RNA–Protein interactions for RNA: ENST00000307340.7

USH2A-201, Transcript of usherin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USH2A, Length 18,883 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-201ENST00000307340 PHC1P78364 1004 aa3.81□□□□□ -1.8
USH2A-201ENST00000307340 AGAP7PQ5VUJ5 663 aa3.81□□□□□ -1.8
USH2A-201ENST00000307340 RNLSQ5VYX0 342 aa3.81□□□□□ -1.8
USH2A-201ENST00000307340 IDO2Q6ZQW0 420 aa3.81□□□□□ -1.8
USH2A-201ENST00000307340 ALYREFQ86V81 257 aaKnown RBP3.81□□□□□ -1.8
USH2A-201ENST00000307340 KCNRGQ8N5I3 272 aa3.81□□□□□ -1.8
USH2A-201ENST00000307340 EFCAB3Q8N7B9 438 aa3.81□□□□□ -1.8
USH2A-201ENST00000307340 ZNF676Q8N7Q3 588 aa3.81□□□□□ -1.8
USH2A-201ENST00000307340 OR9K2Q8NGE7 335 aa3.81□□□□□ -1.8
USH2A-201ENST00000307340 XAGE5Q8WWM1 108 aa3.81□□□□□ -1.8
USH2A-201ENST00000307340 GLYATL1Q969I3 302 aa3.81□□□□□ -1.8
USH2A-201ENST00000307340 ABCG5Q9H222 651 aa3.81□□□□□ -1.8
USH2A-201ENST00000307340 K7EQM0 130 aa3.81□□□□□ -1.8
USH2A-201ENST00000307340 GPR171O14626 319 aa3.81□□□□□ -1.8
USH2A-201ENST00000307340 FANCGO15287 622 aa3.81□□□□□ -1.8
USH2A-201ENST00000307340 CALCBP10092 127 aa3.81□□□□□ -1.8
USH2A-201ENST00000307340 SELEP16581 610 aa3.81□□□□□ -1.8
USH2A-201ENST00000307340 ITPKBP27987 946 aa3.81□□□□□ -1.8
USH2A-201ENST00000307340 SYT6Q5T7P8 510 aaPredicted RBP3.81□□□□□ -1.8
USH2A-201ENST00000307340 PRAMEF17Q5VTA0 474 aa3.81□□□□□ -1.8
USH2A-201ENST00000307340 SLC39A4Q6P5W5 647 aa3.81□□□□□ -1.8
USH2A-201ENST00000307340 B3GNT9Q6UX72 402 aa3.81□□□□□ -1.8
USH2A-201ENST00000307340 ASPGQ86U10 573 aa3.81□□□□□ -1.8
USH2A-201ENST00000307340 CMTM8Q8IZV2 173 aa3.81□□□□□ -1.8
USH2A-201ENST00000307340 POU5F2Q8N7G0 328 aa3.81□□□□□ -1.8
USH2A-201ENST00000307340 BORCS7Q96B45 105 aa3.81□□□□□ -1.8
USH2A-201ENST00000307340 UBXN10Q96LJ8 280 aa3.81□□□□□ -1.8
USH2A-201ENST00000307340 APOLD1Q96LR9 279 aa3.81□□□□□ -1.8
USH2A-201ENST00000307340 CDK15Q96Q40 435 aa3.81□□□□□ -1.8
USH2A-201ENST00000307340 KXD1Q9BQD3 176 aa3.81□□□□□ -1.8
USH2A-201ENST00000307340 SLC25A32Q9H2D1 315 aa3.81□□□□□ -1.8
USH2A-201ENST00000307340 POT1Q9NUX5 634 aa3.81□□□□□ -1.8
USH2A-201ENST00000307340 CBY1Q9Y3M2 126 aa3.81□□□□□ -1.8
USH2A-201ENST00000307340 IGLV3-10A0A075B6K4 115 aa3.81□□□□□ -1.8
USH2A-201ENST00000307340 ATP6V1G1O75348 118 aa3.81□□□□□ -1.8
USH2A-201ENST00000307340 POP7O75817 140 aaKnown RBP3.81□□□□□ -1.8
USH2A-201ENST00000307340 OR2F2O95006 317 aa3.81□□□□□ -1.8
USH2A-201ENST00000307340 RAB3AP20336 220 aa3.81□□□□□ -1.8
USH2A-201ENST00000307340 RBMXP38159 391 aaKnown RBP3.81□□□□□ -1.8
USH2A-201ENST00000307340 OR2F1Q13607 317 aa3.81□□□□□ -1.8
USH2A-201ENST00000307340 PEA15Q15121 130 aa3.81□□□□□ -1.8
USH2A-201ENST00000307340 AGAP6Q5VW22 663 aa3.81□□□□□ -1.8
USH2A-201ENST00000307340 ISLR2Q6UXK2 745 aa3.81□□□□□ -1.8
USH2A-201ENST00000307340 OR4K1Q8NGD4 311 aa3.81□□□□□ -1.8
USH2A-201ENST00000307340 RHOXF1Q8NHV9 184 aa3.81□□□□□ -1.8
USH2A-201ENST00000307340 CD300LFQ8TDQ1 290 aa3.81□□□□□ -1.8
USH2A-201ENST00000307340 CNOT9Q92600 299 aaKnown RBP3.81□□□□□ -1.8
USH2A-201ENST00000307340 RPL3LQ92901 407 aaKnown RBP3.81□□□□□ -1.8
USH2A-201ENST00000307340 HMCESQ96FZ2 354 aa3.81□□□□□ -1.8
USH2A-201ENST00000307340 AGAP4Q96P64 663 aa3.81□□□□□ -1.8
USH2A-201ENST00000307340 TRMT61BQ9BVS5 477 aaKnown RBP3.81□□□□□ -1.8
USH2A-201ENST00000307340 XYLT2Q9H1B5 865 aa3.81□□□□□ -1.8
USH2A-201ENST00000307340 SLC39A1Q9NY26 324 aa3.81□□□□□ -1.8
USH2A-201ENST00000307340 ADAM18Q9Y3Q7 739 aa3.81□□□□□ -1.8
USH2A-201ENST00000307340 PCDHB14Q9Y5E9 798 aa3.81□□□□□ -1.8
USH2A-201ENST00000307340 HSBP1L1C9JCN9 74 aa3.81□□□□□ -1.8
USH2A-201ENST00000307340 ZNF354AO60765 605 aaPredicted RBP3.81□□□□□ -1.8
USH2A-201ENST00000307340 GPR32O75388 356 aa3.81□□□□□ -1.8
USH2A-201ENST00000307340 RHOUQ7L0Q8 258 aa3.81□□□□□ -1.8
USH2A-201ENST00000307340 GOLGA7Q7Z5G4 137 aa3.81□□□□□ -1.8
USH2A-201ENST00000307340 TEX29Q8N6K0 151 aa3.81□□□□□ -1.8
USH2A-201ENST00000307340 CHDHQ8NE62 594 aaPredicted RBP3.81□□□□□ -1.8
USH2A-201ENST00000307340 TMBIM1Q969X1 311 aa3.81□□□□□ -1.8
USH2A-201ENST00000307340 GFM1Q96RP9 751 aaKnown RBP3.81□□□□□ -1.8
USH2A-201ENST00000307340 CCSER2Q9H7U1 834 aa3.81□□□□□ -1.8
USH2A-201ENST00000307340 RHOFQ9HBH0 211 aa3.81□□□□□ -1.8
USH2A-201ENST00000307340 SLC1A7O00341 560 aa3.81□□□□□ -1.8
USH2A-201ENST00000307340 NDUFS4O43181 175 aa3.81□□□□□ -1.8
USH2A-201ENST00000307340 SGCEO43556 437 aa3.81□□□□□ -1.8
USH2A-201ENST00000307340 ACP2P11117 423 aa3.81□□□□□ -1.8
USH2A-201ENST00000307340 GGT5P36269 586 aa3.81□□□□□ -1.8
USH2A-201ENST00000307340 DHPSP49366 369 aaPredicted RBP3.81□□□□□ -1.8
USH2A-201ENST00000307340 OR5K2Q8NHB8 316 aa3.81□□□□□ -1.8
USH2A-201ENST00000307340 RNF170Q96K19 258 aa3.81□□□□□ -1.8
USH2A-201ENST00000307340 ALG8Q9BVK2 526 aa3.81□□□□□ -1.8
USH2A-201ENST00000307340 CLMPQ9H6B4 373 aa3.81□□□□□ -1.8
USH2A-201ENST00000307340 C1GALT1Q9NS00 363 aa3.81□□□□□ -1.8
USH2A-201ENST00000307340 TREX1Q9NSU2 369 aa3.81□□□□□ -1.8
USH2A-201ENST00000307340 QPCTLQ9NXS2 382 aa3.81□□□□□ -1.8
USH2A-201ENST00000307340 OGDHLQ9ULD0 1010 aa3.81□□□□□ -1.8
USH2A-201ENST00000307340 FAM205CA6NFA0 338 aa3.81□□□□□ -1.8
USH2A-201ENST00000307340 TO15178 435 aa3.81□□□□□ -1.8
USH2A-201ENST00000307340 ENGP17813 658 aa3.81□□□□□ -1.8
USH2A-201ENST00000307340 DTYMKP23919 212 aa3.81□□□□□ -1.8
USH2A-201ENST00000307340 DGKEP52429 567 aa3.81□□□□□ -1.8
USH2A-201ENST00000307340 TPBGQ13641 420 aa3.81□□□□□ -1.8
USH2A-201ENST00000307340 NTRK2Q16620 822 aa3.81□□□□□ -1.8
USH2A-201ENST00000307340 MICAQ29983 383 aa3.81□□□□□ -1.8
USH2A-201ENST00000307340 SIRPB2Q5JXA9 342 aa3.81□□□□□ -1.8
USH2A-201ENST00000307340 ELP2Q6IA86 826 aa3.81□□□□□ -1.8
USH2A-201ENST00000307340 ZCCHC23Q6ZST2 131 aa3.81□□□□□ -1.8
USH2A-201ENST00000307340 VN1R5Q7Z5H4 357 aa3.81□□□□□ -1.8
USH2A-201ENST00000307340 HSPBAP1Q96EW2 488 aa3.81□□□□□ -1.8
USH2A-201ENST00000307340 SPANXA1Q9NS26 97 aa3.81□□□□□ -1.8
USH2A-201ENST00000307340 CFAP97Q9P2B7 532 aa3.81□□□□□ -1.8
USH2A-201ENST00000307340 KCND3Q9UK17 655 aa3.81□□□□□ -1.8
USH2A-201ENST00000307340 TNFRSF10CO14798 259 aa3.81□□□□□ -1.8
USH2A-201ENST00000307340 CPNE3O75131 537 aaKnown RBP3.81□□□□□ -1.8
USH2A-201ENST00000307340 BAMBIQ13145 260 aa3.81□□□□□ -1.8
USH2A-201ENST00000307340 IL10RAQ13651 578 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms