RNA–Protein interactions for RNA: ENST00000301843.12

CTTN-201, Transcript of cortactin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTTN, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-201ENST00000301843 CNRIP1Q96F85 164 aaPredicted RBP12.7□□□□□ -0.38
CTTN-201ENST00000301843 LTBP2Q14767 1821 aa12.7□□□□□ -0.38
CTTN-201ENST00000301843 NPIPA5A0A0B4J1W7 369 aa12.7□□□□□ -0.38
CTTN-201ENST00000301843 CENPBD1B2RD01 187 aa12.7□□□□□ -0.38
CTTN-201ENST00000301843 NPIPA7E9PJI5 369 aa12.7□□□□□ -0.38
CTTN-201ENST00000301843 CDC42EP2O14613 210 aa12.7□□□□□ -0.38
CTTN-201ENST00000301843 PAPLNO95428 1278 aa12.7□□□□□ -0.38
CTTN-201ENST00000301843 NPIPA8P0DM63 369 aa12.7□□□□□ -0.38
CTTN-201ENST00000301843 CSF2RAP15509 400 aa12.7□□□□□ -0.38
CTTN-201ENST00000301843 SHC1P29353 583 aa12.7□□□□□ -0.38
CTTN-201ENST00000301843 ST8SIA6P61647 398 aa12.7□□□□□ -0.38
CTTN-201ENST00000301843 BNC1Q01954 994 aa12.7□□□□□ -0.38
CTTN-201ENST00000301843 ZNF155Q12901 538 aaPredicted RBP12.7□□□□□ -0.38
CTTN-201ENST00000301843 KLHL22Q53GT1 634 aa12.7□□□□□ -0.38
CTTN-201ENST00000301843 PLBD1Q6P4A8 553 aa12.7□□□□□ -0.38
CTTN-201ENST00000301843 IKBIPQ70UQ0 350 aa12.7□□□□□ -0.38
CTTN-201ENST00000301843 OR13C5Q8NGS8 318 aa12.7□□□□□ -0.38
CTTN-201ENST00000301843 SAMD8Q96LT4 415 aa12.7□□□□□ -0.38
CTTN-201ENST00000301843 ARHGAP9Q9BRR9 750 aa12.7□□□□□ -0.38
CTTN-201ENST00000301843 HCAR1Q9BXC0 346 aa12.7□□□□□ -0.38
CTTN-201ENST00000301843 CCDC86Q9H6F5 360 aaKnown RBP12.7□□□□□ -0.38
CTTN-201ENST00000301843 POLMQ9NP87 494 aaPredicted RBP12.7□□□□□ -0.38
CTTN-201ENST00000301843 SLC35C2Q9NQQ7 365 aa12.7□□□□□ -0.38
CTTN-201ENST00000301843 RBFOX1Q9NWB1 397 aaKnown RBP12.7□□□□□ -0.38
CTTN-201ENST00000301843 ABHD14A-ACY1A0A1B0GW23 586 aa12.69□□□□□ -0.38
CTTN-201ENST00000301843 ZSCAN5BA6NJL1 495 aa12.69□□□□□ -0.38
CTTN-201ENST00000301843 PRKAR1AP10644 381 aa12.69□□□□□ -0.38
CTTN-201ENST00000301843 CPN2P22792 545 aa12.69□□□□□ -0.38
CTTN-201ENST00000301843 CERS1P27544 350 aa12.69□□□□□ -0.38
CTTN-201ENST00000301843 RFX3P48380 749 aa12.69□□□□□ -0.38
CTTN-201ENST00000301843 SRP54P61011 504 aaKnown RBP12.69□□□□□ -0.38
CTTN-201ENST00000301843 ABATP80404 500 aa12.69□□□□□ -0.38
CTTN-201ENST00000301843 ID2Q02363 134 aa12.69□□□□□ -0.38
CTTN-201ENST00000301843 C6orf132Q5T0Z8 1188 aa12.69□□□□□ -0.38
CTTN-201ENST00000301843 LAMTOR1Q6IAA8 161 aa12.69□□□□□ -0.38
CTTN-201ENST00000301843 C1orf94Q6P1W5 598 aa12.69□□□□□ -0.38
CTTN-201ENST00000301843 ARL9Q6T311 187 aa12.69□□□□□ -0.38
CTTN-201ENST00000301843 DHRS1Q96LJ7 313 aa12.69□□□□□ -0.38
CTTN-201ENST00000301843 TOX2Q96NM4 488 aa12.69□□□□□ -0.38
CTTN-201ENST00000301843 FERD3LQ96RJ6 166 aa12.69□□□□□ -0.38
CTTN-201ENST00000301843 SLC13A4Q9UKG4 626 aa12.69□□□□□ -0.38
CTTN-201ENST00000301843 ACAD8Q9UKU7 415 aa12.69□□□□□ -0.38
CTTN-201ENST00000301843 TBX21Q9UL17 535 aa12.69□□□□□ -0.38
CTTN-201ENST00000301843 MDC1Q14676 2089 aaKnown RBP12.69□□□□□ -0.38
CTTN-201ENST00000301843 IGKV1-8A0A0C4DH67 115 aa12.69□□□□□ -0.38
CTTN-201ENST00000301843 E9PI62 339 aa12.69□□□□□ -0.38
CTTN-201ENST00000301843 INMT-MINDY4F8WBC2 141 aa12.69□□□□□ -0.38
CTTN-201ENST00000301843 EEF1E1O43324 174 aaKnown RBP12.69□□□□□ -0.38
CTTN-201ENST00000301843 LGI1O95970 557 aa12.69□□□□□ -0.38
CTTN-201ENST00000301843 GYPBP06028 91 aa12.69□□□□□ -0.38
CTTN-201ENST00000301843 GABRA5P31644 462 aa12.69□□□□□ -0.38
CTTN-201ENST00000301843 MLLT3P42568 568 aaPredicted RBP12.69□□□□□ -0.38
CTTN-201ENST00000301843 GZMKP49863 264 aa12.69□□□□□ -0.38
CTTN-201ENST00000301843 CCR8P51685 355 aa12.69□□□□□ -0.38
CTTN-201ENST00000301843 SLC3A1Q07837 685 aa12.69□□□□□ -0.38
CTTN-201ENST00000301843 PCDH1Q08174 1060 aa12.69□□□□□ -0.38
CTTN-201ENST00000301843 C3orf38Q5JPI3 329 aa12.69□□□□□ -0.38
CTTN-201ENST00000301843 VASNQ6EMK4 673 aa12.69□□□□□ -0.38
CTTN-201ENST00000301843 SDE2Q6IQ49 451 aa12.69□□□□□ -0.38
CTTN-201ENST00000301843 AMIGO1Q86WK6 493 aa12.69□□□□□ -0.38
CTTN-201ENST00000301843 KLHDC8AQ8IYD2 350 aa12.69□□□□□ -0.38
CTTN-201ENST00000301843 FAM181AQ8N9Y4 354 aa12.69□□□□□ -0.38
CTTN-201ENST00000301843 OR2L2Q8NH16 312 aa12.69□□□□□ -0.38
CTTN-201ENST00000301843 UBE2E3Q969T4 207 aa12.69□□□□□ -0.38
CTTN-201ENST00000301843 ZNF222Q9UK12 451 aa12.69□□□□□ -0.38
CTTN-201ENST00000301843 CHST2Q9Y4C5 530 aa12.69□□□□□ -0.38
CTTN-201ENST00000301843 LOC105369274A0A096LPK9 316 aa12.68□□□□□ -0.38
CTTN-201ENST00000301843 A0A1W2PR48 441 aa12.68□□□□□ -0.38
CTTN-201ENST00000301843 CLUP10909 449 aa12.68□□□□□ -0.38
CTTN-201ENST00000301843 PPM1AP35813 382 aa12.68□□□□□ -0.38
CTTN-201ENST00000301843 SOX9P48436 509 aa12.68□□□□□ -0.38
CTTN-201ENST00000301843 EVX1P49640 407 aa12.68□□□□□ -0.38
CTTN-201ENST00000301843 TPBGQ13641 420 aa12.68□□□□□ -0.38
CTTN-201ENST00000301843 ARHGEF6Q15052 776 aa12.68□□□□□ -0.38
CTTN-201ENST00000301843 FCN2Q15485 313 aa12.68□□□□□ -0.38
CTTN-201ENST00000301843 FAM46CQ5VWP2 391 aa12.68□□□□□ -0.38
CTTN-201ENST00000301843 TMEM91Q6ZNR0 172 aa12.68□□□□□ -0.38
CTTN-201ENST00000301843 ELMOD2Q8IZ81 293 aa12.68□□□□□ -0.38
CTTN-201ENST00000301843 OR4N4Q8N0Y3 316 aa12.68□□□□□ -0.38
CTTN-201ENST00000301843 SAMD12Q8N8I0 201 aa12.68□□□□□ -0.38
CTTN-201ENST00000301843 OR8H1Q8NGG4 311 aa12.68□□□□□ -0.38
CTTN-201ENST00000301843 FGF11Q92914 225 aa12.68□□□□□ -0.38
CTTN-201ENST00000301843 RGMAQ96B86 450 aa12.68□□□□□ -0.38
CTTN-201ENST00000301843 PRRC1Q96M27 445 aa12.68□□□□□ -0.38
CTTN-201ENST00000301843 SLA2Q9H6Q3 261 aa12.68□□□□□ -0.38
CTTN-201ENST00000301843 HINT3Q9NQE9 182 aaKnown RBP12.68□□□□□ -0.38
CTTN-201ENST00000301843 WSB2Q9NYS7 404 aaPredicted RBP12.68□□□□□ -0.38
CTTN-201ENST00000301843 F5P12259 2224 aa12.68□□□□□ -0.38
CTTN-201ENST00000301843 COL4A3Q01955 1670 aa12.68□□□□□ -0.38
CTTN-201ENST00000301843 TRBV23OR9-2A0A075B6M9 112 aa12.68□□□□□ -0.38
CTTN-201ENST00000301843 A0A1W2PQ72 361 aa12.68□□□□□ -0.38
CTTN-201ENST00000301843 FABP7O15540 132 aa12.68□□□□□ -0.38
CTTN-201ENST00000301843 ZIC2O95409 532 aaPredicted RBP12.68□□□□□ -0.38
CTTN-201ENST00000301843 THY1P04216 161 aa12.68□□□□□ -0.38
CTTN-201ENST00000301843 GKN3PP0CG01 181 aa12.68□□□□□ -0.38
CTTN-201ENST00000301843 KELP23276 732 aa12.68□□□□□ -0.38
CTTN-201ENST00000301843 ACVR1BP36896 505 aa12.68□□□□□ -0.38
CTTN-201ENST00000301843 RPS7P62081 194 aaKnown RBP12.68□□□□□ -0.38
CTTN-201ENST00000301843 RAB40BQ12829 278 aa12.68□□□□□ -0.38
CTTN-201ENST00000301843 AGERQ15109 404 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms