RNA–Protein interactions for RNA: ENST00000306042.9

PTPRE-202, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 1 (best) BASIC

Gene PTPRE, Length 4,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-202ENST00000306042 DAPP1Q9UN19 280 aa8.68□□□□□ -1.02
PTPRE-202ENST00000306042 SHROOM3Q8TF72 1996 aa8.68□□□□□ -1.02
PTPRE-202ENST00000306042 DCDC2BA2VCK2 349 aa8.68□□□□□ -1.02
PTPRE-202ENST00000306042 PNMTP11086 282 aa8.68□□□□□ -1.02
PTPRE-202ENST00000306042 SLC15A1P46059 708 aa8.68□□□□□ -1.02
PTPRE-202ENST00000306042 HTR3AP46098 478 aa8.68□□□□□ -1.02
PTPRE-202ENST00000306042 TMED1Q13445 227 aa8.68□□□□□ -1.02
PTPRE-202ENST00000306042 FAM53BQ14153 422 aa8.68□□□□□ -1.02
PTPRE-202ENST00000306042 TMEM207Q6UWW9 146 aa8.68□□□□□ -1.02
PTPRE-202ENST00000306042 AHSA2Q719I0 299 aa8.68□□□□□ -1.02
PTPRE-202ENST00000306042 LIX1LQ8IVB5 337 aa8.68□□□□□ -1.02
PTPRE-202ENST00000306042 SLITRK4Q8IW52 837 aa8.68□□□□□ -1.02
PTPRE-202ENST00000306042 ZNF433Q8N7K0 673 aaPredicted RBP8.68□□□□□ -1.02
PTPRE-202ENST00000306042 OR2A1Q8NGT9 310 aa8.68□□□□□ -1.02
PTPRE-202ENST00000306042 THEM6Q8WUY1 208 aa8.68□□□□□ -1.02
PTPRE-202ENST00000306042 C8orf44Q96CB5 159 aa8.68□□□□□ -1.02
PTPRE-202ENST00000306042 ARL5BQ96KC2 179 aa8.68□□□□□ -1.02
PTPRE-202ENST00000306042 ERMAPQ96PL5 475 aaPredicted RBP8.68□□□□□ -1.02
PTPRE-202ENST00000306042 PIP5K1AQ99755 562 aa8.68□□□□□ -1.02
PTPRE-202ENST00000306042 SGPP1Q9BX95 441 aa8.68□□□□□ -1.02
PTPRE-202ENST00000306042 C6orf62Q9GZU0 229 aaPredicted RBP8.68□□□□□ -1.02
PTPRE-202ENST00000306042 RPL36Q9Y3U8 105 aaKnown RBP8.68□□□□□ -1.02
PTPRE-202ENST00000306042 PTPRFP10586 1907 aa8.68□□□□□ -1.02
PTPRE-202ENST00000306042 SH3PXD2BA1X283 911 aa8.68□□□□□ -1.02
PTPRE-202ENST00000306042 H0YC42 278 aa8.68□□□□□ -1.02
PTPRE-202ENST00000306042 HCRTR1O43613 425 aa8.68□□□□□ -1.02
PTPRE-202ENST00000306042 FMO6PO60774 539 aa8.68□□□□□ -1.02
PTPRE-202ENST00000306042 CELA2BP08218 269 aaPredicted RBP8.68□□□□□ -1.02
PTPRE-202ENST00000306042 ZNF20P17024 532 aa8.68□□□□□ -1.02
PTPRE-202ENST00000306042 HTR1EP28566 365 aa8.68□□□□□ -1.02
PTPRE-202ENST00000306042 DMPKQ09013 629 aa8.68□□□□□ -1.02
PTPRE-202ENST00000306042 PDK3Q15120 406 aa8.68□□□□□ -1.02
PTPRE-202ENST00000306042 IQCCQ4KMZ1 466 aa8.68□□□□□ -1.02
PTPRE-202ENST00000306042 SLC48A1Q6P1K1 146 aa8.68□□□□□ -1.02
PTPRE-202ENST00000306042 MZT2AQ6P582 158 aa8.68□□□□□ -1.02
PTPRE-202ENST00000306042 VASH1Q7L8A9 365 aaPredicted RBP8.68□□□□□ -1.02
PTPRE-202ENST00000306042 SLC15A3Q8IY34 581 aa8.68□□□□□ -1.02
PTPRE-202ENST00000306042 OR7G1Q8NGA0 311 aa8.68□□□□□ -1.02
PTPRE-202ENST00000306042 RNASE11Q8TAA1 199 aaKnown RBP8.68□□□□□ -1.02
PTPRE-202ENST00000306042 PMM1Q92871 262 aa8.68□□□□□ -1.02
PTPRE-202ENST00000306042 TESCQ96BS2 214 aa8.68□□□□□ -1.02
PTPRE-202ENST00000306042 PCDHGB1Q9Y5G3 927 aa8.68□□□□□ -1.02
PTPRE-202ENST00000306042 RGS10O43665 173 aa8.67□□□□□ -1.02
PTPRE-202ENST00000306042 GCAP28676 217 aa8.67□□□□□ -1.02
PTPRE-202ENST00000306042 DCTP40126 519 aa8.67□□□□□ -1.02
PTPRE-202ENST00000306042 ILKQ13418 452 aa8.67□□□□□ -1.02
PTPRE-202ENST00000306042 DAG1Q14118 895 aa8.67□□□□□ -1.02
PTPRE-202ENST00000306042 MEP1AQ16819 746 aa8.67□□□□□ -1.02
PTPRE-202ENST00000306042 FCRLBQ6BAA4 426 aa8.67□□□□□ -1.02
PTPRE-202ENST00000306042 RPL13AP3Q6NVV1 102 aa8.67□□□□□ -1.02
PTPRE-202ENST00000306042 CLVS1Q8IUQ0 354 aaPredicted RBP8.67□□□□□ -1.02
PTPRE-202ENST00000306042 ZCCHC7Q8N3Z6 543 aaKnown RBP8.67□□□□□ -1.02
PTPRE-202ENST00000306042 ZNF676Q8N7Q3 588 aa8.67□□□□□ -1.02
PTPRE-202ENST00000306042 NANOS1Q8WY41 292 aaKnown RBP8.67□□□□□ -1.02
PTPRE-202ENST00000306042 OR4K3Q96R72 315 aa8.67□□□□□ -1.02
PTPRE-202ENST00000306042 OR7D2Q96RA2 312 aa8.67□□□□□ -1.02
PTPRE-202ENST00000306042 FAM192AQ9GZU8 254 aa8.67□□□□□ -1.02
PTPRE-202ENST00000306042 HDHD2Q9H0R4 259 aa8.67□□□□□ -1.02
PTPRE-202ENST00000306042 NCOR1O75376 2440 aa8.67□□□□□ -1.02
PTPRE-202ENST00000306042 EI24O14681 340 aa8.67□□□□□ -1.02
PTPRE-202ENST00000306042 NELFEP18615 380 aaKnown RBP8.67□□□□□ -1.02
PTPRE-202ENST00000306042 CHN2P52757 468 aa8.67□□□□□ -1.02
PTPRE-202ENST00000306042 GALK2Q01415 458 aa8.67□□□□□ -1.02
PTPRE-202ENST00000306042 TGFBR3Q03167 851 aa8.67□□□□□ -1.02
PTPRE-202ENST00000306042 ARSJQ5FYB0 599 aaPredicted RBP8.67□□□□□ -1.02
PTPRE-202ENST00000306042 RPS26P11Q5JNZ5 115 aaPredicted RBP8.67□□□□□ -1.02
PTPRE-202ENST00000306042 CPEB2Q7Z5Q1 589 aaKnown RBP8.67□□□□□ -1.02
PTPRE-202ENST00000306042 SPRED1Q7Z699 444 aa8.67□□□□□ -1.02
PTPRE-202ENST00000306042 IZUMO1Q8IYV9 350 aa8.67□□□□□ -1.02
PTPRE-202ENST00000306042 TSPAN14Q8NG11 270 aa8.67□□□□□ -1.02
PTPRE-202ENST00000306042 C3orf30Q96M34 536 aa8.67□□□□□ -1.02
PTPRE-202ENST00000306042 SORT1Q99523 831 aa8.67□□□□□ -1.02
PTPRE-202ENST00000306042 NUAK2Q9H093 628 aa8.67□□□□□ -1.02
PTPRE-202ENST00000306042 LIN28AQ9H9Z2 209 aaKnown RBP8.67□□□□□ -1.02
PTPRE-202ENST00000306042 LINC00854A0A1B0GVQ3 168 aa8.67□□□□□ -1.02
PTPRE-202ENST00000306042 UNC119BA6NIH7 251 aa8.67□□□□□ -1.02
PTPRE-202ENST00000306042 FAAHO00519 579 aa8.67□□□□□ -1.02
PTPRE-202ENST00000306042 PRKRAO75569 313 aaKnown RBP8.67□□□□□ -1.02
PTPRE-202ENST00000306042 IGHV4-34P06331 123 aa8.67□□□□□ -1.02
PTPRE-202ENST00000306042 ZGLP1P0C6A0 271 aa8.67□□□□□ -1.02
PTPRE-202ENST00000306042 TMEM64Q6YI46 380 aa8.67□□□□□ -1.02
PTPRE-202ENST00000306042 OR1N1Q8NGS0 311 aa8.67□□□□□ -1.02
PTPRE-202ENST00000306042 TM4SF18Q96CE8 201 aa8.67□□□□□ -1.02
PTPRE-202ENST00000306042 COQ8BQ96D53 544 aa8.67□□□□□ -1.02
PTPRE-202ENST00000306042 MFRPQ9BY79 579 aa8.67□□□□□ -1.02
PTPRE-202ENST00000306042 D6RAR5 112 aa8.66□□□□□ -1.02
PTPRE-202ENST00000306042 ZNF670-ZNF695F2Z2N8 137 aa8.66□□□□□ -1.02
PTPRE-202ENST00000306042 PLPP1O14494 284 aa8.66□□□□□ -1.02
PTPRE-202ENST00000306042 RHCEP18577 417 aa8.66□□□□□ -1.02
PTPRE-202ENST00000306042 CAPN3P20807 821 aa8.66□□□□□ -1.02
PTPRE-202ENST00000306042 SSTR4P31391 388 aa8.66□□□□□ -1.02
PTPRE-202ENST00000306042 EEF1A1P68104 462 aaKnown RBP8.66□□□□□ -1.02
PTPRE-202ENST00000306042 PSPHP78330 225 aa8.66□□□□□ -1.02
PTPRE-202ENST00000306042 RHDQ02161 417 aa8.66□□□□□ -1.02
PTPRE-202ENST00000306042 CARTPTQ16568 116 aa8.66□□□□□ -1.02
PTPRE-202ENST00000306042 EXOC3L2Q2M3D2 409 aa8.66□□□□□ -1.02
PTPRE-202ENST00000306042 PDZK1Q5T2W1 519 aa8.66□□□□□ -1.02
PTPRE-202ENST00000306042 SLC22A16Q86VW1 577 aa8.66□□□□□ -1.02
PTPRE-202ENST00000306042 C19orf18Q8NEA5 215 aa8.66□□□□□ -1.02
PTPRE-202ENST00000306042 CCDC106Q9BWC9 280 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms