RNA–Protein interactions for RNA: ENST00000306853.1

CSPG4P2Y-201, Transcript of CSPG4 pseudogene 2 Y-linked, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P2Y, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P2Y-201ENST00000306853 G6PC3Q9BUM1 346 aa10.09□□□□□ -0.79
CSPG4P2Y-201ENST00000306853 BTBD2Q9BX70 525 aa10.09□□□□□ -0.79
CSPG4P2Y-201ENST00000306853 TSPAN10Q9H1Z9 355 aaPredicted RBP10.09□□□□□ -0.79
CSPG4P2Y-201ENST00000306853 PIGUQ9H490 435 aa10.09□□□□□ -0.79
CSPG4P2Y-201ENST00000306853 EXD2Q9NVH0 621 aa10.09□□□□□ -0.79
CSPG4P2Y-201ENST00000306853 TMEM45AQ9NWC5 275 aa10.09□□□□□ -0.79
CSPG4P2Y-201ENST00000306853 GIN1Q9NXP7 522 aa10.09□□□□□ -0.79
CSPG4P2Y-201ENST00000306853 TUBA8Q9NY65 449 aaPredicted RBP10.09□□□□□ -0.79
CSPG4P2Y-201ENST00000306853 KLHL14Q9P2G3 628 aa10.09□□□□□ -0.79
CSPG4P2Y-201ENST00000306853 NPIPA1Q9UND3 350 aa10.09□□□□□ -0.79
CSPG4P2Y-201ENST00000306853 ABCG2Q9UNQ0 655 aa10.09□□□□□ -0.79
CSPG4P2Y-201ENST00000306853 SMG1Q96Q15 3661 aaKnown RBP10.09□□□□□ -0.79
CSPG4P2Y-201ENST00000306853 BOD1L1Q8NFC6 3051 aa10.09□□□□□ -0.79
CSPG4P2Y-201ENST00000306853 PINLYPA6NC86 204 aa10.08□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 ICOSLGO75144 302 aa10.08□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 UNC5CO95185 931 aa10.08□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 KRT75O95678 551 aa10.08□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 IL33O95760 270 aa10.08□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 AK1P00568 194 aa10.08□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 HPGDP15428 266 aa10.08□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 ELAVL4P26378 380 aaKnown RBP10.08□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 GDF1P27539 372 aa10.08□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 EVI2BP34910 448 aa10.08□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 TDGF1P3P51864 188 aa10.08□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 RPS26P62854 115 aaKnown RBP10.08□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 PPIAP62937 165 aaKnown RBP10.08□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 GNGT1P63211 74 aa10.08□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 HPCAP84074 193 aa10.08□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 KRTCAP3Q53RY4 240 aa10.08□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 DCST2Q5T1A1 773 aa10.08□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 SAXO2Q658L1 398 aa10.08□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 BICRALQ6AI39 1079 aa10.08□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 ZNF324BQ6AW86 544 aaPredicted RBP10.08□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 CGB2Q6NT52 195 aa10.08□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 FIGNL1Q6PIW4 674 aa10.08□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 C16orf62Q7Z3J2 963 aa10.08□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 CLEC4FQ8N1N0 589 aa10.08□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 OR5D16Q8NGK9 328 aa10.08□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 OR1J4Q8NGS1 313 aa10.08□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 GOT1L1Q8NHS2 421 aaPredicted RBP10.08□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 VPS33AQ96AX1 596 aa10.08□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 NEURL3Q96EH8 262 aa10.08□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 TMEM41AQ96HV5 264 aa10.08□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 BARD1Q99728 777 aaKnown RBP10.08□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 INPP5KQ9BT40 448 aa10.08□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 ANGPTL4Q9BY76 406 aa10.08□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 TBL1XR1Q9BZK7 514 aa10.08□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 FAM107BQ9H098 131 aa10.08□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 GALNT9Q9HCQ5 603 aa10.08□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 ZFP64Q9NPA5 681 aa10.08□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 SDHAF3Q9NRP4 125 aa10.08□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 GPATCH2Q9NW75 528 aa10.08□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 WIF1Q9Y5W5 379 aa10.08□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 DNAJC13O75165 2243 aa10.08□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 SCDO00767 359 aa10.07□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 GNB5O14775 395 aa10.07□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 ANGPT2O15123 496 aa10.07□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 ASNA1O43681 348 aa10.07□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 SCO2O43819 266 aa10.07□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 KCNK2O95069 426 aa10.07□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 WISP1O95388 367 aa10.07□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 UTS2O95399 124 aa10.07□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 GSNP06396 782 aa10.07□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 GNLYP22749 145 aa10.07□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 MST1P26927 711 aa10.07□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 LCN1P31025 176 aa10.07□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 MAP3K8P41279 467 aa10.07□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 CDKN2CP42773 168 aa10.07□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 MAGEA5P43359 124 aa10.07□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 ZFP36L2P47974 494 aaKnown RBP10.07□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 TRPC1P48995 793 aa10.07□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 CASP6P55212 293 aa10.07□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 TXNL4AP83876 142 aaKnown RBP10.07□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 MRPL49Q13405 166 aaKnown RBP10.07□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 TOMM20Q15388 145 aa10.07□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 CPEB4Q17RY0 729 aaKnown RBP eCLIP10.07□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 CCNJQ5T5M9 372 aa10.07□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 DESI1Q6ICB0 168 aa10.07□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 TNFAIP8L2Q6P589 184 aaPredicted RBP10.07□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 BLOC1S3Q6QNY0 202 aa10.07□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 GALNT10Q86SR1 603 aa10.07□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 TMEM251Q8N6I4 163 aa10.07□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 ZNF527Q8NB42 609 aa10.07□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 ZNF317Q96PQ6 595 aaPredicted RBP10.07□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 OR51I1Q9H343 314 aa10.07□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 LDAHQ9H6V9 325 aa10.07□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 EXO5Q9H790 373 aa10.07□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 ZNF703Q9H7S9 590 aaPredicted RBP10.07□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 HHATLQ9HCP6 504 aa10.07□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 QPCTLQ9NXS2 382 aa10.07□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 PPP4R1LQ9P1A2 415 aa10.07□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 LEF1Q9UJU2 399 aaPredicted RBP10.07□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 ZNF407Q9C0G0 2248 aa10.06□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 LRRC3CA6NJW4 275 aa10.06□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 SNPHO15079 494 aa10.06□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 TRIM3O75382 744 aaPredicted RBP10.06□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 GLSO94925 669 aaPredicted RBP10.06□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 CBX6O95503 412 aa10.06□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 ZCCHC18P0CG32 403 aa10.06□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 OR12D1P0DN82 309 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms