RNA–Protein interactions for RNA: ENST00000309328.7

SSSCA1-201, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSSCA1, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-201ENST00000309328 CDS1Q92903 461 aa16.46■□□□□ 0.23
SSSCA1-201ENST00000309328 ADOQ96SZ5 270 aa16.46■□□□□ 0.23
SSSCA1-201ENST00000309328 FAM173AQ9BQD7 235 aa16.46■□□□□ 0.23
SSSCA1-201ENST00000309328 YIPF4Q9BSR8 244 aa16.46■□□□□ 0.23
SSSCA1-201ENST00000309328 OR51I1Q9H343 314 aa16.46■□□□□ 0.23
SSSCA1-201ENST00000309328 EFCAB1Q9HAE3 211 aa16.46■□□□□ 0.23
SSSCA1-201ENST00000309328 PCDHGA10Q9Y5H3 936 aa16.46■□□□□ 0.23
SSSCA1-201ENST00000309328 CNTRLQ7Z7A1 2325 aa16.45■□□□□ 0.22
SSSCA1-201ENST00000309328 IGSF10Q6WRI0 2623 aa16.45■□□□□ 0.22
SSSCA1-201ENST00000309328 LOC100653049A0A140TA62 436 aa16.45■□□□□ 0.22
SSSCA1-201ENST00000309328 UGT2B11O75310 529 aa16.45■□□□□ 0.22
SSSCA1-201ENST00000309328 STX11O75558 287 aa16.45■□□□□ 0.22
SSSCA1-201ENST00000309328 KRT34O76011 436 aa16.45■□□□□ 0.22
SSSCA1-201ENST00000309328 RASAL1O95294 804 aa16.45■□□□□ 0.22
SSSCA1-201ENST00000309328 F10P00742 488 aa16.45■□□□□ 0.22
SSSCA1-201ENST00000309328 CRYABP02511 175 aaKnown RBP16.45■□□□□ 0.22
SSSCA1-201ENST00000309328 CNR1P21554 472 aa16.45■□□□□ 0.22
SSSCA1-201ENST00000309328 CRATP43155 626 aa16.45■□□□□ 0.22
SSSCA1-201ENST00000309328 ARHGAP11BQ3KRB8 267 aa16.45■□□□□ 0.22
SSSCA1-201ENST00000309328 AP1ARQ63HQ0 302 aa16.45■□□□□ 0.22
SSSCA1-201ENST00000309328 REP15Q6BDI9 236 aa16.45■□□□□ 0.22
SSSCA1-201ENST00000309328 HEPHL1Q6MZM0 1159 aa16.45■□□□□ 0.22
SSSCA1-201ENST00000309328 WDR53Q7Z5U6 358 aaPredicted RBP16.45■□□□□ 0.22
SSSCA1-201ENST00000309328 RETREG3Q86VR2 466 aa16.45■□□□□ 0.22
SSSCA1-201ENST00000309328 PRR22Q8IZ63 422 aa16.45■□□□□ 0.22
SSSCA1-201ENST00000309328 METTL25Q8N6Q8 603 aa16.45■□□□□ 0.22
SSSCA1-201ENST00000309328 ZNF527Q8NB42 609 aa16.45■□□□□ 0.22
SSSCA1-201ENST00000309328 CATSPER1Q8NEC5 780 aa16.45■□□□□ 0.22
SSSCA1-201ENST00000309328 OR4N2Q8NGD1 307 aa16.45■□□□□ 0.22
SSSCA1-201ENST00000309328 OR8J3Q8NGG0 315 aa16.45■□□□□ 0.22
SSSCA1-201ENST00000309328 FBXO30Q8TB52 745 aa16.45■□□□□ 0.22
SSSCA1-201ENST00000309328 PIK3R3Q92569 461 aa16.45■□□□□ 0.22
SSSCA1-201ENST00000309328 HGDQ93099 445 aa16.45■□□□□ 0.22
SSSCA1-201ENST00000309328 ANKRD27Q96NW4 1050 aa16.45■□□□□ 0.22
SSSCA1-201ENST00000309328 TRNT1Q96Q11 434 aaKnown RBP16.45■□□□□ 0.22
SSSCA1-201ENST00000309328 SPATA9Q9BWV2 254 aa16.45■□□□□ 0.22
SSSCA1-201ENST00000309328 MFRPQ9BY79 579 aa16.45■□□□□ 0.22
SSSCA1-201ENST00000309328 METTL7AQ9H8H3 244 aa16.45■□□□□ 0.22
SSSCA1-201ENST00000309328 VAPAQ9P0L0 249 aa16.45■□□□□ 0.22
SSSCA1-201ENST00000309328 P2RX2Q9UBL9 471 aa16.45■□□□□ 0.22
SSSCA1-201ENST00000309328 FAM208BQ5VWN6 2430 aa16.44■□□□□ 0.22
SSSCA1-201ENST00000309328 HMGN4O00479 90 aa16.44■□□□□ 0.22
SSSCA1-201ENST00000309328 FBP2O00757 339 aa16.44■□□□□ 0.22
SSSCA1-201ENST00000309328 NME6O75414 186 aaPredicted RBP16.44■□□□□ 0.22
SSSCA1-201ENST00000309328 SORBS2O94875 1100 aaKnown RBP16.44■□□□□ 0.22
SSSCA1-201ENST00000309328 BMP2P12643 396 aa16.44■□□□□ 0.22
SSSCA1-201ENST00000309328 HPGDP15428 266 aa16.44■□□□□ 0.22
SSSCA1-201ENST00000309328 GPX2P18283 190 aa16.44■□□□□ 0.22
SSSCA1-201ENST00000309328 DSTNP60981 165 aa16.44■□□□□ 0.22
SSSCA1-201ENST00000309328 RPS26P62854 115 aaKnown RBP16.44■□□□□ 0.22
SSSCA1-201ENST00000309328 NFATC3Q12968 1075 aa16.44■□□□□ 0.22
SSSCA1-201ENST00000309328 KRT72Q14CN4 511 aa16.44■□□□□ 0.22
SSSCA1-201ENST00000309328 RGNQ15493 299 aa16.44■□□□□ 0.22
SSSCA1-201ENST00000309328 PLEKHN1Q494U1 663 aaPredicted RBP16.44■□□□□ 0.22
SSSCA1-201ENST00000309328 NADK2Q4G0N4 442 aa16.44■□□□□ 0.22
SSSCA1-201ENST00000309328 RUNDC3AQ59EK9 446 aa16.44■□□□□ 0.22
SSSCA1-201ENST00000309328 PRAMEF8Q5VWM4 474 aa16.44■□□□□ 0.22
SSSCA1-201ENST00000309328 PRAMEF7Q5VXH5 474 aa16.44■□□□□ 0.22
SSSCA1-201ENST00000309328 TNFAIP8L2Q6P589 184 aaPredicted RBP16.44■□□□□ 0.22
SSSCA1-201ENST00000309328 HACD2Q6Y1H2 254 aa16.44■□□□□ 0.22
SSSCA1-201ENST00000309328 GALNTL5Q7Z4T8 443 aa16.44■□□□□ 0.22
SSSCA1-201ENST00000309328 MDGA2Q7Z553 956 aa16.44■□□□□ 0.22
SSSCA1-201ENST00000309328 PACS2Q86VP3 889 aa16.44■□□□□ 0.22
SSSCA1-201ENST00000309328 CLEC4FQ8N1N0 589 aa16.44■□□□□ 0.22
SSSCA1-201ENST00000309328 OR5D16Q8NGK9 328 aa16.44■□□□□ 0.22
SSSCA1-201ENST00000309328 XAGE5Q8WWM1 108 aa16.44■□□□□ 0.22
SSSCA1-201ENST00000309328 EFHD2Q96C19 240 aaPredicted RBP16.44■□□□□ 0.22
SSSCA1-201ENST00000309328 LRRC58Q96CX6 371 aa16.44■□□□□ 0.22
SSSCA1-201ENST00000309328 HOPXQ9BPY8 73 aaPredicted RBP16.44■□□□□ 0.22
SSSCA1-201ENST00000309328 ANGPTL4Q9BY76 406 aa16.44■□□□□ 0.22
SSSCA1-201ENST00000309328 SERHL2Q9H4I8 314 aa16.44■□□□□ 0.22
SSSCA1-201ENST00000309328 SDHAF3Q9NRP4 125 aa16.44■□□□□ 0.22
SSSCA1-201ENST00000309328 UBQLN4Q9NRR5 601 aa16.44■□□□□ 0.22
SSSCA1-201ENST00000309328 SLC6A13Q9NSD5 602 aa16.44■□□□□ 0.22
SSSCA1-201ENST00000309328 NDE1Q9NXR1 346 aa16.44■□□□□ 0.22
SSSCA1-201ENST00000309328 SLC25A37Q9NYZ2 338 aa16.44■□□□□ 0.22
SSSCA1-201ENST00000309328 MAP10Q9P2G4 905 aa16.44■□□□□ 0.22
SSSCA1-201ENST00000309328 BOKQ9UMX3 212 aaPredicted RBP16.44■□□□□ 0.22
SSSCA1-201ENST00000309328 CSAG2Q9Y5P2 127 aa16.44■□□□□ 0.22
SSSCA1-201ENST00000309328 ZFYVE26Q68DK2 2539 aa16.43■□□□□ 0.22
SSSCA1-201ENST00000309328 GXYLT2A0PJZ3 443 aa16.43■□□□□ 0.22
SSSCA1-201ENST00000309328 PRAMEF25A6NGN4 478 aa16.43■□□□□ 0.22
SSSCA1-201ENST00000309328 ACOT7O00154 380 aa16.43■□□□□ 0.22
SSSCA1-201ENST00000309328 PEX1O43933 1283 aa16.43■□□□□ 0.22
SSSCA1-201ENST00000309328 UNC5CO95185 931 aa16.43■□□□□ 0.22
SSSCA1-201ENST00000309328 OR12D1P0DN82 309 aa16.43■□□□□ 0.22
SSSCA1-201ENST00000309328 CCL3P10147 92 aa16.43■□□□□ 0.22
SSSCA1-201ENST00000309328 ELAVL4P26378 380 aaKnown RBP16.43■□□□□ 0.22
SSSCA1-201ENST00000309328 EVI2BP34910 448 aa16.43■□□□□ 0.22
SSSCA1-201ENST00000309328 MVDP53602 400 aa16.43■□□□□ 0.22
SSSCA1-201ENST00000309328 ART3Q13508 389 aa16.43■□□□□ 0.22
SSSCA1-201ENST00000309328 GTDC1Q4AE62 458 aa16.43■□□□□ 0.22
SSSCA1-201ENST00000309328 DDX59Q5T1V6 619 aaKnown RBP eCLIP16.43■□□□□ 0.22
SSSCA1-201ENST00000309328 MISPQ8IVT2 679 aa16.43■□□□□ 0.22
SSSCA1-201ENST00000309328 MSRB3Q8IXL7 192 aa16.43■□□□□ 0.22
SSSCA1-201ENST00000309328 OR5M3Q8NGP4 307 aa16.43■□□□□ 0.22
SSSCA1-201ENST00000309328 RNF138Q8WVD3 245 aa16.43■□□□□ 0.22
SSSCA1-201ENST00000309328 SDF2Q99470 211 aa16.43■□□□□ 0.22
SSSCA1-201ENST00000309328 DOHHQ9BU89 302 aa16.43■□□□□ 0.22
SSSCA1-201ENST00000309328 OSBPL11Q9BXB4 747 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms