RNA–Protein interactions for RNA: ENST00000306014.9

DDX54-201, Transcript of DEAD-box helicase 54, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDX54, Length 4,377 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-201ENST00000306014 TMEM221A6NGB7 291 aa12.53□□□□□ -0.4
DDX54-201ENST00000306014 PSMD9O00233 223 aa12.53□□□□□ -0.4
DDX54-201ENST00000306014 FOXE1O00358 373 aaPredicted RBP12.53□□□□□ -0.4
DDX54-201ENST00000306014 ZDHHC11BP0C7U3 371 aa12.53□□□□□ -0.4
DDX54-201ENST00000306014 ACP2P11117 423 aa12.53□□□□□ -0.4
DDX54-201ENST00000306014 ELAVL4P26378 380 aaKnown RBP12.53□□□□□ -0.4
DDX54-201ENST00000306014 MAGEA2P43356 314 aa12.53□□□□□ -0.4
DDX54-201ENST00000306014 POU6F2P78424 691 aaPredicted RBP12.53□□□□□ -0.4
DDX54-201ENST00000306014 SELENBP1Q13228 472 aa12.53□□□□□ -0.4
DDX54-201ENST00000306014 OR4K13Q8NH42 304 aa12.53□□□□□ -0.4
DDX54-201ENST00000306014 FCAMRQ8WWV6 532 aa12.53□□□□□ -0.4
DDX54-201ENST00000306014 SLC35B4Q969S0 331 aa12.53□□□□□ -0.4
DDX54-201ENST00000306014 NEDD4LQ96PU5 975 aa12.53□□□□□ -0.4
DDX54-201ENST00000306014 RC3H2Q9HBD1 1191 aaKnown RBP12.53□□□□□ -0.4
DDX54-201ENST00000306014 MRTO4Q9UKD2 239 aaKnown RBP12.53□□□□□ -0.4
DDX54-201ENST00000306014 NINQ8N4C6 2090 aa12.53□□□□□ -0.4
DDX54-201ENST00000306014 GREB1LQ9C091 1923 aaPredicted RBP12.53□□□□□ -0.4
DDX54-201ENST00000306014 LRRC37AA6NMS7 1700 aa12.53□□□□□ -0.4
DDX54-201ENST00000306014 RENP00797 406 aa12.53□□□□□ -0.4
DDX54-201ENST00000306014 CD3GP09693 182 aa12.53□□□□□ -0.4
DDX54-201ENST00000306014 AK4P27144 223 aaPredicted RBP12.53□□□□□ -0.4
DDX54-201ENST00000306014 RPS5P46782 204 aaKnown RBP12.53□□□□□ -0.4
DDX54-201ENST00000306014 SLC6A12P48065 614 aa12.53□□□□□ -0.4
DDX54-201ENST00000306014 SCGB2B2Q4G0G5 96 aa12.53□□□□□ -0.4
DDX54-201ENST00000306014 TMEM69Q5SWH9 247 aa12.53□□□□□ -0.4
DDX54-201ENST00000306014 ASPGQ86U10 573 aa12.53□□□□□ -0.4
DDX54-201ENST00000306014 FTMTQ8N4E7 242 aa12.53□□□□□ -0.4
DDX54-201ENST00000306014 FYTTD1Q96QD9 318 aaKnown RBP12.53□□□□□ -0.4
DDX54-201ENST00000306014 B3GNT4Q9C0J1 378 aa12.53□□□□□ -0.4
DDX54-201ENST00000306014 OR10A4Q9H209 315 aa12.53□□□□□ -0.4
DDX54-201ENST00000306014 EXO5Q9H790 373 aa12.53□□□□□ -0.4
DDX54-201ENST00000306014 SIRT5Q9NXA8 310 aa12.53□□□□□ -0.4
DDX54-201ENST00000306014 MGAT4CQ9UBM8 478 aa12.53□□□□□ -0.4
DDX54-201ENST00000306014 PAPPA2Q9BXP8 1791 aa12.52□□□□□ -0.4
DDX54-201ENST00000306014 ZFC3H1O60293 1989 aaKnown RBP12.52□□□□□ -0.4
DDX54-201ENST00000306014 OR14I1A6ND48 311 aa12.52□□□□□ -0.4
DDX54-201ENST00000306014 OR52A4PA6NMU1 304 aa12.52□□□□□ -0.4
DDX54-201ENST00000306014 UPK1AO00322 258 aa12.52□□□□□ -0.4
DDX54-201ENST00000306014 FMO6PO60774 539 aa12.52□□□□□ -0.4
DDX54-201ENST00000306014 TIMP1P01033 207 aa12.52□□□□□ -0.4
DDX54-201ENST00000306014 HTR1AP08908 422 aa12.52□□□□□ -0.4
DDX54-201ENST00000306014 ZNF24P17028 368 aa12.52□□□□□ -0.4
DDX54-201ENST00000306014 ACTC1P68032 377 aa12.52□□□□□ -0.4
DDX54-201ENST00000306014 ACTA1P68133 377 aa12.52□□□□□ -0.4
DDX54-201ENST00000306014 ZNF234Q14588 700 aa12.52□□□□□ -0.4
DDX54-201ENST00000306014 SEC23BQ15437 767 aa12.52□□□□□ -0.4
DDX54-201ENST00000306014 TRAM1Q15629 374 aa12.52□□□□□ -0.4
DDX54-201ENST00000306014 PGBD2Q6P3X8 592 aa12.52□□□□□ -0.4
DDX54-201ENST00000306014 GAREM2Q75VX8 874 aa12.52□□□□□ -0.4
DDX54-201ENST00000306014 PAQR7Q86WK9 346 aa12.52□□□□□ -0.4
DDX54-201ENST00000306014 VRK2Q86Y07 508 aa12.52□□□□□ -0.4
DDX54-201ENST00000306014 SLC39A11Q8N1S5 342 aa12.52□□□□□ -0.4
DDX54-201ENST00000306014 C12orf76Q8N812 135 aaPredicted RBP12.52□□□□□ -0.4
DDX54-201ENST00000306014 OR52E2Q8NGJ4 325 aa12.52□□□□□ -0.4
DDX54-201ENST00000306014 OR8S1Q8NH09 359 aa12.52□□□□□ -0.4
DDX54-201ENST00000306014 TCEAL4Q96EI5 215 aa12.52□□□□□ -0.4
DDX54-201ENST00000306014 TOX2Q96NM4 488 aa12.52□□□□□ -0.4
DDX54-201ENST00000306014 NECTIN4Q96NY8 510 aa12.52□□□□□ -0.4
DDX54-201ENST00000306014 GAS2L1Q99501 681 aaPredicted RBP12.52□□□□□ -0.4
DDX54-201ENST00000306014 CTRCQ99895 268 aa12.52□□□□□ -0.4
DDX54-201ENST00000306014 RASD1Q9Y272 281 aa12.52□□□□□ -0.4
DDX54-201ENST00000306014 MICAL3Q7RTP6 2002 aa12.52□□□□□ -0.4
DDX54-201ENST00000306014 LOC100509620A0A075B734 347 aa12.52□□□□□ -0.41
DDX54-201ENST00000306014 SLCO2B1O94956 709 aa12.52□□□□□ -0.41
DDX54-201ENST00000306014 SOX30O94993 753 aa12.52□□□□□ -0.41
DDX54-201ENST00000306014 CRYZL1O95825 349 aa12.52□□□□□ -0.41
DDX54-201ENST00000306014 NPPBP16860 134 aa12.52□□□□□ -0.41
DDX54-201ENST00000306014 RACK1P63244 317 aaKnown RBP12.52□□□□□ -0.41
DDX54-201ENST00000306014 C6orf132Q5T0Z8 1188 aa12.52□□□□□ -0.41
DDX54-201ENST00000306014 PAQR6Q6TCH4 344 aa12.52□□□□□ -0.41
DDX54-201ENST00000306014 MS4A15Q8N5U1 240 aa12.52□□□□□ -0.41
DDX54-201ENST00000306014 BEST4Q8NFU0 473 aa12.52□□□□□ -0.41
DDX54-201ENST00000306014 WDR20Q8TBZ3 569 aa12.52□□□□□ -0.41
DDX54-201ENST00000306014 FKBP10Q96AY3 582 aa12.52□□□□□ -0.41
DDX54-201ENST00000306014 PRR14Q9BWN1 585 aa12.52□□□□□ -0.41
DDX54-201ENST00000306014 PINK1Q9BXM7 581 aa12.52□□□□□ -0.41
DDX54-201ENST00000306014 GABARAPL3Q9BY60 117 aa12.52□□□□□ -0.41
DDX54-201ENST00000306014 TMEM38AQ9H6F2 299 aa12.52□□□□□ -0.41
DDX54-201ENST00000306014 PELI2Q9HAT8 420 aa12.52□□□□□ -0.41
DDX54-201ENST00000306014 Q9N2J8 555 aa12.52□□□□□ -0.41
DDX54-201ENST00000306014 PLCXD1Q9NUJ7 323 aa12.52□□□□□ -0.41
DDX54-201ENST00000306014 ALG5Q9Y673 324 aa12.52□□□□□ -0.41
DDX54-201ENST00000306014 COQ9O75208 318 aa12.52□□□□□ -0.41
DDX54-201ENST00000306014 CDC123O75794 336 aaPredicted RBP12.52□□□□□ -0.41
DDX54-201ENST00000306014 ADH7P40394 386 aa12.52□□□□□ -0.41
DDX54-201ENST00000306014 PLK5Q496M5 336 aa12.52□□□□□ -0.41
DDX54-201ENST00000306014 CCDC157Q569K6 752 aa12.52□□□□□ -0.41
DDX54-201ENST00000306014 PYHIN1Q6K0P9 492 aa12.52□□□□□ -0.41
DDX54-201ENST00000306014 FAHD1Q6P587 224 aa12.52□□□□□ -0.41
DDX54-201ENST00000306014 ACOT4Q8N9L9 421 aa12.52□□□□□ -0.41
DDX54-201ENST00000306014 GATSQ8NAP1 163 aa12.52□□□□□ -0.41
DDX54-201ENST00000306014 OR5W2Q8NH69 310 aa12.52□□□□□ -0.41
DDX54-201ENST00000306014 DNAJA3Q96EY1 480 aa12.52□□□□□ -0.41
DDX54-201ENST00000306014 GPER1Q99527 375 aa12.52□□□□□ -0.41
DDX54-201ENST00000306014 ACTRT3Q9BYD9 372 aa12.52□□□□□ -0.41
DDX54-201ENST00000306014 MTHFD2LQ9H903 347 aaPredicted RBP12.52□□□□□ -0.41
DDX54-201ENST00000306014 TEX10Q9NXF1 929 aaPredicted RBP12.52□□□□□ -0.41
DDX54-201ENST00000306014 HYKKA2RU49 373 aa12.51□□□□□ -0.41
DDX54-201ENST00000306014 A8MUA0 341 aa12.51□□□□□ -0.41
DDX54-201ENST00000306014 GABRPO00591 440 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms