263 aa17.88■□□□□ 0.45
RTN4-201ENST00000317610 LRRC28Q86X40 367 aaPredicted RBP17.88■□□□□ 0.45
RTN4-201ENST00000317610 KLBQ86Z14 1044 aa17.88■□□□□ 0.45
RTN4-201ENST00000317610 BBS1Q8NFJ9 593 aa17.88■□□□□ 0.45
RTN4-201ENST00000317610 ACOT11Q8WXI4 607 aaPredicted RBP17.88■□□□□ 0.45
RTN4-201ENST00000317610 OTUB2Q96DC9 234 aa17.88■□□□□ 0.45
RTN4-201ENST00000317610 COX14Q96I36 57 aa17.88■□□□□ 0.45
RTN4-201ENST00000317610 C17orf62Q9BQA9 187 aa17.88■□□□□ 0.45
RTN4-201ENST00000317610 POLMQ9NP87 494 aaPredicted RBP17.88■□□□□ 0.45
RTN4-201ENST00000317610 LRIT2A6NDA9 550 aa17.88■□□□□ 0.45
RTN4-201ENST00000317610 RNF13O43567 381 aa17.88■□□□□ 0.45
RTN4-201ENST00000317610 PRKRAO75569 313 aaKnown RBP17.88■□□□□ 0.45
RTN4-201ENST00000317610 TRHRP34981 398 aaPredicted RBP17.88■□□□□ 0.45
RTN4-201ENST00000317610 SMARCD3Q6STE5 483 aa17.88■□□□□ 0.45
RTN4-201ENST00000317610 ZNF782Q6ZMW2 699 aaPredicted RBP17.88■□□□□ 0.45
RTN4-201ENST00000317610 ZNF620Q6ZNG0 422 aa17.88■□□□□ 0.45
RTN4-201ENST00000317610 C16orf58Q96GQ5 468 aa17.88■□□□□ 0.45
RTN4-201ENST00000317610 KCNN2Q9H2S1 579 aa17.88■□□□□ 0.45
RTN4-201ENST00000317610 B3GNT2Q9NY97 397 aa17.88■□□□□ 0.45
RTN4-201ENST00000317610 TNFRSF10DQ9UBN6 386 aa17.88■□□□□ 0.45
RTN4-201ENST00000317610 DNMT3AQ9Y6K1 912 aaPredicted RBP17.88■□□□□ 0.45
RTN4-201ENST00000317610 DVL2O14641 736 aa17.87■□□□□ 0.45
RTN4-201ENST00000317610 FRS3O43559 492 aa17.87■□□□□ 0.45
RTN4-201ENST00000317610 RFX3P48380 749 aa17.87■□□□□ 0.45
RTN4-201ENST00000317610 ANGPT1Q15389 498 aa17.87■□□□□ 0.45
RTN4-201ENST00000317610 TMEM35AQ53FP2 167 aa17.87■□□□□ 0.45
RTN4-201ENST00000317610 PIP5KL1Q5T9C9 394 aa17.87■□□□□ 0.45
RTN4-201ENST00000317610 RRM2BQ7LG56 351 aa17.87■□□□□ 0.45
RTN4-201ENST00000317610 VRK2Q86Y07 508 aa17.87■□□□□ 0.45
RTN4-201ENST00000317610 TMIEQ8NEW7 156 aa17.87■□□□□ 0.45
RTN4-201ENST00000317610 KCTD12Q96CX2 325 aaKnown RBP17.87■□□□□ 0.45
RTN4-201ENST00000317610 HDHD2Q9H0R4 259 aa17.87■□□□□ 0.45
RTN4-201ENST00000317610 PIGUQ9H490 435 aa17.87■□□□□ 0.45
RTN4-201ENST00000317610 SLC23A1Q9UHI7 598 aa17.87■□□□□ 0.45
RTN4-201ENST00000317610 CHP2O43745 196 aa17.87■□□□□ 0.45
RTN4-201ENST00000317610 ICMTO60725 284 aa17.87■□□□□ 0.45
RTN4-201ENST00000317610 PTGER1P34995 402 aa17.87■□□□□ 0.45
RTN4-201ENST00000317610 ST8SIA6P61647 398 aa17.87■□□□□ 0.45
RTN4-201ENST00000317610 DEFB103AP81534 67 aa17.87■□□□□ 0.45
RTN4-201ENST00000317610 DUSP2Q05923 314 aa17.87■□□□□ 0.45
RTN4-201ENST00000317610 LRRC32Q14392 662 aa17.87■□□□□ 0.45
RTN4-201ENST00000317610 TMEM52BQ4KMG9 183 aa17.87■□□□□ 0.45
RTN4-201ENST00000317610 ZNF697Q5TEC3 545 aa17.87■□□□□ 0.45
RTN4-201ENST00000317610 METRNLQ641Q3 311 aa17.87■□□□□ 0.45
RTN4-201ENST00000317610 ERN2Q76MJ5 926 aaKnown RBP17.87■□□□□ 0.45
RTN4-201ENST00000317610 NKAIN4Q8IVV8 208 aa17.87■□□□□ 0.45
RTN4-201ENST00000317610 SIRT6Q8N6T7 355 aa17.87■□□□□ 0.45
RTN4-201ENST00000317610 WFIKKN2Q8TEU8 576 aa17.87■□□□□ 0.45
RTN4-201ENST00000317610 KLK6Q92876 244 aa17.87■□□□□ 0.45
RTN4-201ENST00000317610 CNRIP1Q96F85 164 aaPredicted RBP17.87■□□□□ 0.45
RTN4-201ENST00000317610 OR7D2Q96RA2 312 aa17.87■□□□□ 0.45
RTN4-201ENST00000317610 SLC13A4Q9UKG4 626 aa17.87■□□□□ 0.45
RTN4-201ENST00000317610 ABT1Q9ULW3 272 aaKnown RBP17.87■□□□□ 0.45
RTN4-201ENST00000317610 C7orf66A4D0T2 115 aa17.86■□□□□ 0.45
RTN4-201ENST00000317610 FGF19O95750 216 aa17.86■□□□□ 0.45
RTN4-201ENST00000317610 PAHP00439 452 aa17.86■□□□□ 0.45
RTN4-201ENST00000317610 HMGN1P05114 100 aa17.86■□□□□ 0.45
RTN4-201ENST00000317610 TFPIP10646 304 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms