RNA–Protein interactions for RNA: ENST00000298875.8

CPSF2-201, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF2, Length 13,035 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-201ENST00000298875 ZNF705GA8MUZ8 300 aaPredicted RBP5.29□□□□□ -1.56
CPSF2-201ENST00000298875 SCAMP2O15127 329 aaKnown RBP5.29□□□□□ -1.56
CPSF2-201ENST00000298875 RHCEP18577 417 aa5.29□□□□□ -1.56
CPSF2-201ENST00000298875 PITPNBP48739 271 aa5.29□□□□□ -1.56
CPSF2-201ENST00000298875 H3F3AP84243 136 aa5.29□□□□□ -1.56
CPSF2-201ENST00000298875 GSTM4Q03013 218 aa5.29□□□□□ -1.56
CPSF2-201ENST00000298875 C2orf76Q3KRA6 126 aa5.29□□□□□ -1.56
CPSF2-201ENST00000298875 TMEM35AQ53FP2 167 aa5.29□□□□□ -1.56
CPSF2-201ENST00000298875 LPCAT3Q6P1A2 487 aa5.29□□□□□ -1.56
CPSF2-201ENST00000298875 METTL2BQ6P1Q9 378 aaKnown RBP5.29□□□□□ -1.56
CPSF2-201ENST00000298875 CCBE1Q6UXH8 406 aaPredicted RBP5.29□□□□□ -1.56
CPSF2-201ENST00000298875 TPRG1Q6ZUI0 275 aa5.29□□□□□ -1.56
CPSF2-201ENST00000298875 ASPGQ86U10 573 aa5.29□□□□□ -1.56
CPSF2-201ENST00000298875 ZNF695Q8IW36 515 aa5.29□□□□□ -1.56
CPSF2-201ENST00000298875 OR56B2PQ8NGI1 322 aa5.29□□□□□ -1.56
CPSF2-201ENST00000298875 OR52P1PQ8NH57 321 aa5.29□□□□□ -1.56
CPSF2-201ENST00000298875 SCLYQ96I15 445 aa5.29□□□□□ -1.56
CPSF2-201ENST00000298875 SUSD3Q96L08 255 aa5.29□□□□□ -1.56
CPSF2-201ENST00000298875 LRR1Q96L50 414 aa5.29□□□□□ -1.56
CPSF2-201ENST00000298875 NSUN5Q96P11 429 aaKnown RBP5.29□□□□□ -1.56
CPSF2-201ENST00000298875 URM1Q9BTM9 101 aaKnown RBP5.29□□□□□ -1.56
CPSF2-201ENST00000298875 LHPPQ9H008 270 aa5.29□□□□□ -1.56
CPSF2-201ENST00000298875 MMP28Q9H239 520 aa5.29□□□□□ -1.56
CPSF2-201ENST00000298875 C2orf42Q9NWW7 574 aa5.29□□□□□ -1.56
CPSF2-201ENST00000298875 NLKQ9UBE8 527 aa5.29□□□□□ -1.56
CPSF2-201ENST00000298875 POU2F3Q9UKI9 436 aa5.29□□□□□ -1.56
CPSF2-201ENST00000298875 PCDHB3Q9Y5E6 796 aa5.29□□□□□ -1.56
CPSF2-201ENST00000298875 E9PI62 339 aa5.29□□□□□ -1.56
CPSF2-201ENST00000298875 AGPAT2O15120 278 aa5.29□□□□□ -1.56
CPSF2-201ENST00000298875 SNHG28P0DPA3 235 aa5.29□□□□□ -1.56
CPSF2-201ENST00000298875 AFF3P51826 1226 aaKnown RBP5.29□□□□□ -1.56
CPSF2-201ENST00000298875 AKR1C2P52895 323 aa5.29□□□□□ -1.56
CPSF2-201ENST00000298875 PRKCZQ05513 592 aa5.29□□□□□ -1.56
CPSF2-201ENST00000298875 TMEM41BQ5BJD5 291 aa5.29□□□□□ -1.56
CPSF2-201ENST00000298875 EOGTQ5NDL2 527 aa5.29□□□□□ -1.56
CPSF2-201ENST00000298875 RPL22L1Q6P5R6 122 aaKnown RBP5.29□□□□□ -1.56
CPSF2-201ENST00000298875 DNAJC22Q8N4W6 341 aa5.29□□□□□ -1.56
CPSF2-201ENST00000298875 TRAM1L1Q8N609 369 aa5.29□□□□□ -1.56
CPSF2-201ENST00000298875 C3orf58Q8NDZ4 430 aa5.29□□□□□ -1.56
CPSF2-201ENST00000298875 OR51T1Q8NGJ9 327 aa5.29□□□□□ -1.56
CPSF2-201ENST00000298875 SLAMF9Q96A28 289 aa5.29□□□□□ -1.56
CPSF2-201ENST00000298875 KLRG1Q96E93 195 aa5.29□□□□□ -1.56
CPSF2-201ENST00000298875 LMF1Q96S06 567 aa5.29□□□□□ -1.56
CPSF2-201ENST00000298875 ST6GALNAC4Q9H4F1 302 aa5.29□□□□□ -1.56
CPSF2-201ENST00000298875 LIN7BQ9HAP6 207 aa5.29□□□□□ -1.56
CPSF2-201ENST00000298875 PSAT1Q9Y617 370 aa5.29□□□□□ -1.56
CPSF2-201ENST00000298875 NID2Q14112 1375 aa5.28□□□□□ -1.56
CPSF2-201ENST00000298875 A6NLC8 198 aa5.28□□□□□ -1.56
CPSF2-201ENST00000298875 NRP1O14786 923 aa5.28□□□□□ -1.56
CPSF2-201ENST00000298875 EMC8O43402 210 aa5.28□□□□□ -1.56
CPSF2-201ENST00000298875 SC5DO75845 299 aa5.28□□□□□ -1.56
CPSF2-201ENST00000298875 LPLP06858 475 aa5.28□□□□□ -1.56
CPSF2-201ENST00000298875 DCNP07585 359 aaKnown RBP5.28□□□□□ -1.56
CPSF2-201ENST00000298875 PNMTP11086 282 aa5.28□□□□□ -1.56
CPSF2-201ENST00000298875 ZNF43P17038 809 aa5.28□□□□□ -1.56
CPSF2-201ENST00000298875 RELAQ04206 551 aa5.28□□□□□ -1.56
CPSF2-201ENST00000298875 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.28□□□□□ -1.56
CPSF2-201ENST00000298875 CHDHQ8NE62 594 aaPredicted RBP5.28□□□□□ -1.56
CPSF2-201ENST00000298875 OR1S1Q8NH92 325 aa5.28□□□□□ -1.56
CPSF2-201ENST00000298875 MR1Q95460 341 aa5.28□□□□□ -1.56
CPSF2-201ENST00000298875 KCTD12Q96CX2 325 aaKnown RBP5.28□□□□□ -1.56
CPSF2-201ENST00000298875 TXNDC15Q96J42 360 aa5.28□□□□□ -1.56
CPSF2-201ENST00000298875 HS6ST2Q96MM7 605 aa5.28□□□□□ -1.56
CPSF2-201ENST00000298875 ZNF317Q96PQ6 595 aaPredicted RBP5.28□□□□□ -1.56
CPSF2-201ENST00000298875 PEBP4Q96S96 227 aa5.28□□□□□ -1.56
CPSF2-201ENST00000298875 OR11A1Q9GZK7 315 aa5.28□□□□□ -1.56
CPSF2-201ENST00000298875 PCDHGA2Q9Y5H1 932 aa5.28□□□□□ -1.56
CPSF2-201ENST00000298875 CHD4Q14839 1912 aa5.28□□□□□ -1.56
CPSF2-201ENST00000298875 MRC1P22897 1456 aa5.28□□□□□ -1.56
CPSF2-201ENST00000298875 FAM227AF5H4B4 570 aa5.28□□□□□ -1.56
CPSF2-201ENST00000298875 SERPINA7P05543 415 aa5.28□□□□□ -1.56
CPSF2-201ENST00000298875 RBMS1P29558 406 aaKnown RBP5.28□□□□□ -1.56
CPSF2-201ENST00000298875 GGT2P36268 569 aa5.28□□□□□ -1.56
CPSF2-201ENST00000298875 CAV2P51636 162 aa5.28□□□□□ -1.56
CPSF2-201ENST00000298875 TAS2R20P59543 309 aa5.28□□□□□ -1.56
CPSF2-201ENST00000298875 RAET1LQ5VY80 246 aa5.28□□□□□ -1.56
CPSF2-201ENST00000298875 RHOUQ7L0Q8 258 aa5.28□□□□□ -1.56
CPSF2-201ENST00000298875 PRSS48Q7RTY5 328 aa5.28□□□□□ -1.56
CPSF2-201ENST00000298875 SIAH1Q8IUQ4 282 aa5.28□□□□□ -1.56
CPSF2-201ENST00000298875 FAXDC2Q96IV6 333 aa5.28□□□□□ -1.56
CPSF2-201ENST00000298875 MYRFLQ96LU7 910 aa5.28□□□□□ -1.56
CPSF2-201ENST00000298875 ELF4Q99607 663 aaPredicted RBP5.28□□□□□ -1.56
CPSF2-201ENST00000298875 SYNPO2LQ9H987 977 aa5.28□□□□□ -1.56
CPSF2-201ENST00000298875 WNT6Q9Y6F9 365 aa5.28□□□□□ -1.56
CPSF2-201ENST00000298875 TMEM14AQ9Y6G1 99 aa5.28□□□□□ -1.56
CPSF2-201ENST00000298875 LYRM1O43325 122 aa5.28□□□□□ -1.56
CPSF2-201ENST00000298875 FGF3P11487 239 aaPredicted RBP5.28□□□□□ -1.56
CPSF2-201ENST00000298875 RAB6AP20340 208 aa5.28□□□□□ -1.56
CPSF2-201ENST00000298875 THBS2P35442 1172 aa5.28□□□□□ -1.56
CPSF2-201ENST00000298875 ZNF136P52737 540 aa5.28□□□□□ -1.56
CPSF2-201ENST00000298875 ZXDBP98169 803 aa5.28□□□□□ -1.56
CPSF2-201ENST00000298875 SERINC3Q13530 473 aa5.28□□□□□ -1.56
CPSF2-201ENST00000298875 COL9A3Q14050 684 aaPredicted RBP5.28□□□□□ -1.56
CPSF2-201ENST00000298875 HNF4GQ14541 408 aa5.28□□□□□ -1.56
CPSF2-201ENST00000298875 OR4K13Q8NH42 304 aa5.28□□□□□ -1.56
CPSF2-201ENST00000298875 MAL2Q969L2 176 aa5.28□□□□□ -1.56
CPSF2-201ENST00000298875 LDHAL6BQ9BYZ2 381 aaPredicted RBP5.28□□□□□ -1.56
CPSF2-201ENST00000298875 POPDC3Q9HBV1 291 aa5.28□□□□□ -1.56
CPSF2-201ENST00000298875 ASB3Q9Y575 518 aa5.28□□□□□ -1.56
CPSF2-201ENST00000298875 SOWAHBA6NEL2 793 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 173.7 ms