RNA–Protein interactions for RNA: ENST00000289547.8

NPC1L1-201, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 5,048 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-201ENST00000289547 PRRG4Q9BZD6 226 aa10.77□□□□□ -0.69
NPC1L1-201ENST00000289547 LHX3Q9UBR4 397 aa10.77□□□□□ -0.69
NPC1L1-201ENST00000289547 PCDHGB2Q9Y5G2 931 aa10.77□□□□□ -0.69
NPC1L1-201ENST00000289547 PRSS38A1L453 326 aa10.76□□□□□ -0.69
NPC1L1-201ENST00000289547 PSMD9O00233 223 aa10.76□□□□□ -0.69
NPC1L1-201ENST00000289547 C6orf47O95873 294 aa10.76□□□□□ -0.69
NPC1L1-201ENST00000289547 CXCR4P61073 352 aa10.76□□□□□ -0.69
NPC1L1-201ENST00000289547 PTCHD3Q3KNS1 767 aa10.76□□□□□ -0.69
NPC1L1-201ENST00000289547 TCTE1Q5JU00 501 aa10.76□□□□□ -0.69
NPC1L1-201ENST00000289547 ZNF691Q5VV52 312 aa10.76□□□□□ -0.69
NPC1L1-201ENST00000289547 SPRED1Q7Z699 444 aa10.76□□□□□ -0.69
NPC1L1-201ENST00000289547 RNF130Q86XS8 419 aa10.76□□□□□ -0.69
NPC1L1-201ENST00000289547 ARHGAP12Q8IWW6 846 aa10.76□□□□□ -0.69
NPC1L1-201ENST00000289547 ACOT12Q8WYK0 555 aa10.76□□□□□ -0.69
NPC1L1-201ENST00000289547 RTP4Q96DX8 246 aa10.76□□□□□ -0.69
NPC1L1-201ENST00000289547 CMKLR1Q99788 373 aa10.76□□□□□ -0.69
NPC1L1-201ENST00000289547 TIMM29Q9BSF4 260 aa10.76□□□□□ -0.69
NPC1L1-201ENST00000289547 PCED1AQ9H1Q7 454 aa10.76□□□□□ -0.69
NPC1L1-201ENST00000289547 LYARQ9NX58 379 aaKnown RBP10.76□□□□□ -0.69
NPC1L1-201ENST00000289547 NPAP1Q9NZP6 1156 aa10.76□□□□□ -0.69
NPC1L1-201ENST00000289547 P2RX2Q9UBL9 471 aa10.76□□□□□ -0.69
NPC1L1-201ENST00000289547 IGLV3-10A0A075B6K4 115 aa10.76□□□□□ -0.69
NPC1L1-201ENST00000289547 WASHC1A8K0Z3 465 aa10.76□□□□□ -0.69
NPC1L1-201ENST00000289547 XKRYO14609 159 aa10.76□□□□□ -0.69
NPC1L1-201ENST00000289547 GBAP04062 536 aa10.76□□□□□ -0.69
NPC1L1-201ENST00000289547 RGS19P49795 217 aa10.76□□□□□ -0.69
NPC1L1-201ENST00000289547 KHKP50053 298 aa10.76□□□□□ -0.69
NPC1L1-201ENST00000289547 CLVS2Q5SYC1 327 aa10.76□□□□□ -0.69
NPC1L1-201ENST00000289547 USP53Q70EK8 1073 aa10.76□□□□□ -0.69
NPC1L1-201ENST00000289547 KLBQ86Z14 1044 aa10.76□□□□□ -0.69
NPC1L1-201ENST00000289547 FBXL6Q8N531 539 aa10.76□□□□□ -0.69
NPC1L1-201ENST00000289547 OR2L5Q8NG80 312 aa10.76□□□□□ -0.69
NPC1L1-201ENST00000289547 OR7G2Q8NG99 324 aa10.76□□□□□ -0.69
NPC1L1-201ENST00000289547 SLC35B4Q969S0 331 aa10.76□□□□□ -0.69
NPC1L1-201ENST00000289547 ARPC5LQ9BPX5 153 aa10.76□□□□□ -0.69
NPC1L1-201ENST00000289547 ZNF416Q9BWM5 594 aa10.76□□□□□ -0.69
NPC1L1-201ENST00000289547 SCP2D1Q9UJQ7 156 aa10.76□□□□□ -0.69
NPC1L1-201ENST00000289547 SSX5O60225 188 aa10.76□□□□□ -0.69
NPC1L1-201ENST00000289547 HEXBP07686 556 aa10.76□□□□□ -0.69
NPC1L1-201ENST00000289547 MAOBP27338 520 aa10.76□□□□□ -0.69
NPC1L1-201ENST00000289547 CCR5P51681 352 aa10.76□□□□□ -0.69
NPC1L1-201ENST00000289547 CDKN2DP55273 166 aa10.76□□□□□ -0.69
NPC1L1-201ENST00000289547 VSX2P58304 361 aaPredicted RBP10.76□□□□□ -0.69
NPC1L1-201ENST00000289547 GALNT1Q10472 559 aaPredicted RBP10.76□□□□□ -0.69
NPC1L1-201ENST00000289547 ABRAXAS2Q15018 415 aa10.76□□□□□ -0.69
NPC1L1-201ENST00000289547 ADPRMQ3LIE5 342 aa10.76□□□□□ -0.69
NPC1L1-201ENST00000289547 SLC27A4Q6P1M0 643 aa10.76□□□□□ -0.69
NPC1L1-201ENST00000289547 TMEM185AQ8NFB2 350 aa10.76□□□□□ -0.69
NPC1L1-201ENST00000289547 DGAT2Q96PD7 388 aa10.76□□□□□ -0.69
NPC1L1-201ENST00000289547 C14orf105Q9NVL8 296 aa10.76□□□□□ -0.69
NPC1L1-201ENST00000289547 GSKIPQ9P0R6 139 aa10.76□□□□□ -0.69
NPC1L1-201ENST00000289547 A0A0G2JN53 185 aa10.76□□□□□ -0.69
NPC1L1-201ENST00000289547 STMND1H3BQB6 276 aa10.76□□□□□ -0.69
NPC1L1-201ENST00000289547 H3BSH0 61 aa10.76□□□□□ -0.69
NPC1L1-201ENST00000289547 M0R129 80 aa10.76□□□□□ -0.69
NPC1L1-201ENST00000289547 UBFD1O14562 309 aaKnown RBP10.76□□□□□ -0.69
NPC1L1-201ENST00000289547 GABARAPO95166 117 aa10.76□□□□□ -0.69
NPC1L1-201ENST00000289547 IL12BP29460 328 aa10.76□□□□□ -0.69
NPC1L1-201ENST00000289547 IGFALSP35858 605 aa10.76□□□□□ -0.69
NPC1L1-201ENST00000289547 MC2RQ01718 297 aa10.76□□□□□ -0.69
NPC1L1-201ENST00000289547 REEP3Q6NUK4 255 aa10.76□□□□□ -0.69
NPC1L1-201ENST00000289547 ISCA2Q86U28 154 aa10.76□□□□□ -0.69
NPC1L1-201ENST00000289547 RAB8BQ92930 207 aa10.76□□□□□ -0.69
NPC1L1-201ENST00000289547 ARRDC3Q96B67 414 aa10.76□□□□□ -0.69
NPC1L1-201ENST00000289547 WASH6PQ9NQA3 447 aa10.76□□□□□ -0.69
NPC1L1-201ENST00000289547 PRDM9Q9NQV7 894 aa10.76□□□□□ -0.69
NPC1L1-201ENST00000289547 RBM7Q9Y580 266 aaKnown RBP10.76□□□□□ -0.69
NPC1L1-201ENST00000289547 A8MUA0 341 aa10.75□□□□□ -0.69
NPC1L1-201ENST00000289547 AGTR1P30556 359 aa10.75□□□□□ -0.69
NPC1L1-201ENST00000289547 LACC1Q8IV20 430 aa10.75□□□□□ -0.69
NPC1L1-201ENST00000289547 MCEMP1Q8IX19 187 aa10.75□□□□□ -0.69
NPC1L1-201ENST00000289547 GTPBP8Q8N3Z3 284 aaPredicted RBP10.75□□□□□ -0.69
NPC1L1-201ENST00000289547 BEST4Q8NFU0 473 aa10.75□□□□□ -0.69
NPC1L1-201ENST00000289547 GAL3ST4Q96RP7 486 aa10.75□□□□□ -0.69
NPC1L1-201ENST00000289547 MCM3APO60318 1980 aa10.75□□□□□ -0.69
NPC1L1-201ENST00000289547 A6NCN8 305 aa10.75□□□□□ -0.69
NPC1L1-201ENST00000289547 ERI3O43414 337 aaKnown RBP10.75□□□□□ -0.69
NPC1L1-201ENST00000289547 SULT1C4O75897 302 aa10.75□□□□□ -0.69
NPC1L1-201ENST00000289547 S1PR4O95977 384 aa10.75□□□□□ -0.69
NPC1L1-201ENST00000289547 ZNF35P13682 527 aa10.75□□□□□ -0.69
NPC1L1-201ENST00000289547 GTF2F2P13984 249 aa10.75□□□□□ -0.69
NPC1L1-201ENST00000289547 MAP3K8P41279 467 aa10.75□□□□□ -0.69
NPC1L1-201ENST00000289547 RPL34P49207 117 aaKnown RBP10.75□□□□□ -0.69
NPC1L1-201ENST00000289547 HTR6P50406 440 aa10.75□□□□□ -0.69
NPC1L1-201ENST00000289547 FXYD6P3P58550 94 aa10.75□□□□□ -0.69
NPC1L1-201ENST00000289547 TAS2R43P59537 309 aa10.75□□□□□ -0.69
NPC1L1-201ENST00000289547 OC90Q02509 493 aaPredicted RBP10.75□□□□□ -0.69
NPC1L1-201ENST00000289547 TMEM52BQ4KMG9 183 aa10.75□□□□□ -0.69
NPC1L1-201ENST00000289547 SLC22A10Q63ZE4 541 aa10.75□□□□□ -0.69
NPC1L1-201ENST00000289547 NOXRED1Q6NXP6 359 aa10.75□□□□□ -0.69
NPC1L1-201ENST00000289547 POMZP3Q6PJE2 187 aa10.75□□□□□ -0.69
NPC1L1-201ENST00000289547 MAVSQ7Z434 540 aa10.75□□□□□ -0.69
NPC1L1-201ENST00000289547 ACVR1CQ8NER5 493 aa10.75□□□□□ -0.69
NPC1L1-201ENST00000289547 OR10H5Q8NGA6 315 aa10.75□□□□□ -0.69
NPC1L1-201ENST00000289547 GSTO2Q9H4Y5 243 aa10.75□□□□□ -0.69
NPC1L1-201ENST00000289547 VAPAQ9P0L0 249 aa10.75□□□□□ -0.69
NPC1L1-201ENST00000289547 CROCCQ5TZA2 2017 aa10.75□□□□□ -0.69
NPC1L1-201ENST00000289547 PCDHGA12O60330 932 aa10.75□□□□□ -0.69
NPC1L1-201ENST00000289547 VNN2O95498 520 aa10.75□□□□□ -0.69
NPC1L1-201ENST00000289547 CDK1P06493 297 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms