RNA–Protein interactions for RNA: ENST00000315285.7

SPAST-201, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,117 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-201ENST00000315285 CLRN1P58418 232 aa13.01□□□□□ -0.33
SPAST-201ENST00000315285 WDR5P61964 334 aaKnown RBP13.01□□□□□ -0.33
SPAST-201ENST00000315285 VAMP2P63027 116 aa13.01□□□□□ -0.33
SPAST-201ENST00000315285 RAB40BQ12829 278 aa13.01□□□□□ -0.33
SPAST-201ENST00000315285 C6orf132Q5T0Z8 1188 aa13.01□□□□□ -0.33
SPAST-201ENST00000315285 MEX3DQ86XN8 651 aaKnown RBP13.01□□□□□ -0.33
SPAST-201ENST00000315285 CCDC28AQ8IWP9 274 aa13.01□□□□□ -0.33
SPAST-201ENST00000315285 ZNF283Q8N7M2 679 aa13.01□□□□□ -0.33
SPAST-201ENST00000315285 ADAMTS19Q8TE59 1207 aa13.01□□□□□ -0.33
SPAST-201ENST00000315285 TUBB1Q9H4B7 451 aa13.01□□□□□ -0.33
SPAST-201ENST00000315285 THSD1Q9NS62 852 aa13.01□□□□□ -0.33
SPAST-201ENST00000315285 MRPL15Q9P015 296 aaKnown RBP13.01□□□□□ -0.33
SPAST-201ENST00000315285 COPZ2Q9P299 210 aa13.01□□□□□ -0.33
SPAST-201ENST00000315285 UBQLN2Q9UHD9 624 aa13.01□□□□□ -0.33
SPAST-201ENST00000315285 HEMK1Q9Y5R4 338 aaPredicted RBP13.01□□□□□ -0.33
SPAST-201ENST00000315285 DNMT3AQ9Y6K1 912 aaPredicted RBP13.01□□□□□ -0.33
SPAST-201ENST00000315285 SLX4Q8IY92 1834 aa13.01□□□□□ -0.33
SPAST-201ENST00000315285 SDK1Q7Z5N4 2213 aa13.01□□□□□ -0.33
SPAST-201ENST00000315285 H0YIV9 168 aa13.01□□□□□ -0.33
SPAST-201ENST00000315285 NDUFB2O95178 105 aa13.01□□□□□ -0.33
SPAST-201ENST00000315285 ZNF888P0CJ79 500 aaPredicted RBP13.01□□□□□ -0.33
SPAST-201ENST00000315285 HHEXQ03014 270 aa13.01□□□□□ -0.33
SPAST-201ENST00000315285 LEG1Q6P5S2 330 aa13.01□□□□□ -0.33
SPAST-201ENST00000315285 Q6ZPB1 254 aaPredicted RBP13.01□□□□□ -0.33
SPAST-201ENST00000315285 POGLUT1Q8NBL1 392 aa13.01□□□□□ -0.33
SPAST-201ENST00000315285 MYLIPQ8WY64 445 aa13.01□□□□□ -0.33
SPAST-201ENST00000315285 ZNF471Q9BX82 626 aaPredicted RBP13.01□□□□□ -0.33
SPAST-201ENST00000315285 SAP130Q9H0E3 1048 aa13.01□□□□□ -0.33
SPAST-201ENST00000315285 VNN3Q9NY84 501 aa13.01□□□□□ -0.33
SPAST-201ENST00000315285 HS3ST2Q9Y278 367 aa13.01□□□□□ -0.33
SPAST-201ENST00000315285 ARAFP10398 606 aa13.01□□□□□ -0.33
SPAST-201ENST00000315285 SNTA1Q13424 505 aa13.01□□□□□ -0.33
SPAST-201ENST00000315285 B3GAT2Q9NPZ5 323 aa13.01□□□□□ -0.33
SPAST-201ENST00000315285 ASB6Q9NWX5 421 aa13.01□□□□□ -0.33
SPAST-201ENST00000315285 CLDN24A6NM45 220 aa13.01□□□□□ -0.33
SPAST-201ENST00000315285 CDC40O60508 579 aaKnown RBP eCLIP13.01□□□□□ -0.33
SPAST-201ENST00000315285 FMO6PO60774 539 aa13.01□□□□□ -0.33
SPAST-201ENST00000315285 CASRP41180 1078 aa13.01□□□□□ -0.33
SPAST-201ENST00000315285 ART1P52961 327 aa13.01□□□□□ -0.33
SPAST-201ENST00000315285 DEFB110Q30KQ9 67 aa13.01□□□□□ -0.33
SPAST-201ENST00000315285 LRRC37A5PQ49AS3 106 aa13.01□□□□□ -0.33
SPAST-201ENST00000315285 OTUD1Q5VV17 481 aaPredicted RBP13.01□□□□□ -0.33
SPAST-201ENST00000315285 PODNL1Q6PEZ8 512 aa13.01□□□□□ -0.33
SPAST-201ENST00000315285 OR5J2Q8NH18 312 aa13.01□□□□□ -0.33
SPAST-201ENST00000315285 TRMT10AQ8TBZ6 339 aaKnown RBP13.01□□□□□ -0.33
SPAST-201ENST00000315285 ADAMTS18Q8TE60 1221 aa13.01□□□□□ -0.33
SPAST-201ENST00000315285 TRIM43Q96BQ3 446 aaPredicted RBP13.01□□□□□ -0.33
SPAST-201ENST00000315285 NUMA1Q14980 2115 aa13□□□□□ -0.33
SPAST-201ENST00000315285 CREBL2O60519 120 aaPredicted RBP13□□□□□ -0.33
SPAST-201ENST00000315285 PLGP00747 810 aaPredicted RBP13□□□□□ -0.33
SPAST-201ENST00000315285 MAS1P04201 325 aa13□□□□□ -0.33
SPAST-201ENST00000315285 OCLNQ16625 522 aa13□□□□□ -0.33
SPAST-201ENST00000315285 SFRP4Q6FHJ7 346 aaPredicted RBP13□□□□□ -0.33
SPAST-201ENST00000315285 RFLNAQ6ZTI6 216 aa13□□□□□ -0.33
SPAST-201ENST00000315285 L3MBTL4Q8NA19 623 aa13□□□□□ -0.33
SPAST-201ENST00000315285 TMIEQ8NEW7 156 aa13□□□□□ -0.33
SPAST-201ENST00000315285 TMEM239Q8WW34 195 aa13□□□□□ -0.33
SPAST-201ENST00000315285 GAL3ST3Q96A11 431 aa13□□□□□ -0.33
SPAST-201ENST00000315285 FBRSQ9HAH7 460 aa13□□□□□ -0.33
SPAST-201ENST00000315285 J3KTA2 159 aa13□□□□□ -0.33
SPAST-201ENST00000315285 FBLP22087 321 aaKnown RBP13□□□□□ -0.33
SPAST-201ENST00000315285 RPL34P49207 117 aaKnown RBP13□□□□□ -0.33
SPAST-201ENST00000315285 DAPP51397 102 aa13□□□□□ -0.33
SPAST-201ENST00000315285 TRA2BP62995 288 aaKnown RBP13□□□□□ -0.33
SPAST-201ENST00000315285 WDR45BQ5MNZ6 344 aa13□□□□□ -0.33
SPAST-201ENST00000315285 HORMAD2Q8N7B1 307 aa13□□□□□ -0.33
SPAST-201ENST00000315285 NAXEQ8NCW5 288 aa13□□□□□ -0.33
SPAST-201ENST00000315285 OR52E1Q8NGJ3 308 aa13□□□□□ -0.33
SPAST-201ENST00000315285 OR13F1Q8NGS4 319 aa13□□□□□ -0.33
SPAST-201ENST00000315285 OR2A12Q8NGT7 310 aa13□□□□□ -0.33
SPAST-201ENST00000315285 ACOT11Q8WXI4 607 aaPredicted RBP13□□□□□ -0.33
SPAST-201ENST00000315285 HYLS1Q96M11 299 aa13□□□□□ -0.33
SPAST-201ENST00000315285 SLC22A12Q96S37 553 aa13□□□□□ -0.33
SPAST-201ENST00000315285 GSKIPQ9P0R6 139 aa13□□□□□ -0.33
SPAST-201ENST00000315285 IMPA1P29218 277 aa13□□□□□ -0.33
SPAST-201ENST00000315285 RIDAP52758 137 aaKnown RBP13□□□□□ -0.33
SPAST-201ENST00000315285 HOXC5Q00444 222 aa13□□□□□ -0.33
SPAST-201ENST00000315285 ELOAQ14241 798 aaKnown RBP13□□□□□ -0.33
SPAST-201ENST00000315285 SYPL1Q16563 259 aa13□□□□□ -0.33
SPAST-201ENST00000315285 FCRLBQ6BAA4 426 aa13□□□□□ -0.33
SPAST-201ENST00000315285 PYHIN1Q6K0P9 492 aa13□□□□□ -0.33
SPAST-201ENST00000315285 HMBOX1Q6NT76 420 aa13□□□□□ -0.33
SPAST-201ENST00000315285 TTLL10Q6ZVT0 673 aa13□□□□□ -0.33
SPAST-201ENST00000315285 ZNF619Q8N2I2 560 aa13□□□□□ -0.33
SPAST-201ENST00000315285 METTL4Q8N3J2 472 aa13□□□□□ -0.33
SPAST-201ENST00000315285 COQ8AQ8NI60 647 aa13□□□□□ -0.33
SPAST-201ENST00000315285 THAP3Q8WTV1 239 aaPredicted RBP13□□□□□ -0.33
SPAST-201ENST00000315285 RPL3LQ92901 407 aaKnown RBP13□□□□□ -0.33
SPAST-201ENST00000315285 TEX37Q96LM6 180 aa13□□□□□ -0.33
SPAST-201ENST00000315285 APOOQ9BUR5 198 aa13□□□□□ -0.33
SPAST-201ENST00000315285 MARCH5Q9NX47 278 aa13□□□□□ -0.33
SPAST-201ENST00000315285 FOXE1O00358 373 aaPredicted RBP13□□□□□ -0.33
SPAST-201ENST00000315285 PRAMEF2O60811 474 aa13□□□□□ -0.33
SPAST-201ENST00000315285 GKN3PP0CG01 181 aa13□□□□□ -0.33
SPAST-201ENST00000315285 MTHFD2P13995 350 aa13□□□□□ -0.33
SPAST-201ENST00000315285 PSMB5P28074 263 aa13□□□□□ -0.33
SPAST-201ENST00000315285 FNTBP49356 437 aa13□□□□□ -0.33
SPAST-201ENST00000315285 CTXN1P60606 82 aa13□□□□□ -0.33
SPAST-201ENST00000315285 BCL2L15Q5TBC7 163 aa13□□□□□ -0.33
SPAST-201ENST00000315285 SLC22A10Q63ZE4 541 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms