RNA–Protein interactions for RNA: ENST00000292510.5

VPS28-201, Transcript of VPS28, ESCRT-I subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS28, Length 979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-201ENST00000292510 INPP5KQ9BT40 448 aa12.23□□□□□ -0.45
VPS28-201ENST00000292510 ZNF703Q9H7S9 590 aaPredicted RBP12.23□□□□□ -0.45
VPS28-201ENST00000292510 ZDHHC11Q9H8X9 412 aa12.23□□□□□ -0.45
VPS28-201ENST00000292510 FBXO34Q9NWN3 711 aa12.23□□□□□ -0.45
VPS28-201ENST00000292510 FAM120CQ9NX05 1096 aaKnown RBP12.23□□□□□ -0.45
VPS28-201ENST00000292510 ZIM2Q9NZV7 527 aa12.23□□□□□ -0.45
VPS28-201ENST00000292510 SH3BGRL2Q9UJC5 107 aa12.23□□□□□ -0.45
VPS28-201ENST00000292510 BOKQ9UMX3 212 aaPredicted RBP12.23□□□□□ -0.45
VPS28-201ENST00000292510 PCDHGB4Q9UN71 923 aa12.23□□□□□ -0.45
VPS28-201ENST00000292510 KCNE3Q9Y6H6 103 aa12.23□□□□□ -0.45
VPS28-201ENST00000292510 A0A0G2JND7 137 aa12.22□□□□□ -0.45
VPS28-201ENST00000292510 A0A1B0GTH9 108 aa12.22□□□□□ -0.45
VPS28-201ENST00000292510 TTC36A6NLP5 189 aa12.22□□□□□ -0.45
VPS28-201ENST00000292510 KCNK2O95069 426 aa12.22□□□□□ -0.45
VPS28-201ENST00000292510 SNX4O95219 450 aa12.22□□□□□ -0.45
VPS28-201ENST00000292510 KCNH1O95259 989 aa12.22□□□□□ -0.45
VPS28-201ENST00000292510 CDKN2CP42773 168 aa12.22□□□□□ -0.45
VPS28-201ENST00000292510 POLR2JP52435 117 aaKnown RBP12.22□□□□□ -0.45
VPS28-201ENST00000292510 HYAL4Q2M3T9 481 aa12.22□□□□□ -0.45
VPS28-201ENST00000292510 C1QL3Q5VWW1 255 aa12.22□□□□□ -0.45
VPS28-201ENST00000292510 SLC30A6Q6NXT4 461 aa12.22□□□□□ -0.45
VPS28-201ENST00000292510 CDC73Q6P1J9 531 aa12.22□□□□□ -0.45
VPS28-201ENST00000292510 TMEM81Q6P7N7 255 aa12.22□□□□□ -0.45
VPS28-201ENST00000292510 ZCCHC12Q6PEW1 402 aa12.22□□□□□ -0.45
VPS28-201ENST00000292510 ANGPTL8Q6UXH0 198 aa12.22□□□□□ -0.45
VPS28-201ENST00000292510 C6orf120Q7Z4R8 191 aa12.22□□□□□ -0.45
VPS28-201ENST00000292510 PACS2Q86VP3 889 aa12.22□□□□□ -0.45
VPS28-201ENST00000292510 MIER2Q8N344 545 aa12.22□□□□□ -0.45
VPS28-201ENST00000292510 FAM109AQ8N4B1 249 aa12.22□□□□□ -0.45
VPS28-201ENST00000292510 GLB1L3Q8NCI6 653 aaPredicted RBP12.22□□□□□ -0.45
VPS28-201ENST00000292510 VPS37AQ8NEZ2 397 aa12.22□□□□□ -0.45
VPS28-201ENST00000292510 OR5D16Q8NGK9 328 aa12.22□□□□□ -0.45
VPS28-201ENST00000292510 VPS33AQ96AX1 596 aa12.22□□□□□ -0.45
VPS28-201ENST00000292510 MOAP1Q96BY2 351 aa12.22□□□□□ -0.45
VPS28-201ENST00000292510 CCDC115Q96NT0 180 aa12.22□□□□□ -0.45
VPS28-201ENST00000292510 ACTRT3Q9BYD9 372 aa12.22□□□□□ -0.45
VPS28-201ENST00000292510 SERHL2Q9H4I8 314 aa12.22□□□□□ -0.45
VPS28-201ENST00000292510 PLSCR2Q9NRY7 297 aa12.22□□□□□ -0.45
VPS28-201ENST00000292510 FGFR1OP2Q9NVK5 253 aa12.22□□□□□ -0.45
VPS28-201ENST00000292510 BTNL2Q9UIR0 455 aa12.22□□□□□ -0.45
VPS28-201ENST00000292510 ZNF407Q9C0G0 2248 aa12.21□□□□□ -0.45
VPS28-201ENST00000292510 B4DXG7 233 aa12.21□□□□□ -0.45
VPS28-201ENST00000292510 SCO2O43819 266 aa12.21□□□□□ -0.45
VPS28-201ENST00000292510 SLC19A2O60779 497 aa12.21□□□□□ -0.45
VPS28-201ENST00000292510 UTS2O95399 124 aa12.21□□□□□ -0.45
VPS28-201ENST00000292510 GSNP06396 782 aa12.21□□□□□ -0.45
VPS28-201ENST00000292510 VIMP08670 466 aaKnown RBP12.21□□□□□ -0.45
VPS28-201ENST00000292510 CD1EP15812 388 aa12.21□□□□□ -0.45
VPS28-201ENST00000292510 MATN1P21941 496 aa12.21□□□□□ -0.45
VPS28-201ENST00000292510 UQCRC2P22695 453 aa12.21□□□□□ -0.45
VPS28-201ENST00000292510 GDF1P27539 372 aa12.21□□□□□ -0.45
VPS28-201ENST00000292510 EVI2BP34910 448 aa12.21□□□□□ -0.45
VPS28-201ENST00000292510 TRPC1P48995 793 aa12.21□□□□□ -0.45
VPS28-201ENST00000292510 MAN2A2P49641 1150 aa12.21□□□□□ -0.45
VPS28-201ENST00000292510 STX1BP61266 288 aa12.21□□□□□ -0.45
VPS28-201ENST00000292510 POU6F2P78424 691 aaPredicted RBP12.21□□□□□ -0.45
VPS28-201ENST00000292510 RBPJQ06330 500 aa12.21□□□□□ -0.45
VPS28-201ENST00000292510 SNTA1Q13424 505 aa12.21□□□□□ -0.45
VPS28-201ENST00000292510 SLC10A1Q14973 349 aa12.21□□□□□ -0.45
VPS28-201ENST00000292510 C3AR1Q16581 482 aa12.21□□□□□ -0.45
VPS28-201ENST00000292510 GRAMD1BQ3KR37 738 aa12.21□□□□□ -0.45
VPS28-201ENST00000292510 TIGD2Q4W5G0 525 aa12.21□□□□□ -0.45
VPS28-201ENST00000292510 TIGD3Q6B0B8 471 aa12.21□□□□□ -0.45
VPS28-201ENST00000292510 OR5M10Q6IEU7 315 aa12.21□□□□□ -0.45
VPS28-201ENST00000292510 CGB2Q6NT52 195 aa12.21□□□□□ -0.45
VPS28-201ENST00000292510 DNAJC14Q6Y2X3 702 aaPredicted RBP12.21□□□□□ -0.45
VPS28-201ENST00000292510 BNC2Q6ZN30 1099 aaPredicted RBP12.21□□□□□ -0.45
VPS28-201ENST00000292510 SPPL2CQ8IUH8 684 aa12.21□□□□□ -0.45
VPS28-201ENST00000292510 WDSUB1Q8N9V3 476 aa12.21□□□□□ -0.45
VPS28-201ENST00000292510 FAM110BQ8TC76 370 aa12.21□□□□□ -0.45
VPS28-201ENST00000292510 ADAMTS15Q8TE58 950 aa12.21□□□□□ -0.45
VPS28-201ENST00000292510 RNF138Q8WVD3 245 aa12.21□□□□□ -0.45
VPS28-201ENST00000292510 TMEM41AQ96HV5 264 aa12.21□□□□□ -0.45
VPS28-201ENST00000292510 SLC35G5Q96KT7 338 aa12.21□□□□□ -0.45
VPS28-201ENST00000292510 OR7D2Q96RA2 312 aa12.21□□□□□ -0.45
VPS28-201ENST00000292510 PANX1Q96RD7 426 aa12.21□□□□□ -0.45
VPS28-201ENST00000292510 STACQ99469 402 aa12.21□□□□□ -0.45
VPS28-201ENST00000292510 SLC35A5Q9BS91 424 aa12.21□□□□□ -0.45
VPS28-201ENST00000292510 RTN4RQ9BZR6 473 aa12.21□□□□□ -0.45
VPS28-201ENST00000292510 SLC6A15Q9H2J7 730 aa12.21□□□□□ -0.45
VPS28-201ENST00000292510 PIGUQ9H490 435 aa12.21□□□□□ -0.45
VPS28-201ENST00000292510 SERHLQ9NQF3 203 aa12.21□□□□□ -0.45
VPS28-201ENST00000292510 DUSP22Q9NRW4 184 aa12.21□□□□□ -0.45
VPS28-201ENST00000292510 TNFRSF10DQ9UBN6 386 aa12.21□□□□□ -0.45
VPS28-201ENST00000292510 ERRFI1Q9UJM3 462 aaPredicted RBP12.21□□□□□ -0.45
VPS28-201ENST00000292510 MRTO4Q9UKD2 239 aaKnown RBP12.21□□□□□ -0.45
VPS28-201ENST00000292510 FAF1Q9UNN5 650 aaPredicted RBP12.21□□□□□ -0.45
VPS28-201ENST00000292510 C15orf41Q9Y2V0 281 aa12.21□□□□□ -0.45
VPS28-201ENST00000292510 WIF1Q9Y5W5 379 aa12.21□□□□□ -0.45
VPS28-201ENST00000292510 NCKAP5O14513 1909 aa12.21□□□□□ -0.46
VPS28-201ENST00000292510 TRGV8A0A0C4DH27 118 aa12.2□□□□□ -0.46
VPS28-201ENST00000292510 FAM234BA2RU67 622 aa12.2□□□□□ -0.46
VPS28-201ENST00000292510 CLEC18AA5D8T8 446 aa12.2□□□□□ -0.46
VPS28-201ENST00000292510 ADAM10O14672 748 aa12.2□□□□□ -0.46
VPS28-201ENST00000292510 SNPHO15079 494 aa12.2□□□□□ -0.46
VPS28-201ENST00000292510 LRRTM2O43300 516 aa12.2□□□□□ -0.46
VPS28-201ENST00000292510 FADS1O60427 444 aa12.2□□□□□ -0.46
VPS28-201ENST00000292510 TRAPPC6AO75865 159 aa12.2□□□□□ -0.46
VPS28-201ENST00000292510 IGHG3P01860 377 aa12.2□□□□□ -0.46
VPS28-201ENST00000292510 IL6P05231 212 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms