RNA–Protein interactions for RNA: ENST00000316433.8

ZNF540-201, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ZNF540, Length 3,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-201ENST00000316433 FAM212BQ9NTI7 297 aaPredicted RBP6.27□□□□□ -1.41
ZNF540-201ENST00000316433 VNN3Q9NY84 501 aa6.27□□□□□ -1.41
ZNF540-201ENST00000316433 GIMAP2Q9UG22 337 aa6.27□□□□□ -1.41
ZNF540-201ENST00000316433 ZMYM5Q9UJ78 669 aa6.27□□□□□ -1.41
ZNF540-201ENST00000316433 SAMD4AQ9UPU9 718 aaKnown RBP6.27□□□□□ -1.41
ZNF540-201ENST00000316433 LTBP2Q14767 1821 aa6.27□□□□□ -1.41
ZNF540-201ENST00000316433 KCNE1BA0A087WTH5 132 aa6.27□□□□□ -1.41
ZNF540-201ENST00000316433 A0A1W2PPE3 182 aa6.27□□□□□ -1.41
ZNF540-201ENST00000316433 OR2W5A6NFC9 320 aa6.27□□□□□ -1.41
ZNF540-201ENST00000316433 KDM4EB2RXH2 506 aaPredicted RBP6.27□□□□□ -1.41
ZNF540-201ENST00000316433 SSNA1O43805 119 aa6.27□□□□□ -1.41
ZNF540-201ENST00000316433 PRAMEF2O60811 474 aa6.27□□□□□ -1.41
ZNF540-201ENST00000316433 SCN2BO60939 215 aa6.27□□□□□ -1.41
ZNF540-201ENST00000316433 GJB1P08034 283 aa6.27□□□□□ -1.41
ZNF540-201ENST00000316433 ZNF865P0CJ78 1059 aaPredicted RBP6.27□□□□□ -1.41
ZNF540-201ENST00000316433 OR8G3PP0DMU2 310 aa6.27□□□□□ -1.41
ZNF540-201ENST00000316433 MST1P26927 711 aa6.27□□□□□ -1.41
ZNF540-201ENST00000316433 MPIP34949 423 aa6.27□□□□□ -1.41
ZNF540-201ENST00000316433 ZP1P60852 638 aa6.27□□□□□ -1.41
ZNF540-201ENST00000316433 FAM189BP81408 668 aa6.27□□□□□ -1.41
ZNF540-201ENST00000316433 E2F1Q01094 437 aa6.27□□□□□ -1.41
ZNF540-201ENST00000316433 CSHL1Q14406 222 aa6.27□□□□□ -1.41
ZNF540-201ENST00000316433 C3orf38Q5JPI3 329 aa6.27□□□□□ -1.41
ZNF540-201ENST00000316433 PYY3Q5JQD4 70 aa6.27□□□□□ -1.41
ZNF540-201ENST00000316433 ZDHHC20Q5W0Z9 365 aa6.27□□□□□ -1.41
ZNF540-201ENST00000316433 FAM219BQ5XKK7 198 aa6.27□□□□□ -1.41
ZNF540-201ENST00000316433 BAIAP2L2Q6UXY1 529 aa6.27□□□□□ -1.41
ZNF540-201ENST00000316433 SPNS3Q6ZMD2 512 aa6.27□□□□□ -1.41
ZNF540-201ENST00000316433 Q6ZSR9 355 aa6.27□□□□□ -1.41
ZNF540-201ENST00000316433 SLC29A4Q7RTT9 530 aa6.27□□□□□ -1.41
ZNF540-201ENST00000316433 FGD2Q7Z6J4 655 aa6.27□□□□□ -1.41
ZNF540-201ENST00000316433 LRRTM4Q86VH4 590 aa6.27□□□□□ -1.41
ZNF540-201ENST00000316433 LRRC18Q8N456 261 aa6.27□□□□□ -1.41
ZNF540-201ENST00000316433 FBXO39Q8N4B4 442 aa6.27□□□□□ -1.41
ZNF540-201ENST00000316433 SPPL3Q8TCT6 385 aa6.27□□□□□ -1.41
ZNF540-201ENST00000316433 LRRN4Q8WUT4 740 aa6.27□□□□□ -1.41
ZNF540-201ENST00000316433 AP3S1Q92572 193 aa6.27□□□□□ -1.41
ZNF540-201ENST00000316433 MYOCQ99972 504 aa6.27□□□□□ -1.41
ZNF540-201ENST00000316433 SLC25A32Q9H2D1 315 aa6.27□□□□□ -1.41
ZNF540-201ENST00000316433 SIRT7Q9NRC8 400 aa6.27□□□□□ -1.41
ZNF540-201ENST00000316433 THSD1Q9NS62 852 aa6.27□□□□□ -1.41
ZNF540-201ENST00000316433 TMEM30AQ9NV96 361 aa6.27□□□□□ -1.41
ZNF540-201ENST00000316433 RBM22Q9NW64 420 aaKnown RBP eCLIP6.27□□□□□ -1.41
ZNF540-201ENST00000316433 TAS2R16Q9NYV7 291 aa6.27□□□□□ -1.41
ZNF540-201ENST00000316433 IGLV3-16A0A075B6K0 115 aa6.26□□□□□ -1.41
ZNF540-201ENST00000316433 FOXE1O00358 373 aaPredicted RBP6.26□□□□□ -1.41
ZNF540-201ENST00000316433 KDELR3O43731 214 aa6.26□□□□□ -1.41
ZNF540-201ENST00000316433 CIDEAO60543 219 aa6.26□□□□□ -1.41
ZNF540-201ENST00000316433 ECI2O75521 394 aa6.26□□□□□ -1.41
ZNF540-201ENST00000316433 AP2A2O94973 939 aa6.26□□□□□ -1.41
ZNF540-201ENST00000316433 SIX3O95343 332 aaPredicted RBP6.26□□□□□ -1.41
ZNF540-201ENST00000316433 CRHP06850 196 aa6.26□□□□□ -1.41
ZNF540-201ENST00000316433 MPC1LP0DKB6 136 aa6.26□□□□□ -1.41
ZNF540-201ENST00000316433 PPP3CBP16298 524 aa6.26□□□□□ -1.41
ZNF540-201ENST00000316433 FPR1P21462 350 aa6.26□□□□□ -1.41
ZNF540-201ENST00000316433 XPAP23025 273 aaPredicted RBP6.26□□□□□ -1.41
ZNF540-201ENST00000316433 NFYAP23511 347 aaPredicted RBP6.26□□□□□ -1.41
ZNF540-201ENST00000316433 PSMA1P25786 263 aaKnown RBP6.26□□□□□ -1.41
ZNF540-201ENST00000316433 ABCD3P28288 659 aa6.26□□□□□ -1.41
ZNF540-201ENST00000316433 S100A11P31949 105 aa6.26□□□□□ -1.41
ZNF540-201ENST00000316433 AVPR1AP37288 418 aa6.26□□□□□ -1.41
ZNF540-201ENST00000316433 SELENOPP49908 381 aa6.26□□□□□ -1.41
ZNF540-201ENST00000316433 PGGT1BP53609 377 aa6.26□□□□□ -1.41
ZNF540-201ENST00000316433 CLDN8P56748 225 aa6.26□□□□□ -1.41
ZNF540-201ENST00000316433 PKIAP61925 76 aa6.26□□□□□ -1.41
ZNF540-201ENST00000316433 MAP4K2Q12851 820 aa6.26□□□□□ -1.41
ZNF540-201ENST00000316433 UBXN2BQ14CS0 331 aa6.26□□□□□ -1.41
ZNF540-201ENST00000316433 PEA15Q15121 130 aa6.26□□□□□ -1.41
ZNF540-201ENST00000316433 ZNF239Q16600 458 aaKnown RBP6.26□□□□□ -1.41
ZNF540-201ENST00000316433 INO80DQ53TQ3 878 aaPredicted RBP6.26□□□□□ -1.41
ZNF540-201ENST00000316433 SPIN4Q56A73 249 aa6.26□□□□□ -1.41
ZNF540-201ENST00000316433 SGO1Q5FBB7 561 aa6.26□□□□□ -1.41
ZNF540-201ENST00000316433 GCNT6Q5T4J0 391 aa6.26□□□□□ -1.41
ZNF540-201ENST00000316433 ARHGAP40Q5TG30 622 aa6.26□□□□□ -1.41
ZNF540-201ENST00000316433 MARC1Q5VT66 337 aa6.26□□□□□ -1.41
ZNF540-201ENST00000316433 LIPKQ5VXJ0 399 aa6.26□□□□□ -1.41
ZNF540-201ENST00000316433 WSCD1Q658N2 575 aa6.26□□□□□ -1.41
ZNF540-201ENST00000316433 RGMBQ6NW40 437 aa6.26□□□□□ -1.41
ZNF540-201ENST00000316433 UQCC3Q6UW78 93 aa6.26□□□□□ -1.41
ZNF540-201ENST00000316433 LRRN1Q6UXK5 716 aa6.26□□□□□ -1.41
ZNF540-201ENST00000316433 RPS27LQ71UM5 84 aaKnown RBP6.26□□□□□ -1.41
ZNF540-201ENST00000316433 LRRC70Q7Z2Q7 622 aa6.26□□□□□ -1.41
ZNF540-201ENST00000316433 HUS1BQ8NHY5 278 aa6.26□□□□□ -1.41
ZNF540-201ENST00000316433 CD200R1Q8TD46 325 aa6.26□□□□□ -1.41
ZNF540-201ENST00000316433 SLC39A7Q92504 469 aa6.26□□□□□ -1.41
ZNF540-201ENST00000316433 HRASLS5Q96KN8 279 aa6.26□□□□□ -1.41
ZNF540-201ENST00000316433 TCF25Q9BQ70 676 aa6.26□□□□□ -1.41
ZNF540-201ENST00000316433 MENTQ9BUN1 341 aa6.26□□□□□ -1.41
ZNF540-201ENST00000316433 JAM3Q9BX67 310 aa6.26□□□□□ -1.41
ZNF540-201ENST00000316433 CDCA4Q9BXL8 241 aa6.26□□□□□ -1.41
ZNF540-201ENST00000316433 HHATLQ9HCP6 504 aa6.26□□□□□ -1.41
ZNF540-201ENST00000316433 SLC2A6Q9UGQ3 507 aa6.26□□□□□ -1.41
ZNF540-201ENST00000316433 IKZF3Q9UKT9 509 aa6.26□□□□□ -1.41
ZNF540-201ENST00000316433 KCNIP3Q9Y2W7 256 aa6.26□□□□□ -1.41
ZNF540-201ENST00000316433 GOLT1BQ9Y3E0 138 aa6.26□□□□□ -1.41
ZNF540-201ENST00000316433 IRAK3Q9Y616 596 aa6.26□□□□□ -1.41
ZNF540-201ENST00000316433 TMEM218A2RU14 115 aa6.26□□□□□ -1.41
ZNF540-201ENST00000316433 HYKKA2RU49 373 aa6.26□□□□□ -1.41
ZNF540-201ENST00000316433 COLCA2A8K830 154 aa6.26□□□□□ -1.41
ZNF540-201ENST00000316433 A8MXE2 369 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms