RNA–Protein interactions for RNA: ENST00000292808.5

ABCF3-201, Transcript of ATP binding cassette subfamily F member 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene ABCF3, Length 2,453 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-201ENST00000292808 STX19Q8N4C7 294 aa13.11□□□□□ -0.31
ABCF3-201ENST00000292808 ZG16BQ96DA0 208 aa13.11□□□□□ -0.31
ABCF3-201ENST00000292808 ZHX1-C8orf76Q96EF9 292 aa13.11□□□□□ -0.31
ABCF3-201ENST00000292808 TCTN2Q96GX1 697 aa13.11□□□□□ -0.31
ABCF3-201ENST00000292808 CNOT2Q9NZN8 540 aaKnown RBP13.11□□□□□ -0.31
ABCF3-201ENST00000292808 REV1Q9UBZ9 1251 aa13.11□□□□□ -0.31
ABCF3-201ENST00000292808 ACAD8Q9UKU7 415 aa13.11□□□□□ -0.31
ABCF3-201ENST00000292808 MGAT4BQ9UQ53 548 aa13.11□□□□□ -0.31
ABCF3-201ENST00000292808 CHST2Q9Y4C5 530 aa13.11□□□□□ -0.31
ABCF3-201ENST00000292808 ARID1BQ8NFD5 2236 aaPredicted RBP13.11□□□□□ -0.31
ABCF3-201ENST00000292808 ASXL3Q9C0F0 2248 aa13.11□□□□□ -0.31
ABCF3-201ENST00000292808 A0A0G2JPF8 293 aa13.11□□□□□ -0.31
ABCF3-201ENST00000292808 EFCAB10A6NFE3 127 aa13.11□□□□□ -0.31
ABCF3-201ENST00000292808 HNRNPCL2B2RXH8 293 aa13.11□□□□□ -0.31
ABCF3-201ENST00000292808 HNRNPCL3B7ZW38 293 aa13.11□□□□□ -0.31
ABCF3-201ENST00000292808 H3BN98 237 aa13.11□□□□□ -0.31
ABCF3-201ENST00000292808 KPNA4O00629 521 aaPredicted RBP13.11□□□□□ -0.31
ABCF3-201ENST00000292808 CHST10O43529 356 aa13.11□□□□□ -0.31
ABCF3-201ENST00000292808 AIREO43918 545 aa13.11□□□□□ -0.31
ABCF3-201ENST00000292808 GPR75O95800 540 aa13.11□□□□□ -0.31
ABCF3-201ENST00000292808 LGI1O95970 557 aa13.11□□□□□ -0.31
ABCF3-201ENST00000292808 HNRNPCL4P0DMR1 293 aa13.11□□□□□ -0.31
ABCF3-201ENST00000292808 ACP2P11117 423 aa13.11□□□□□ -0.31
ABCF3-201ENST00000292808 OSMP13725 252 aa13.11□□□□□ -0.31
ABCF3-201ENST00000292808 SMIM11AP58511 58 aa13.11□□□□□ -0.31
ABCF3-201ENST00000292808 LSM11P83369 360 aaKnown RBP eCLIP13.11□□□□□ -0.31
ABCF3-201ENST00000292808 ST3GAL4Q11206 333 aa13.11□□□□□ -0.31
ABCF3-201ENST00000292808 ILKQ13418 452 aa13.11□□□□□ -0.31
ABCF3-201ENST00000292808 PGBD2Q6P3X8 592 aa13.11□□□□□ -0.31
ABCF3-201ENST00000292808 SDR16C5Q8N3Y7 309 aa13.11□□□□□ -0.31
ABCF3-201ENST00000292808 ZNF675Q8TD23 568 aa13.11□□□□□ -0.31
ABCF3-201ENST00000292808 IL4I1Q96RQ9 567 aa13.11□□□□□ -0.31
ABCF3-201ENST00000292808 CDCA4Q9BXL8 241 aa13.11□□□□□ -0.31
ABCF3-201ENST00000292808 MROQ9BYG7 248 aa13.11□□□□□ -0.31
ABCF3-201ENST00000292808 GIN1Q9NXP7 522 aa13.11□□□□□ -0.31
ABCF3-201ENST00000292808 NDOR1Q9UHB4 597 aa13.11□□□□□ -0.31
ABCF3-201ENST00000292808 TGFBR3LH3BV60 316 aa13.1□□□□□ -0.31
ABCF3-201ENST00000292808 FRS3O43559 492 aa13.1□□□□□ -0.31
ABCF3-201ENST00000292808 SRPX2O60687 465 aaPredicted RBP13.1□□□□□ -0.31
ABCF3-201ENST00000292808 CT62P0C5K7 136 aa13.1□□□□□ -0.31
ABCF3-201ENST00000292808 MYF5P13349 255 aa13.1□□□□□ -0.31
ABCF3-201ENST00000292808 FNTBP49356 437 aa13.1□□□□□ -0.31
ABCF3-201ENST00000292808 CLK1P49759 484 aaKnown RBP13.1□□□□□ -0.31
ABCF3-201ENST00000292808 CFHR1Q03591 330 aa13.1□□□□□ -0.31
ABCF3-201ENST00000292808 ZNF311Q5JNZ3 666 aa13.1□□□□□ -0.31
ABCF3-201ENST00000292808 WDR45BQ5MNZ6 344 aa13.1□□□□□ -0.31
ABCF3-201ENST00000292808 PRAMEF8Q5VWM4 474 aa13.1□□□□□ -0.31
ABCF3-201ENST00000292808 PRAMEF7Q5VXH5 474 aa13.1□□□□□ -0.31
ABCF3-201ENST00000292808 CDC73Q6P1J9 531 aa13.1□□□□□ -0.31
ABCF3-201ENST00000292808 C16orf62Q7Z3J2 963 aa13.1□□□□□ -0.31
ABCF3-201ENST00000292808 VRK2Q86Y07 508 aa13.1□□□□□ -0.31
ABCF3-201ENST00000292808 CDS1Q92903 461 aa13.1□□□□□ -0.31
ABCF3-201ENST00000292808 FUZQ9BT04 418 aa13.1□□□□□ -0.31
ABCF3-201ENST00000292808 RBCK1Q9BYM8 510 aa13.1□□□□□ -0.31
ABCF3-201ENST00000292808 POLR2J3Q9H1A7 115 aaKnown RBP13.1□□□□□ -0.31
ABCF3-201ENST00000292808 DCSTAMPQ9H295 470 aa13.1□□□□□ -0.31
ABCF3-201ENST00000292808 MAT2BQ9NZL9 334 aa13.1□□□□□ -0.31
ABCF3-201ENST00000292808 PTGFRNQ9P2B2 879 aa13.1□□□□□ -0.31
ABCF3-201ENST00000292808 C19orf53Q9UNZ5 99 aaPredicted RBP13.1□□□□□ -0.31
ABCF3-201ENST00000292808 A3GALT2U3KPV4 340 aa13.1□□□□□ -0.31
ABCF3-201ENST00000292808 CACNA1EQ15878 2313 aa13.1□□□□□ -0.31
ABCF3-201ENST00000292808 TLCD2A6NGC4 264 aa13.1□□□□□ -0.31
ABCF3-201ENST00000292808 FCMRO60667 390 aa13.1□□□□□ -0.31
ABCF3-201ENST00000292808 ADORA3P0DMS8 318 aa13.1□□□□□ -0.31
ABCF3-201ENST00000292808 TDGF1P13385 188 aa13.1□□□□□ -0.31
ABCF3-201ENST00000292808 PDX1P52945 283 aa13.1□□□□□ -0.31
ABCF3-201ENST00000292808 OR1D5P58170 312 aa13.1□□□□□ -0.31
ABCF3-201ENST00000292808 ATP1A4Q13733 1029 aa13.1□□□□□ -0.31
ABCF3-201ENST00000292808 DUSP5Q16690 384 aa13.1□□□□□ -0.31
ABCF3-201ENST00000292808 PRICKLE4Q2TBC4 344 aa13.1□□□□□ -0.31
ABCF3-201ENST00000292808 NIPAL1Q6NVV3 410 aa13.1□□□□□ -0.31
ABCF3-201ENST00000292808 BTLAQ7Z6A9 289 aa13.1□□□□□ -0.31
ABCF3-201ENST00000292808 SLC35F3Q8IY50 421 aa13.1□□□□□ -0.31
ABCF3-201ENST00000292808 B3GNT7Q8NFL0 401 aa13.1□□□□□ -0.31
ABCF3-201ENST00000292808 ADAMTS15Q8TE58 950 aa13.1□□□□□ -0.31
ABCF3-201ENST00000292808 SNRNP27Q8WVK2 155 aaKnown RBP13.1□□□□□ -0.31
ABCF3-201ENST00000292808 TRNT1Q96Q11 434 aaKnown RBP13.1□□□□□ -0.31
ABCF3-201ENST00000292808 RAB33BQ9H082 229 aa13.1□□□□□ -0.31
ABCF3-201ENST00000292808 ARMC7Q9H6L4 198 aa13.1□□□□□ -0.31
ABCF3-201ENST00000292808 CLN6Q9NWW5 311 aa13.1□□□□□ -0.31
ABCF3-201ENST00000292808 HCN3Q9P1Z3 774 aa13.1□□□□□ -0.31
ABCF3-201ENST00000292808 FUOMA2VDF0 154 aa13.09□□□□□ -0.31
ABCF3-201ENST00000292808 ALPPP05187 535 aa13.09□□□□□ -0.31
ABCF3-201ENST00000292808 HNRNPCP07910 306 aaKnown RBP eCLIP13.09□□□□□ -0.31
ABCF3-201ENST00000292808 BMP4P12644 408 aa13.09□□□□□ -0.31
ABCF3-201ENST00000292808 TNNI3P19429 210 aa13.09□□□□□ -0.31
ABCF3-201ENST00000292808 SLC15A1P46059 708 aa13.09□□□□□ -0.31
ABCF3-201ENST00000292808 LIMK1P53667 647 aa13.09□□□□□ -0.31
ABCF3-201ENST00000292808 EPHA4P54764 986 aa13.09□□□□□ -0.31
ABCF3-201ENST00000292808 SNRPGP62308 76 aaKnown RBP13.09□□□□□ -0.31
ABCF3-201ENST00000292808 MAT1AQ00266 395 aaKnown RBP13.09□□□□□ -0.31
ABCF3-201ENST00000292808 DUSP8Q13202 625 aa13.09□□□□□ -0.31
ABCF3-201ENST00000292808 OXA1LQ15070 435 aa13.09□□□□□ -0.31
ABCF3-201ENST00000292808 INAQ16352 499 aa13.09□□□□□ -0.31
ABCF3-201ENST00000292808 FAM214AQ32MH5 1076 aa13.09□□□□□ -0.31
ABCF3-201ENST00000292808 ATAD3BQ5T9A4 648 aa13.09□□□□□ -0.31
ABCF3-201ENST00000292808 MAMSTRQ6ZN01 415 aa13.09□□□□□ -0.31
ABCF3-201ENST00000292808 MEX3DQ86XN8 651 aaKnown RBP13.09□□□□□ -0.31
ABCF3-201ENST00000292808 MINDY2Q8NBR6 621 aa13.09□□□□□ -0.31
ABCF3-201ENST00000292808 SLC9A6Q92581 669 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms