RNA–Protein interactions for RNA: ENST00000297423.8

SPIDR-201, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPIDR, Length 3,988 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-201ENST00000297423 ZNF33BQ06732 778 aa13.99□□□□□ -0.17
SPIDR-201ENST00000297423 SYPL1Q16563 259 aa13.99□□□□□ -0.17
SPIDR-201ENST00000297423 SLC36A4Q6YBV0 504 aa13.99□□□□□ -0.17
SPIDR-201ENST00000297423 TRAPPC5Q8IUR0 188 aa13.99□□□□□ -0.17
SPIDR-201ENST00000297423 ZNF740Q8NDX6 193 aa13.99□□□□□ -0.17
SPIDR-201ENST00000297423 TNFAIP8L1Q8WVP5 186 aa13.99□□□□□ -0.17
SPIDR-201ENST00000297423 MYLIPQ8WY64 445 aa13.99□□□□□ -0.17
SPIDR-201ENST00000297423 FANCFQ9NPI8 374 aa13.99□□□□□ -0.17
SPIDR-201ENST00000297423 TAS2R3Q9NYW6 316 aa13.99□□□□□ -0.17
SPIDR-201ENST00000297423 BTNL2Q9UIR0 455 aa13.99□□□□□ -0.17
SPIDR-201ENST00000297423 ELF5Q9UKW6 265 aaPredicted RBP13.99□□□□□ -0.17
SPIDR-201ENST00000297423 PLAGL1Q9UM63 463 aa13.99□□□□□ -0.17
SPIDR-201ENST00000297423 EDARQ9UNE0 448 aa13.99□□□□□ -0.17
SPIDR-201ENST00000297423 FRMPD3Q5JV73 1810 aa13.99□□□□□ -0.17
SPIDR-201ENST00000297423 CCL16O15467 120 aa13.98□□□□□ -0.17
SPIDR-201ENST00000297423 TGM5O43548 720 aa13.98□□□□□ -0.17
SPIDR-201ENST00000297423 MMP20O60882 483 aa13.98□□□□□ -0.17
SPIDR-201ENST00000297423 KLHL18O94889 574 aa13.98□□□□□ -0.17
SPIDR-201ENST00000297423 RECQLP46063 649 aaPredicted RBP13.98□□□□□ -0.17
SPIDR-201ENST00000297423 ZNF628Q5EBL2 1059 aa13.98□□□□□ -0.17
SPIDR-201ENST00000297423 PLBD1Q6P4A8 553 aa13.98□□□□□ -0.17
SPIDR-201ENST00000297423 LRRN1Q6UXK5 716 aa13.98□□□□□ -0.17
SPIDR-201ENST00000297423 LRRTM4Q86VH4 590 aa13.98□□□□□ -0.17
SPIDR-201ENST00000297423 OR10H1Q9Y4A9 318 aa13.98□□□□□ -0.17
SPIDR-201ENST00000297423 DRGXA6NNA5 263 aa13.98□□□□□ -0.17
SPIDR-201ENST00000297423 CBX7O95931 251 aa13.98□□□□□ -0.17
SPIDR-201ENST00000297423 C8GP07360 202 aa13.98□□□□□ -0.17
SPIDR-201ENST00000297423 CFL1P23528 166 aaKnown RBP13.98□□□□□ -0.17
SPIDR-201ENST00000297423 AHRP35869 848 aa13.98□□□□□ -0.17
SPIDR-201ENST00000297423 GBX2P52951 348 aaPredicted RBP13.98□□□□□ -0.17
SPIDR-201ENST00000297423 FAM198BQ6UWH4 519 aa13.98□□□□□ -0.17
SPIDR-201ENST00000297423 NLRC3Q7RTR2 1065 aa13.98□□□□□ -0.17
SPIDR-201ENST00000297423 MS4A3Q96HJ5 214 aa13.98□□□□□ -0.17
SPIDR-201ENST00000297423 TRMT61BQ9BVS5 477 aaKnown RBP13.98□□□□□ -0.17
SPIDR-201ENST00000297423 KCNN2Q9H2S1 579 aa13.98□□□□□ -0.17
SPIDR-201ENST00000297423 ZDHHC3Q9NYG2 299 aa13.98□□□□□ -0.17
SPIDR-201ENST00000297423 FBXW2Q9UKT8 454 aa13.98□□□□□ -0.17
SPIDR-201ENST00000297423 C8orf89P0DMQ9 161 aa13.98□□□□□ -0.17
SPIDR-201ENST00000297423 GNSP15586 552 aa13.98□□□□□ -0.17
SPIDR-201ENST00000297423 ST3GAL2Q16842 350 aa13.98□□□□□ -0.17
SPIDR-201ENST00000297423 TRMT2BQ96GJ1 504 aaKnown RBP13.98□□□□□ -0.17
SPIDR-201ENST00000297423 OSGEPL1Q9H4B0 414 aa13.98□□□□□ -0.17
SPIDR-201ENST00000297423 ZCCHC3Q9NUD5 404 aaKnown RBP13.98□□□□□ -0.17
SPIDR-201ENST00000297423 PHF11Q9UIL8 331 aa13.98□□□□□ -0.17
SPIDR-201ENST00000297423 TANC1Q9C0D5 1861 aa13.98□□□□□ -0.17
SPIDR-201ENST00000297423 NPIPB15A6NHN6 443 aaPredicted RBP13.98□□□□□ -0.17
SPIDR-201ENST00000297423 GPR171O14626 319 aa13.98□□□□□ -0.17
SPIDR-201ENST00000297423 CHST10O43529 356 aa13.98□□□□□ -0.17
SPIDR-201ENST00000297423 SCN2BO60939 215 aa13.98□□□□□ -0.17
SPIDR-201ENST00000297423 B3GALNT1O75752 331 aa13.98□□□□□ -0.17
SPIDR-201ENST00000297423 RB1P06400 928 aa13.98□□□□□ -0.17
SPIDR-201ENST00000297423 CD22P20273 847 aa13.98□□□□□ -0.17
SPIDR-201ENST00000297423 MMP11P24347 488 aa13.98□□□□□ -0.17
SPIDR-201ENST00000297423 BEX5Q5H9J7 111 aa13.98□□□□□ -0.17
SPIDR-201ENST00000297423 OR4C15Q8NGM1 316 aa13.98□□□□□ -0.17
SPIDR-201ENST00000297423 C2CD4CQ8TF44 421 aa13.98□□□□□ -0.17
SPIDR-201ENST00000297423 SLC38A5Q8WUX1 472 aa13.98□□□□□ -0.17
SPIDR-201ENST00000297423 MSLNLQ96KJ4 702 aa13.98□□□□□ -0.17
SPIDR-201ENST00000297423 BBS4Q96RK4 519 aa13.98□□□□□ -0.17
SPIDR-201ENST00000297423 AK6Q9Y3D8 172 aaKnown RBP13.98□□□□□ -0.17
SPIDR-201ENST00000297423 LINC00862A6NCI5 91 aa13.97□□□□□ -0.17
SPIDR-201ENST00000297423 PPM1BO75688 479 aa13.97□□□□□ -0.17
SPIDR-201ENST00000297423 SLC2A10O95528 541 aa13.97□□□□□ -0.17
SPIDR-201ENST00000297423 IGLV3-27P01718 113 aa13.97□□□□□ -0.17
SPIDR-201ENST00000297423 PTHLHP12272 177 aa13.97□□□□□ -0.17
SPIDR-201ENST00000297423 RAB3BP20337 219 aa13.97□□□□□ -0.17
SPIDR-201ENST00000297423 SMIM11AP58511 58 aa13.97□□□□□ -0.17
SPIDR-201ENST00000297423 STXBP1P61764 594 aaKnown RBP13.97□□□□□ -0.17
SPIDR-201ENST00000297423 ILKQ13418 452 aa13.97□□□□□ -0.17
SPIDR-201ENST00000297423 DUSP6Q16828 381 aa13.97□□□□□ -0.17
SPIDR-201ENST00000297423 ARHGAP15Q53QZ3 475 aa13.97□□□□□ -0.17
SPIDR-201ENST00000297423 MLIPQ5VWP3 458 aa13.97□□□□□ -0.17
SPIDR-201ENST00000297423 PGBD2Q6P3X8 592 aa13.97□□□□□ -0.17
SPIDR-201ENST00000297423 GPALPP1Q8IXQ4 340 aa13.97□□□□□ -0.17
SPIDR-201ENST00000297423 APCDD1Q8J025 514 aa13.97□□□□□ -0.17
SPIDR-201ENST00000297423 ZFP82Q8N141 532 aa13.97□□□□□ -0.17
SPIDR-201ENST00000297423 ZNF454Q8N9F8 522 aa13.97□□□□□ -0.17
SPIDR-201ENST00000297423 NEIL2Q969S2 332 aa13.97□□□□□ -0.17
SPIDR-201ENST00000297423 RAD51AP1Q96B01 352 aa13.97□□□□□ -0.17
SPIDR-201ENST00000297423 SENP5Q96HI0 755 aaPredicted RBP13.97□□□□□ -0.17
SPIDR-201ENST00000297423 RBP7Q96R05 134 aa13.97□□□□□ -0.17
SPIDR-201ENST00000297423 GDF15Q99988 308 aa13.97□□□□□ -0.17
SPIDR-201ENST00000297423 SLC6A16Q9GZN6 736 aa13.97□□□□□ -0.17
SPIDR-201ENST00000297423 RCE1Q9Y256 329 aa13.97□□□□□ -0.17
SPIDR-201ENST00000297423 TSC2P49815 1807 aa13.97□□□□□ -0.17
SPIDR-201ENST00000297423 IGLV3-10A0A075B6K4 115 aa13.97□□□□□ -0.17
SPIDR-201ENST00000297423 FAAHO00519 579 aa13.97□□□□□ -0.17
SPIDR-201ENST00000297423 MAGEB4O15481 346 aaPredicted RBP13.97□□□□□ -0.17
SPIDR-201ENST00000297423 SLC19A2O60779 497 aa13.97□□□□□ -0.17
SPIDR-201ENST00000297423 GABRA5P31644 462 aa13.97□□□□□ -0.17
SPIDR-201ENST00000297423 SLC1A3P43003 542 aa13.97□□□□□ -0.17
SPIDR-201ENST00000297423 PUM1Q14671 1186 aaKnown RBP eCLIP13.97□□□□□ -0.17
SPIDR-201ENST00000297423 TCTN3Q6NUS6 607 aa13.97□□□□□ -0.17
SPIDR-201ENST00000297423 RPTNQ6XPR3 784 aa13.97□□□□□ -0.17
SPIDR-201ENST00000297423 CPOQ8IVL8 374 aa13.97□□□□□ -0.17
SPIDR-201ENST00000297423 CFAP206Q8IYR0 622 aa13.97□□□□□ -0.17
SPIDR-201ENST00000297423 BBS1Q8NFJ9 593 aa13.97□□□□□ -0.17
SPIDR-201ENST00000297423 OR51L1Q8NGJ5 315 aa13.97□□□□□ -0.17
SPIDR-201ENST00000297423 ORAI1Q96D31 301 aa13.97□□□□□ -0.17
SPIDR-201ENST00000297423 SAMD11Q96NU1 681 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms