RNA–Protein interactions for RNA: ENST00000315948.10

LYSMD3-201, Transcript of LysM domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD3, Length 4,259 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-201ENST00000315948 C16orf52Q8NHV5 167 aa6.5□□□□□ -1.37
LYSMD3-201ENST00000315948 FAM46AQ96IP4 442 aaKnown RBP6.5□□□□□ -1.37
LYSMD3-201ENST00000315948 OR8D2Q9GZM6 311 aa6.5□□□□□ -1.37
LYSMD3-201ENST00000315948 SLC22A11Q9NSA0 550 aa6.5□□□□□ -1.37
LYSMD3-201ENST00000315948 CUTCQ9NTM9 273 aa6.5□□□□□ -1.37
LYSMD3-201ENST00000315948 C20orf141Q9NUB4 165 aa6.5□□□□□ -1.37
LYSMD3-201ENST00000315948 C19orf53Q9UNZ5 99 aaPredicted RBP6.5□□□□□ -1.37
LYSMD3-201ENST00000315948 WBP11Q9Y2W2 641 aaKnown RBP6.5□□□□□ -1.37
LYSMD3-201ENST00000315948 A0A087WUU8 490 aa6.5□□□□□ -1.37
LYSMD3-201ENST00000315948 FAM86C2PA6NEL3 165 aa6.5□□□□□ -1.37
LYSMD3-201ENST00000315948 LILRA5A6NI73 299 aa6.5□□□□□ -1.37
LYSMD3-201ENST00000315948 H3BN98 237 aa6.5□□□□□ -1.37
LYSMD3-201ENST00000315948 TOR1BO14657 336 aa6.5□□□□□ -1.37
LYSMD3-201ENST00000315948 LAMTOR5O43504 91 aa6.5□□□□□ -1.37
LYSMD3-201ENST00000315948 CCNB2O95067 398 aa6.5□□□□□ -1.37
LYSMD3-201ENST00000315948 LCKP06239 509 aa6.5□□□□□ -1.37
LYSMD3-201ENST00000315948 RHCEP18577 417 aa6.5□□□□□ -1.37
LYSMD3-201ENST00000315948 CBLP22681 906 aa6.5□□□□□ -1.37
LYSMD3-201ENST00000315948 TSFMP43897 325 aaKnown RBP6.5□□□□□ -1.37
LYSMD3-201ENST00000315948 RAB38P57729 211 aa6.5□□□□□ -1.37
LYSMD3-201ENST00000315948 SOWAHCQ53LP3 525 aaPredicted RBP6.5□□□□□ -1.37
LYSMD3-201ENST00000315948 WDR45BQ5MNZ6 344 aa6.5□□□□□ -1.37
LYSMD3-201ENST00000315948 MRPL2Q5T653 305 aaKnown RBP6.5□□□□□ -1.37
LYSMD3-201ENST00000315948 PGBD2Q6P3X8 592 aa6.5□□□□□ -1.37
LYSMD3-201ENST00000315948 FAM199XQ6PEV8 388 aaPredicted RBP6.5□□□□□ -1.37
LYSMD3-201ENST00000315948 OR4K5Q8NGD3 323 aa6.5□□□□□ -1.37
LYSMD3-201ENST00000315948 SAP25Q8TEE9 199 aa6.5□□□□□ -1.37
LYSMD3-201ENST00000315948 CNOT9Q92600 299 aaKnown RBP6.5□□□□□ -1.37
LYSMD3-201ENST00000315948 RBM18Q96H35 190 aaKnown RBP6.5□□□□□ -1.37
LYSMD3-201ENST00000315948 ZNF607Q96SK3 696 aa6.5□□□□□ -1.37
LYSMD3-201ENST00000315948 ITPAQ9BY32 194 aa6.5□□□□□ -1.37
LYSMD3-201ENST00000315948 ROGDIQ9GZN7 287 aa6.5□□□□□ -1.37
LYSMD3-201ENST00000315948 GABARAPL1Q9H0R8 117 aa6.5□□□□□ -1.37
LYSMD3-201ENST00000315948 LYRM4Q9HD34 91 aa6.5□□□□□ -1.37
LYSMD3-201ENST00000315948 ATP13A2Q9NQ11 1180 aa6.5□□□□□ -1.37
LYSMD3-201ENST00000315948 FGF21Q9NSA1 209 aa6.5□□□□□ -1.37
LYSMD3-201ENST00000315948 KCND3Q9UK17 655 aa6.5□□□□□ -1.37
LYSMD3-201ENST00000315948 CDC42EP2O14613 210 aa6.5□□□□□ -1.37
LYSMD3-201ENST00000315948 SLC16A6O15403 523 aa6.5□□□□□ -1.37
LYSMD3-201ENST00000315948 ATE1O95260 518 aa6.5□□□□□ -1.37
LYSMD3-201ENST00000315948 TP53P04637 393 aaPredicted RBP6.5□□□□□ -1.37
LYSMD3-201ENST00000315948 RPLP0P05388 317 aaKnown RBP6.5□□□□□ -1.37
LYSMD3-201ENST00000315948 H1F0P07305 194 aaKnown RBP6.5□□□□□ -1.37
LYSMD3-201ENST00000315948 GSTM2P28161 218 aa6.5□□□□□ -1.37
LYSMD3-201ENST00000315948 EPHA8P29322 1005 aaPredicted RBP6.5□□□□□ -1.37
LYSMD3-201ENST00000315948 ARL4DP49703 201 aa6.5□□□□□ -1.37
LYSMD3-201ENST00000315948 RAD23AP54725 363 aa6.5□□□□□ -1.37
LYSMD3-201ENST00000315948 KCNC4Q03721 635 aa6.5□□□□□ -1.37
LYSMD3-201ENST00000315948 MAD2L1BPQ15013 274 aaPredicted RBP6.5□□□□□ -1.37
LYSMD3-201ENST00000315948 TRIM61Q5EBN2 209 aa6.5□□□□□ -1.37
LYSMD3-201ENST00000315948 COLEC12Q5KU26 742 aa6.5□□□□□ -1.37
LYSMD3-201ENST00000315948 ENTPD8Q5MY95 495 aa6.5□□□□□ -1.37
LYSMD3-201ENST00000315948 FCRLBQ6BAA4 426 aa6.5□□□□□ -1.37
LYSMD3-201ENST00000315948 KIF18BQ86Y91 864 aa6.5□□□□□ -1.37
LYSMD3-201ENST00000315948 PFN4Q8NHR9 129 aa6.5□□□□□ -1.37
LYSMD3-201ENST00000315948 CTHRC1Q96CG8 243 aa6.5□□□□□ -1.37
LYSMD3-201ENST00000315948 PRTFDC1Q9NRG1 225 aa6.5□□□□□ -1.37
LYSMD3-201ENST00000315948 DNAJC27Q9NZQ0 273 aa6.5□□□□□ -1.37
LYSMD3-201ENST00000315948 REV1Q9UBZ9 1251 aa6.5□□□□□ -1.37
LYSMD3-201ENST00000315948 ORC6Q9Y5N6 252 aa6.5□□□□□ -1.37
LYSMD3-201ENST00000315948 PCNX3Q9H6A9 2034 aa6.5□□□□□ -1.37
LYSMD3-201ENST00000315948 NUDT21O43809 227 aaKnown RBP6.49□□□□□ -1.37
LYSMD3-201ENST00000315948 SERPINB7O75635 380 aa6.49□□□□□ -1.37
LYSMD3-201ENST00000315948 RFPL3O75679 317 aa6.49□□□□□ -1.37
LYSMD3-201ENST00000315948 KCNK2O95069 426 aa6.49□□□□□ -1.37
LYSMD3-201ENST00000315948 MT-ND2P03891 347 aa6.49□□□□□ -1.37
LYSMD3-201ENST00000315948 CLPSP04118 112 aa6.49□□□□□ -1.37
LYSMD3-201ENST00000315948 ALPPP05187 535 aa6.49□□□□□ -1.37
LYSMD3-201ENST00000315948 GLB1P16278 677 aa6.49□□□□□ -1.37
LYSMD3-201ENST00000315948 ALDH3B2P48448 385 aa6.49□□□□□ -1.37
LYSMD3-201ENST00000315948 NR1H2P55055 460 aa6.49□□□□□ -1.37
LYSMD3-201ENST00000315948 TTC23Q5W5X9 447 aa6.49□□□□□ -1.37
LYSMD3-201ENST00000315948 OR8D4Q8NGM9 314 aa6.49□□□□□ -1.37
LYSMD3-201ENST00000315948 ZNF764Q96H86 408 aaPredicted RBP6.49□□□□□ -1.37
LYSMD3-201ENST00000315948 LANCL2Q9NS86 450 aa6.49□□□□□ -1.37
LYSMD3-201ENST00000315948 WDR70Q9NW82 654 aa6.49□□□□□ -1.37
LYSMD3-201ENST00000315948 NLGN3Q9NZ94 848 aa6.49□□□□□ -1.37
LYSMD3-201ENST00000315948 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP6.49□□□□□ -1.37
LYSMD3-201ENST00000315948 PLCL2Q9UPR0 1127 aa6.49□□□□□ -1.37
LYSMD3-201ENST00000315948 ZNF443Q9Y2A4 671 aaPredicted RBP6.49□□□□□ -1.37
LYSMD3-201ENST00000315948 CLCA3PQ9Y6N3 262 aa6.49□□□□□ -1.37
LYSMD3-201ENST00000315948 GVINP1Q7Z2Y8 2422 aa6.49□□□□□ -1.37
LYSMD3-201ENST00000315948 DSPPQ9NZW4 1301 aa6.49□□□□□ -1.37
LYSMD3-201ENST00000315948 PTPRZ1P23471 2315 aaPredicted RBP6.49□□□□□ -1.37
LYSMD3-201ENST00000315948 TMEM247A6NEH6 219 aa6.49□□□□□ -1.37
LYSMD3-201ENST00000315948 OIP5O43482 229 aa6.49□□□□□ -1.37
LYSMD3-201ENST00000315948 SLC2A10O95528 541 aa6.49□□□□□ -1.37
LYSMD3-201ENST00000315948 CT45A8P0DMV1 189 aa6.49□□□□□ -1.37
LYSMD3-201ENST00000315948 CT45A9P0DMV2 189 aa6.49□□□□□ -1.37
LYSMD3-201ENST00000315948 ARRB1P49407 418 aaPredicted RBP6.49□□□□□ -1.37
LYSMD3-201ENST00000315948 ZNF136P52737 540 aa6.49□□□□□ -1.37
LYSMD3-201ENST00000315948 HSD11B2P80365 405 aa6.49□□□□□ -1.37
LYSMD3-201ENST00000315948 EMX1Q04741 257 aaPredicted RBP6.49□□□□□ -1.37
LYSMD3-201ENST00000315948 CT45A2Q5DJT8 189 aa6.49□□□□□ -1.37
LYSMD3-201ENST00000315948 HEPHL1Q6MZM0 1159 aa6.49□□□□□ -1.37
LYSMD3-201ENST00000315948 ACSM5Q6NUN0 579 aa6.49□□□□□ -1.37
LYSMD3-201ENST00000315948 KLHL35Q6PF15 583 aa6.49□□□□□ -1.37
LYSMD3-201ENST00000315948 PAQR6Q6TCH4 344 aa6.49□□□□□ -1.37
LYSMD3-201ENST00000315948 SLC36A4Q6YBV0 504 aa6.49□□□□□ -1.37
LYSMD3-201ENST00000315948 SHFQ7M4L6 423 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms