RNA–Protein interactions for RNA: ENST00000299847.6

CHRFAM7A-201, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRFAM7A, Length 6,220 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-201ENST00000299847 CLCN2P51788 898 aa12.85□□□□□ -0.35
CHRFAM7A-201ENST00000299847 RPS15P62841 145 aaKnown RBP12.85□□□□□ -0.35
CHRFAM7A-201ENST00000299847 RPL13AP3Q6NVV1 102 aa12.85□□□□□ -0.35
CHRFAM7A-201ENST00000299847 LILRB2Q8N423 598 aa12.85□□□□□ -0.35
CHRFAM7A-201ENST00000299847 TCEAL4Q96EI5 215 aa12.85□□□□□ -0.35
CHRFAM7A-201ENST00000299847 CA5BQ9Y2D0 317 aa12.85□□□□□ -0.35
CHRFAM7A-201ENST00000299847 PRSS21Q9Y6M0 314 aa12.85□□□□□ -0.35
CHRFAM7A-201ENST00000299847 SH3PXD2BA1X283 911 aa12.85□□□□□ -0.35
CHRFAM7A-201ENST00000299847 RAC2P15153 192 aa12.85□□□□□ -0.35
CHRFAM7A-201ENST00000299847 PRDX3P30048 256 aaKnown RBP12.85□□□□□ -0.35
CHRFAM7A-201ENST00000299847 NTSR1P30989 418 aa12.85□□□□□ -0.35
CHRFAM7A-201ENST00000299847 HOXA11P31270 313 aaPredicted RBP12.85□□□□□ -0.35
CHRFAM7A-201ENST00000299847 TLE3Q04726 772 aa12.85□□□□□ -0.35
CHRFAM7A-201ENST00000299847 EXOSC7Q15024 291 aaKnown RBP12.85□□□□□ -0.35
CHRFAM7A-201ENST00000299847 PIWIL3Q7Z3Z3 882 aaKnown RBP12.85□□□□□ -0.35
CHRFAM7A-201ENST00000299847 CCDC28AQ8IWP9 274 aa12.85□□□□□ -0.35
CHRFAM7A-201ENST00000299847 MINDY1Q8N5J2 469 aa12.85□□□□□ -0.35
CHRFAM7A-201ENST00000299847 OR4K5Q8NGD3 323 aa12.85□□□□□ -0.35
CHRFAM7A-201ENST00000299847 OR8J1Q8NGP2 316 aa12.85□□□□□ -0.35
CHRFAM7A-201ENST00000299847 CDC6Q99741 560 aa12.85□□□□□ -0.35
CHRFAM7A-201ENST00000299847 IL23AQ9NPF7 189 aa12.85□□□□□ -0.35
CHRFAM7A-201ENST00000299847 C17orf105B2RV13 164 aa12.84□□□□□ -0.35
CHRFAM7A-201ENST00000299847 G3V2L1 256 aa12.84□□□□□ -0.35
CHRFAM7A-201ENST00000299847 CREBL2O60519 120 aaPredicted RBP12.84□□□□□ -0.35
CHRFAM7A-201ENST00000299847 LCATP04180 440 aa12.84□□□□□ -0.35
CHRFAM7A-201ENST00000299847 PSMB5P28074 263 aa12.84□□□□□ -0.35
CHRFAM7A-201ENST00000299847 PRAMEF8Q5VWM4 474 aa12.84□□□□□ -0.35
CHRFAM7A-201ENST00000299847 PRAMEF7Q5VXH5 474 aa12.84□□□□□ -0.35
CHRFAM7A-201ENST00000299847 DZANK1Q9NVP4 752 aa12.84□□□□□ -0.35
CHRFAM7A-201ENST00000299847 TRAV27A0A087WT01 109 aa12.84□□□□□ -0.35
CHRFAM7A-201ENST00000299847 A0A0A6YYC8 382 aaPredicted RBP12.84□□□□□ -0.35
CHRFAM7A-201ENST00000299847 I3L1I5 382 aaPredicted RBP12.84□□□□□ -0.35
CHRFAM7A-201ENST00000299847 PTGESO14684 152 aa12.84□□□□□ -0.35
CHRFAM7A-201ENST00000299847 B4GAT1O43505 415 aa12.84□□□□□ -0.35
CHRFAM7A-201ENST00000299847 SMAD6O43541 496 aaKnown RBP12.84□□□□□ -0.35
CHRFAM7A-201ENST00000299847 NCR1O76036 304 aa12.84□□□□□ -0.35
CHRFAM7A-201ENST00000299847 DRD2P14416 443 aa12.84□□□□□ -0.35
CHRFAM7A-201ENST00000299847 ZNF43P17038 809 aa12.84□□□□□ -0.35
CHRFAM7A-201ENST00000299847 PRKXP51817 358 aa12.84□□□□□ -0.35
CHRFAM7A-201ENST00000299847 TMEM35AQ53FP2 167 aa12.84□□□□□ -0.35
CHRFAM7A-201ENST00000299847 MEX3BQ6ZN04 569 aaKnown RBP12.84□□□□□ -0.35
CHRFAM7A-201ENST00000299847 NCCRP1Q6ZVX7 275 aaPredicted RBP12.84□□□□□ -0.35
CHRFAM7A-201ENST00000299847 HS6ST2Q96MM7 605 aa12.84□□□□□ -0.35
CHRFAM7A-201ENST00000299847 TRIB3Q96RU7 358 aa12.84□□□□□ -0.35
CHRFAM7A-201ENST00000299847 NAALAD2Q9Y3Q0 740 aa12.84□□□□□ -0.35
CHRFAM7A-201ENST00000299847 MPPED1O15442 326 aa12.84□□□□□ -0.35
CHRFAM7A-201ENST00000299847 MICAQ29983 383 aa12.84□□□□□ -0.35
CHRFAM7A-201ENST00000299847 PLEKHN1Q494U1 663 aaPredicted RBP12.84□□□□□ -0.35
CHRFAM7A-201ENST00000299847 OR5W2Q8NH69 310 aa12.84□□□□□ -0.35
CHRFAM7A-201ENST00000299847 FMN2Q9NZ56 1722 aa12.84□□□□□ -0.35
CHRFAM7A-201ENST00000299847 MS4A2Q01362 244 aa12.84□□□□□ -0.35
CHRFAM7A-201ENST00000299847 RING1Q06587 406 aa12.84□□□□□ -0.35
CHRFAM7A-201ENST00000299847 ANKRD54Q6NXT1 300 aa12.84□□□□□ -0.35
CHRFAM7A-201ENST00000299847 HSD11B1LQ7Z5J1 315 aa12.84□□□□□ -0.35
CHRFAM7A-201ENST00000299847 TMEM135Q86UB9 458 aa12.84□□□□□ -0.35
CHRFAM7A-201ENST00000299847 DCUN1D4Q92564 292 aa12.84□□□□□ -0.35
CHRFAM7A-201ENST00000299847 SULT4A1Q9BR01 284 aa12.84□□□□□ -0.35
CHRFAM7A-201ENST00000299847 ALG8Q9BVK2 526 aa12.84□□□□□ -0.35
CHRFAM7A-201ENST00000299847 TMPRSS11EQ9UL52 423 aa12.84□□□□□ -0.35
CHRFAM7A-201ENST00000299847 OXSR1O95747 527 aaPredicted RBP12.84□□□□□ -0.35
CHRFAM7A-201ENST00000299847 OR8U9P0C7N5 309 aa12.84□□□□□ -0.35
CHRFAM7A-201ENST00000299847 NFATC4Q14934 902 aa12.84□□□□□ -0.35
CHRFAM7A-201ENST00000299847 MAMDC2Q7Z304 686 aaPredicted RBP12.84□□□□□ -0.35
CHRFAM7A-201ENST00000299847 ANKRD13BQ86YJ7 626 aa12.84□□□□□ -0.35
CHRFAM7A-201ENST00000299847 MARVELD2Q8N4S9 558 aa12.84□□□□□ -0.35
CHRFAM7A-201ENST00000299847 ANKK1Q8NFD2 765 aa12.84□□□□□ -0.35
CHRFAM7A-201ENST00000299847 IER3IP1Q9Y5U9 82 aa12.84□□□□□ -0.35
CHRFAM7A-201ENST00000299847 J3KTA2 159 aa12.83□□□□□ -0.35
CHRFAM7A-201ENST00000299847 C5AR1P21730 350 aa12.83□□□□□ -0.35
CHRFAM7A-201ENST00000299847 CCNJQ5T5M9 372 aa12.83□□□□□ -0.35
CHRFAM7A-201ENST00000299847 CPOQ8IVL8 374 aa12.83□□□□□ -0.35
CHRFAM7A-201ENST00000299847 FAM3CQ92520 227 aa12.83□□□□□ -0.35
CHRFAM7A-201ENST00000299847 OR5B12Q96R08 314 aa12.83□□□□□ -0.35
CHRFAM7A-201ENST00000299847 MAGIXQ9H6Y5 334 aa12.83□□□□□ -0.35
CHRFAM7A-201ENST00000299847 H3BQ06 376 aaPredicted RBP12.83□□□□□ -0.36
CHRFAM7A-201ENST00000299847 THBS2P35442 1172 aa12.83□□□□□ -0.36
CHRFAM7A-201ENST00000299847 Q6ZSR6 202 aa12.83□□□□□ -0.36
CHRFAM7A-201ENST00000299847 ZC3H3Q8IXZ2 948 aaKnown RBP12.83□□□□□ -0.36
CHRFAM7A-201ENST00000299847 NUDT22Q9BRQ3 303 aa12.83□□□□□ -0.36
CHRFAM7A-201ENST00000299847 KCNIP1Q9NZI2 227 aa12.83□□□□□ -0.36
CHRFAM7A-201ENST00000299847 MAGED1Q9Y5V3 778 aaPredicted RBP12.83□□□□□ -0.36
CHRFAM7A-201ENST00000299847 C10orf71Q711Q0 1435 aa12.83□□□□□ -0.36
CHRFAM7A-201ENST00000299847 H0YJX3 145 aa12.83□□□□□ -0.36
CHRFAM7A-201ENST00000299847 ZNF254O75437 659 aa12.83□□□□□ -0.36
CHRFAM7A-201ENST00000299847 MPIG6BO95866 241 aa12.83□□□□□ -0.36
CHRFAM7A-201ENST00000299847 STK35Q8TDR2 534 aa12.83□□□□□ -0.36
CHRFAM7A-201ENST00000299847 MED16Q9Y2X0 877 aa12.83□□□□□ -0.36
CHRFAM7A-201ENST00000299847 ZNF142P52746 1687 aaPredicted RBP12.83□□□□□ -0.36
CHRFAM7A-201ENST00000299847 KCPQ6ZWJ8 1503 aa12.83□□□□□ -0.36
CHRFAM7A-201ENST00000299847 NALCNQ8IZF0 1738 aa12.83□□□□□ -0.36
CHRFAM7A-201ENST00000299847 FAM208AQ9UK61 1670 aaKnown RBP12.83□□□□□ -0.36
CHRFAM7A-201ENST00000299847 ZNF865P0CJ78 1059 aaPredicted RBP12.83□□□□□ -0.36
CHRFAM7A-201ENST00000299847 CHMP24386 653 aa12.83□□□□□ -0.36
CHRFAM7A-201ENST00000299847 EEF1A2Q05639 463 aaKnown RBP12.83□□□□□ -0.36
CHRFAM7A-201ENST00000299847 RELL1Q8IUW5 271 aa12.83□□□□□ -0.36
CHRFAM7A-201ENST00000299847 TMEFF1Q8IYR6 380 aa12.83□□□□□ -0.36
CHRFAM7A-201ENST00000299847 MYRFLQ96LU7 910 aa12.83□□□□□ -0.36
CHRFAM7A-201ENST00000299847 SMIM3Q9BZL3 60 aa12.83□□□□□ -0.36
CHRFAM7A-201ENST00000299847 HCSTQ9UBK5 93 aa12.83□□□□□ -0.36
CHRFAM7A-201ENST00000299847 CASC3O15234 703 aaKnown RBP12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms