RNA–Protein interactions for RNA: ENST00000305264.7

HDAC3-201, Transcript of histone deacetylase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC3, Length 1,959 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-201ENST00000305264 CEACAM7Q14002 265 aa25■■□□□ 1.59
HDAC3-201ENST00000305264 TBR1Q16650 682 aa25■■□□□ 1.59
HDAC3-201ENST00000305264 GPAT3Q53EU6 434 aa25■■□□□ 1.59
HDAC3-201ENST00000305264 DESI1Q6ICB0 168 aa25■■□□□ 1.59
HDAC3-201ENST00000305264 CLPTM1LQ96KA5 538 aa25■■□□□ 1.59
HDAC3-201ENST00000305264 STMN3Q9NZ72 180 aa25■■□□□ 1.59
HDAC3-201ENST00000305264 SLC28A2O43868 658 aa25■■□□□ 1.59
HDAC3-201ENST00000305264 H6PDO95479 791 aa25■■□□□ 1.59
HDAC3-201ENST00000305264 SAMD4BQ5PRF9 694 aaKnown RBP25■■□□□ 1.59
HDAC3-201ENST00000305264 SLC15A4Q8N697 577 aa25■■□□□ 1.59
HDAC3-201ENST00000305264 ASB15Q8WXK1 588 aa25■■□□□ 1.59
HDAC3-201ENST00000305264 EXTL1Q92935 676 aa25■■□□□ 1.59
HDAC3-201ENST00000305264 THTPAQ9BU02 230 aa25■■□□□ 1.59
HDAC3-201ENST00000305264 SPATA9Q9BWV2 254 aa25■■□□□ 1.59
HDAC3-201ENST00000305264 CADM1Q9BY67 442 aaKnown RBP25■■□□□ 1.59
HDAC3-201ENST00000305264 ZBTB20Q9HC78 741 aaPredicted RBP25■■□□□ 1.59
HDAC3-201ENST00000305264 ANKRD10Q9NXR5 420 aa25■■□□□ 1.59
HDAC3-201ENST00000305264 CD300AQ9UGN4 299 aa25■■□□□ 1.59
HDAC3-201ENST00000305264 LIPT1Q9Y234 373 aa25■■□□□ 1.59
HDAC3-201ENST00000305264 TSPAN2O60636 221 aa24.99■■□□□ 1.59
HDAC3-201ENST00000305264 REM1O75628 298 aa24.99■■□□□ 1.59
HDAC3-201ENST00000305264 AK1P00568 194 aa24.99■■□□□ 1.59
HDAC3-201ENST00000305264 FBXO45P0C2W1 286 aa24.99■■□□□ 1.59
HDAC3-201ENST00000305264 TCN1P20061 433 aaPredicted RBP24.99■■□□□ 1.59
HDAC3-201ENST00000305264 PSPHP78330 225 aa24.99■■□□□ 1.59
HDAC3-201ENST00000305264 CDK6Q00534 326 aa24.99■■□□□ 1.59
HDAC3-201ENST00000305264 SCARB2Q14108 478 aa24.99■■□□□ 1.59
HDAC3-201ENST00000305264 RPS26P11Q5JNZ5 115 aaPredicted RBP24.99■■□□□ 1.59
HDAC3-201ENST00000305264 ISLR2Q6UXK2 745 aa24.99■■□□□ 1.59
HDAC3-201ENST00000305264 YTHDF3Q7Z739 585 aaKnown RBP24.99■■□□□ 1.59
HDAC3-201ENST00000305264 C11orf65Q8NCR3 313 aa24.99■■□□□ 1.59
HDAC3-201ENST00000305264 DIO2Q92813 273 aa24.99■■□□□ 1.59
HDAC3-201ENST00000305264 TRNT1Q96Q11 434 aaKnown RBP24.99■■□□□ 1.59
HDAC3-201ENST00000305264 ADOQ96SZ5 270 aa24.99■■□□□ 1.59
HDAC3-201ENST00000305264 KCTD14Q9BQ13 255 aaPredicted RBP24.99■■□□□ 1.59
HDAC3-201ENST00000305264 ZNF350Q9GZX5 532 aa24.99■■□□□ 1.59
HDAC3-201ENST00000305264 PRPF19Q9UMS4 504 aaKnown RBP24.99■■□□□ 1.59
HDAC3-201ENST00000305264 FCMRO60667 390 aa24.98■■□□□ 1.59
HDAC3-201ENST00000305264 PPM1BO75688 479 aa24.98■■□□□ 1.59
HDAC3-201ENST00000305264 PDE5AO76074 875 aa24.98■■□□□ 1.59
HDAC3-201ENST00000305264 SORBS2O94875 1100 aaKnown RBP24.98■■□□□ 1.59
HDAC3-201ENST00000305264 IL33O95760 270 aa24.98■■□□□ 1.59
HDAC3-201ENST00000305264 F10P00742 488 aa24.98■■□□□ 1.59
HDAC3-201ENST00000305264 IL12BP29460 328 aa24.98■■□□□ 1.59
HDAC3-201ENST00000305264 FBXW4P57775 412 aa24.98■■□□□ 1.59
HDAC3-201ENST00000305264 VMACQ2NL98 169 aa24.98■■□□□ 1.59
HDAC3-201ENST00000305264 ASRGL1Q7L266 308 aa24.98■■□□□ 1.59
HDAC3-201ENST00000305264 TMEM156Q8N614 296 aa24.98■■□□□ 1.59
HDAC3-201ENST00000305264 OR5M3Q8NGP4 307 aa24.98■■□□□ 1.59
HDAC3-201ENST00000305264 SPACA9Q96E40 222 aaPredicted RBP24.98■■□□□ 1.59
HDAC3-201ENST00000305264 CNTNAP3BQ96NU0 1288 aa24.98■■□□□ 1.59
HDAC3-201ENST00000305264 CNTNAP3Q9BZ76 1288 aa24.98■■□□□ 1.59
HDAC3-201ENST00000305264 USP24Q9UPU5 2620 aa24.98■■□□□ 1.59
HDAC3-201ENST00000305264 UGT2B11O75310 529 aa24.98■■□□□ 1.59
HDAC3-201ENST00000305264 DNAJC8O75937 253 aaPredicted RBP24.98■■□□□ 1.59
HDAC3-201ENST00000305264 KRT20P35900 424 aa24.98■■□□□ 1.59
HDAC3-201ENST00000305264 CPEB4Q17RY0 729 aaKnown RBP eCLIP24.98■■□□□ 1.59
HDAC3-201ENST00000305264 ZNF630Q2M218 657 aaPredicted RBP24.98■■□□□ 1.59
HDAC3-201ENST00000305264 FRRS1Q6ZNA5 592 aa24.98■■□□□ 1.59
HDAC3-201ENST00000305264 SLC38A1Q9H2H9 487 aa24.98■■□□□ 1.59
HDAC3-201ENST00000305264 MKLN1Q9UL63 735 aa24.98■■□□□ 1.59
HDAC3-201ENST00000305264 ITPR1Q14643 2758 aa24.97■■□□□ 1.59
HDAC3-201ENST00000305264 TMEM247A6NEH6 219 aa24.97■■□□□ 1.59
HDAC3-201ENST00000305264 ERICH4A6NGS2 130 aa24.97■■□□□ 1.59
HDAC3-201ENST00000305264 GSC2O15499 205 aa24.97■■□□□ 1.59
HDAC3-201ENST00000305264 DNAJA2O60884 412 aa24.97■■□□□ 1.59
HDAC3-201ENST00000305264 PCGF2P35227 344 aa24.97■■□□□ 1.59
HDAC3-201ENST00000305264 MSX2P35548 267 aaPredicted RBP24.97■■□□□ 1.59
HDAC3-201ENST00000305264 HPCAP84074 193 aa24.97■■□□□ 1.59
HDAC3-201ENST00000305264 RBBP4Q09028 425 aa24.97■■□□□ 1.59
HDAC3-201ENST00000305264 ZNF791Q3KP31 576 aaPredicted RBP24.97■■□□□ 1.59
HDAC3-201ENST00000305264 OPN5Q6U736 354 aa24.97■■□□□ 1.59
HDAC3-201ENST00000305264 IL20RBQ6UXL0 311 aa24.97■■□□□ 1.59
HDAC3-201ENST00000305264 MICU2Q8IYU8 434 aa24.97■■□□□ 1.59
HDAC3-201ENST00000305264 TREX2Q9BQ50 279 aaPredicted RBP24.97■■□□□ 1.59
HDAC3-201ENST00000305264 G6PC3Q9BUM1 346 aa24.97■■□□□ 1.59
HDAC3-201ENST00000305264 FLRT3Q9NZU0 649 aa24.97■■□□□ 1.59
HDAC3-201ENST00000305264 TNRC6AQ8NDV7 1962 aaKnown RBP24.97■■□□□ 1.59
HDAC3-201ENST00000305264 NPIPA5A0A0B4J1W7 369 aa24.96■■□□□ 1.59
HDAC3-201ENST00000305264 NPIPA7E9PJI5 369 aa24.96■■□□□ 1.59
HDAC3-201ENST00000305264 STX11O75558 287 aa24.96■■□□□ 1.59
HDAC3-201ENST00000305264 NPIPA8P0DM63 369 aa24.96■■□□□ 1.59
HDAC3-201ENST00000305264 HSD17B1P14061 328 aa24.96■■□□□ 1.59
HDAC3-201ENST00000305264 TMED10P49755 219 aaKnown RBP24.96■■□□□ 1.59
HDAC3-201ENST00000305264 CRISP3P54108 245 aa24.96■■□□□ 1.59
HDAC3-201ENST00000305264 CHRNEQ04844 493 aa24.96■■□□□ 1.59
HDAC3-201ENST00000305264 MFAP5Q13361 173 aa24.96■■□□□ 1.59
HDAC3-201ENST00000305264 TYW3Q6IPR3 259 aaKnown RBP24.96■■□□□ 1.59
HDAC3-201ENST00000305264 COL21A1Q96P44 957 aa24.96■■□□□ 1.59
HDAC3-201ENST00000305264 PLA2G3Q9NZ20 509 aa24.96■■□□□ 1.59
HDAC3-201ENST00000305264 ABI3Q9P2A4 366 aa24.96■■□□□ 1.59
HDAC3-201ENST00000305264 MRTO4Q9UKD2 239 aaKnown RBP24.96■■□□□ 1.59
HDAC3-201ENST00000305264 WDR45Q9Y484 360 aa24.96■■□□□ 1.59
HDAC3-201ENST00000305264 ELOVL7A1L3X0 281 aa24.96■■□□□ 1.59
HDAC3-201ENST00000305264 OR6C70A6NIJ9 312 aa24.96■■□□□ 1.59
HDAC3-201ENST00000305264 C5orf58C9J3I9 102 aa24.96■■□□□ 1.59
HDAC3-201ENST00000305264 WDPCPO95876 746 aa24.96■■□□□ 1.59
HDAC3-201ENST00000305264 AQP1P29972 269 aa24.96■■□□□ 1.59
HDAC3-201ENST00000305264 PSMD4P55036 377 aaKnown RBP24.96■■□□□ 1.59
HDAC3-201ENST00000305264 NTRK2Q16620 822 aa24.96■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms