RNA–Protein interactions for RNA: ENST00000288344.14

HMGN1-201, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 1,303 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-201ENST00000288344 PAIP2Q9BPZ3 127 aaKnown RBP8.37□□□□□ -1.07
HMGN1-201ENST00000288344 GSX2Q9BZM3 304 aa8.37□□□□□ -1.07
HMGN1-201ENST00000288344 BHLHE41Q9C0J9 482 aaPredicted RBP8.37□□□□□ -1.07
HMGN1-201ENST00000288344 SERHL2Q9H4I8 314 aa8.37□□□□□ -1.07
HMGN1-201ENST00000288344 ZNF703Q9H7S9 590 aaPredicted RBP8.37□□□□□ -1.07
HMGN1-201ENST00000288344 CXorf36Q9H7Y0 433 aa8.37□□□□□ -1.07
HMGN1-201ENST00000288344 ZFP64Q9NPA5 681 aa8.37□□□□□ -1.07
HMGN1-201ENST00000288344 PFDN4Q9NQP4 134 aa8.37□□□□□ -1.07
HMGN1-201ENST00000288344 AIG1Q9NVV5 245 aa8.37□□□□□ -1.07
HMGN1-201ENST00000288344 QPCTLQ9NXS2 382 aa8.37□□□□□ -1.07
HMGN1-201ENST00000288344 FLRT3Q9NZU0 649 aa8.37□□□□□ -1.07
HMGN1-201ENST00000288344 SH3BP4Q9P0V3 963 aa8.37□□□□□ -1.07
HMGN1-201ENST00000288344 OSGIN2Q9Y236 505 aa8.37□□□□□ -1.07
HMGN1-201ENST00000288344 SLC5A6Q9Y289 635 aa8.37□□□□□ -1.07
HMGN1-201ENST00000288344 LIPGQ9Y5X9 500 aa8.37□□□□□ -1.07
HMGN1-201ENST00000288344 A0A1B0GTH9 108 aa8.36□□□□□ -1.07
HMGN1-201ENST00000288344 A0A1W2PRB8 838 aa8.36□□□□□ -1.07
HMGN1-201ENST00000288344 GXYLT2A0PJZ3 443 aa8.36□□□□□ -1.07
HMGN1-201ENST00000288344 TTC36A6NLP5 189 aa8.36□□□□□ -1.07
HMGN1-201ENST00000288344 CYSRT1A8MQ03 144 aa8.36□□□□□ -1.07
HMGN1-201ENST00000288344 C17orf51A8MQB3 221 aa8.36□□□□□ -1.07
HMGN1-201ENST00000288344 CAPN14A8MX76 684 aa8.36□□□□□ -1.07
HMGN1-201ENST00000288344 NPIPB9F8W1W9 429 aa8.36□□□□□ -1.07
HMGN1-201ENST00000288344 SLCO1B7G3V0H7 640 aa8.36□□□□□ -1.07
HMGN1-201ENST00000288344 RNASET2O00584 256 aaKnown RBP8.36□□□□□ -1.07
HMGN1-201ENST00000288344 LRRTM2O43300 516 aa8.36□□□□□ -1.07
HMGN1-201ENST00000288344 EMC8O43402 210 aa8.36□□□□□ -1.07
HMGN1-201ENST00000288344 IL33O95760 270 aa8.36□□□□□ -1.07
HMGN1-201ENST00000288344 P04436 131 aa8.36□□□□□ -1.07
HMGN1-201ENST00000288344 HPNP05981 417 aa8.36□□□□□ -1.07
HMGN1-201ENST00000288344 FAM157BP0CG42 384 aa8.36□□□□□ -1.07
HMGN1-201ENST00000288344 ACP2P11117 423 aa8.36□□□□□ -1.07
HMGN1-201ENST00000288344 CD1EP15812 388 aa8.36□□□□□ -1.07
HMGN1-201ENST00000288344 EFNA1P20827 205 aaPredicted RBP8.36□□□□□ -1.07
HMGN1-201ENST00000288344 EPHA3P29320 983 aa8.36□□□□□ -1.07
HMGN1-201ENST00000288344 PTPN6P29350 595 aa8.36□□□□□ -1.07
HMGN1-201ENST00000288344 MAGEA5P43359 124 aa8.36□□□□□ -1.07
HMGN1-201ENST00000288344 MANFP55145 182 aaKnown RBP8.36□□□□□ -1.07
HMGN1-201ENST00000288344 UFM1P61960 85 aa8.36□□□□□ -1.07
HMGN1-201ENST00000288344 PPP2R2AP63151 447 aa8.36□□□□□ -1.07
HMGN1-201ENST00000288344 PSPHP78330 225 aa8.36□□□□□ -1.07
HMGN1-201ENST00000288344 ADORA2A-AS1P86434 159 aa8.36□□□□□ -1.07
HMGN1-201ENST00000288344 TNP2Q05952 138 aa8.36□□□□□ -1.07
HMGN1-201ENST00000288344 MAD2L1Q13257 205 aaPredicted RBP8.36□□□□□ -1.07
HMGN1-201ENST00000288344 CDSNQ15517 529 aa8.36□□□□□ -1.07
HMGN1-201ENST00000288344 NNATQ16517 81 aa8.36□□□□□ -1.07
HMGN1-201ENST00000288344 C3AR1Q16581 482 aa8.36□□□□□ -1.07
HMGN1-201ENST00000288344 CPTPQ5TA50 214 aa8.36□□□□□ -1.07
HMGN1-201ENST00000288344 PRAMEF20Q5VT98 475 aa8.36□□□□□ -1.07
HMGN1-201ENST00000288344 ATG16L1Q676U5 607 aa8.36□□□□□ -1.07
HMGN1-201ENST00000288344 MFSD12Q6NUT3 480 aa8.36□□□□□ -1.07
HMGN1-201ENST00000288344 SLC30A6Q6NXT4 461 aa8.36□□□□□ -1.07
HMGN1-201ENST00000288344 GK5Q6ZS86 529 aa8.36□□□□□ -1.07
HMGN1-201ENST00000288344 FAM47EQ6ZV65 393 aa8.36□□□□□ -1.07
HMGN1-201ENST00000288344 WDR53Q7Z5U6 358 aaPredicted RBP8.36□□□□□ -1.07
HMGN1-201ENST00000288344 ZAR1Q86SH2 424 aa8.36□□□□□ -1.07
HMGN1-201ENST00000288344 TRIM42Q8IWZ5 723 aa8.36□□□□□ -1.07
HMGN1-201ENST00000288344 GHDCQ8N2G8 530 aa8.36□□□□□ -1.07
HMGN1-201ENST00000288344 FAM109AQ8N4B1 249 aa8.36□□□□□ -1.07
HMGN1-201ENST00000288344 MARVELD2Q8N4S9 558 aa8.36□□□□□ -1.07
HMGN1-201ENST00000288344 ACBD4Q8NC06 268 aa8.36□□□□□ -1.07
HMGN1-201ENST00000288344 FAM98AQ8NCA5 519 aaKnown RBP8.36□□□□□ -1.07
HMGN1-201ENST00000288344 PPP1R14CQ8TAE6 165 aa8.36□□□□□ -1.07
HMGN1-201ENST00000288344 STON2Q8WXE9 905 aa8.36□□□□□ -1.07
HMGN1-201ENST00000288344 PPP1R36Q96LQ0 422 aa8.36□□□□□ -1.07
HMGN1-201ENST00000288344 RILPQ96NA2 401 aa8.36□□□□□ -1.07
HMGN1-201ENST00000288344 COL21A1Q96P44 957 aa8.36□□□□□ -1.07
HMGN1-201ENST00000288344 GNRHR2Q96P88 292 aa8.36□□□□□ -1.07
HMGN1-201ENST00000288344 ADOQ96SZ5 270 aa8.36□□□□□ -1.07
HMGN1-201ENST00000288344 DEFB127Q9H1M4 99 aa8.36□□□□□ -1.07
HMGN1-201ENST00000288344 SERHLQ9NQF3 203 aa8.36□□□□□ -1.07
HMGN1-201ENST00000288344 SDR39U1Q9NRG7 319 aaPredicted RBP8.36□□□□□ -1.07
HMGN1-201ENST00000288344 GIMAP4Q9NUV9 329 aa8.36□□□□□ -1.07
HMGN1-201ENST00000288344 FBXO34Q9NWN3 711 aa8.36□□□□□ -1.07
HMGN1-201ENST00000288344 NKIRAS1Q9NYS0 192 aa8.36□□□□□ -1.07
HMGN1-201ENST00000288344 EIF3LQ9Y262 564 aaKnown RBP8.36□□□□□ -1.07
HMGN1-201ENST00000288344 MRPS18CQ9Y3D5 142 aaKnown RBP8.36□□□□□ -1.07
HMGN1-201ENST00000288344 KCNE3Q9Y6H6 103 aa8.36□□□□□ -1.07
HMGN1-201ENST00000288344 CSMD2Q7Z408 3487 aa8.35□□□□□ -1.07
HMGN1-201ENST00000288344 IGLV3-32A0A0A0MS00 114 aa8.35□□□□□ -1.07
HMGN1-201ENST00000288344 PRAMEF27A3QJZ7 478 aa8.35□□□□□ -1.07
HMGN1-201ENST00000288344 AQP7O14520 342 aa8.35□□□□□ -1.07
HMGN1-201ENST00000288344 TP53I11O14683 189 aa8.35□□□□□ -1.07
HMGN1-201ENST00000288344 EREGO14944 169 aa8.35□□□□□ -1.07
HMGN1-201ENST00000288344 WIPF1O43516 503 aa8.35□□□□□ -1.07
HMGN1-201ENST00000288344 ZIC3O60481 467 aa8.35□□□□□ -1.07
HMGN1-201ENST00000288344 HCN1O60741 890 aa8.35□□□□□ -1.07
HMGN1-201ENST00000288344 COQ9O75208 318 aa8.35□□□□□ -1.07
HMGN1-201ENST00000288344 CLDN1O95832 211 aa8.35□□□□□ -1.07
HMGN1-201ENST00000288344 C6orf47O95873 294 aa8.35□□□□□ -1.07
HMGN1-201ENST00000288344 HMGN2P05204 90 aaKnown RBP8.35□□□□□ -1.07
HMGN1-201ENST00000288344 UQCRHP07919 91 aa8.35□□□□□ -1.07
HMGN1-201ENST00000288344 NGFRP08138 427 aa8.35□□□□□ -1.07
HMGN1-201ENST00000288344 CYP4B1P13584 511 aa8.35□□□□□ -1.07
HMGN1-201ENST00000288344 HOXB9P17482 250 aaPredicted RBP8.35□□□□□ -1.07
HMGN1-201ENST00000288344 NTSP30990 170 aa8.35□□□□□ -1.07
HMGN1-201ENST00000288344 GABRA3P34903 492 aa8.35□□□□□ -1.07
HMGN1-201ENST00000288344 RPL3P39023 403 aaKnown RBP8.35□□□□□ -1.07
HMGN1-201ENST00000288344 NRG3P56975 720 aa8.35□□□□□ -1.07
HMGN1-201ENST00000288344 MRPS22P82650 360 aaKnown RBP8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 274.6 ms