RNA–Protein interactions for RNA: ENST00000270061.11

SSBP4-201, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP4, Length 1,768 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-201ENST00000270061 SVOPLQ8N434 492 aa22.84■■□□□ 1.25
SSBP4-201ENST00000270061 MAGED4Q96JG8 741 aa22.84■■□□□ 1.25
SSBP4-201ENST00000270061 C7orf34Q96L11 122 aa22.84■■□□□ 1.25
SSBP4-201ENST00000270061 PTGFRNQ9P2B2 879 aa22.84■■□□□ 1.25
SSBP4-201ENST00000270061 PCDHGB7Q9Y5F8 929 aa22.84■■□□□ 1.25
SSBP4-201ENST00000270061 AP4B1Q9Y6B7 739 aa22.84■■□□□ 1.25
SSBP4-201ENST00000270061 ASNA1O43681 348 aa22.84■■□□□ 1.25
SSBP4-201ENST00000270061 FGF17O60258 216 aa22.84■■□□□ 1.25
SSBP4-201ENST00000270061 OR12D1P0DN82 309 aa22.84■■□□□ 1.25
SSBP4-201ENST00000270061 RNH1P13489 461 aaKnown RBP22.84■■□□□ 1.25
SSBP4-201ENST00000270061 PPP2R1BP30154 601 aa22.84■■□□□ 1.25
SSBP4-201ENST00000270061 AVPR1BP47901 424 aa22.84■■□□□ 1.25
SSBP4-201ENST00000270061 LTB4RQ15722 352 aa22.84■■□□□ 1.25
SSBP4-201ENST00000270061 SZRD1Q7Z422 152 aa22.84■■□□□ 1.25
SSBP4-201ENST00000270061 OR4N5Q8IXE1 308 aa22.84■■□□□ 1.25
SSBP4-201ENST00000270061 LGI4Q8N135 537 aa22.84■■□□□ 1.25
SSBP4-201ENST00000270061 RAB8BQ92930 207 aa22.84■■□□□ 1.25
SSBP4-201ENST00000270061 TMEM19Q96HH6 336 aa22.84■■□□□ 1.25
SSBP4-201ENST00000270061 TPD52L3Q96J77 140 aa22.84■■□□□ 1.25
SSBP4-201ENST00000270061 NUDT9Q9BW91 350 aa22.84■■□□□ 1.25
SSBP4-201ENST00000270061 HS3ST3B1Q9Y662 390 aa22.84■■□□□ 1.25
SSBP4-201ENST00000270061 GIMAP1-GIMAP5A0A087WTJ2 511 aa22.83■■□□□ 1.24
SSBP4-201ENST00000270061 FAM227AF5H4B4 570 aa22.83■■□□□ 1.24
SSBP4-201ENST00000270061 H0YIG0 161 aa22.83■■□□□ 1.24
SSBP4-201ENST00000270061 GNGT2O14610 69 aa22.83■■□□□ 1.24
SSBP4-201ENST00000270061 PDE9AO76083 593 aa22.83■■□□□ 1.24
SSBP4-201ENST00000270061 PGM3O95394 542 aa22.83■■□□□ 1.24
SSBP4-201ENST00000270061 BCHEP06276 602 aa22.83■■□□□ 1.24
SSBP4-201ENST00000270061 PTGER1P34995 402 aa22.83■■□□□ 1.24
SSBP4-201ENST00000270061 PRKAG1P54619 331 aa22.83■■□□□ 1.24
SSBP4-201ENST00000270061 LASP1Q14847 261 aaKnown RBP22.83■■□□□ 1.24
SSBP4-201ENST00000270061 IQCCQ4KMZ1 466 aa22.83■■□□□ 1.24
SSBP4-201ENST00000270061 OR2L13Q8N349 312 aa22.83■■□□□ 1.24
SSBP4-201ENST00000270061 ANKRD9Q96BM1 317 aaPredicted RBP22.83■■□□□ 1.24
SSBP4-201ENST00000270061 GIMAP5Q96F15 307 aa22.83■■□□□ 1.24
SSBP4-201ENST00000270061 SCN2AQ99250 2005 aa22.82■■□□□ 1.24
SSBP4-201ENST00000270061 PYCARD-AS1I3L0S3 204 aa22.82■■□□□ 1.24
SSBP4-201ENST00000270061 SOCS6O14544 535 aa22.82■■□□□ 1.24
SSBP4-201ENST00000270061 VLDLRP98155 873 aa22.82■■□□□ 1.24
SSBP4-201ENST00000270061 TLE1Q04724 770 aa22.82■■□□□ 1.24
SSBP4-201ENST00000270061 RAPSNQ13702 412 aa22.82■■□□□ 1.24
SSBP4-201ENST00000270061 ZNF628Q5EBL2 1059 aa22.82■■□□□ 1.24
SSBP4-201ENST00000270061 NHSL2Q5HYW2 709 aa22.82■■□□□ 1.24
SSBP4-201ENST00000270061 OR2T5Q6IEZ7 315 aa22.82■■□□□ 1.24
SSBP4-201ENST00000270061 KIRREL2Q6UWL6 708 aa22.82■■□□□ 1.24
SSBP4-201ENST00000270061 ZDHHC13Q8IUH4 622 aa22.82■■□□□ 1.24
SSBP4-201ENST00000270061 ARMC8Q8IUR7 673 aa22.82■■□□□ 1.24
SSBP4-201ENST00000270061 GALNT16Q8N428 558 aa22.82■■□□□ 1.24
SSBP4-201ENST00000270061 MARVELD2Q8N4S9 558 aa22.82■■□□□ 1.24
SSBP4-201ENST00000270061 OR7G2Q8NG99 324 aa22.82■■□□□ 1.24
SSBP4-201ENST00000270061 OR2T29Q8NH02 315 aa22.82■■□□□ 1.24
SSBP4-201ENST00000270061 KAT2AQ92830 837 aa22.82■■□□□ 1.24
SSBP4-201ENST00000270061 BCL2L10Q9HD36 194 aa22.82■■□□□ 1.24
SSBP4-201ENST00000270061 MKKSQ9NPJ1 570 aaPredicted RBP22.82■■□□□ 1.24
SSBP4-201ENST00000270061 ATP13A2Q9NQ11 1180 aa22.82■■□□□ 1.24
SSBP4-201ENST00000270061 C14orf105Q9NVL8 296 aa22.82■■□□□ 1.24
SSBP4-201ENST00000270061 C3orf18Q9UK00 162 aa22.82■■□□□ 1.24
SSBP4-201ENST00000270061 FBXL4Q9UKA2 621 aa22.82■■□□□ 1.24
SSBP4-201ENST00000270061 BAG5Q9UL15 447 aa22.82■■□□□ 1.24
SSBP4-201ENST00000270061 A0A087WV62 115 aa22.81■■□□□ 1.24
SSBP4-201ENST00000270061 PRAMEF27A3QJZ7 478 aa22.81■■□□□ 1.24
SSBP4-201ENST00000270061 DLGAP1O14490 977 aa22.81■■□□□ 1.24
SSBP4-201ENST00000270061 EI24O14681 340 aa22.81■■□□□ 1.24
SSBP4-201ENST00000270061 LDB3O75112 727 aa22.81■■□□□ 1.24
SSBP4-201ENST00000270061 MAN2A2P49641 1150 aa22.81■■□□□ 1.24
SSBP4-201ENST00000270061 GNA13Q14344 377 aa22.81■■□□□ 1.24
SSBP4-201ENST00000270061 IFI44LQ53G44 452 aa22.81■■□□□ 1.24
SSBP4-201ENST00000270061 COLEC12Q5KU26 742 aa22.81■■□□□ 1.24
SSBP4-201ENST00000270061 PRAMEF8Q5VWM4 474 aa22.81■■□□□ 1.24
SSBP4-201ENST00000270061 PRAMEF7Q5VXH5 474 aa22.81■■□□□ 1.24
SSBP4-201ENST00000270061 ZNF595Q8IYB9 648 aa22.81■■□□□ 1.24
SSBP4-201ENST00000270061 SHISA5Q8N114 240 aa22.81■■□□□ 1.24
SSBP4-201ENST00000270061 OR5D16Q8NGK9 328 aa22.81■■□□□ 1.24
SSBP4-201ENST00000270061 OR5K1Q8NHB7 308 aa22.81■■□□□ 1.24
SSBP4-201ENST00000270061 ZNF675Q8TD23 568 aa22.81■■□□□ 1.24
SSBP4-201ENST00000270061 XAGE5Q8WWM1 108 aa22.81■■□□□ 1.24
SSBP4-201ENST00000270061 ACTRT3Q9BYD9 372 aa22.81■■□□□ 1.24
SSBP4-201ENST00000270061 ABCG2Q9UNQ0 655 aa22.81■■□□□ 1.24
SSBP4-201ENST00000270061 MRPS33Q9Y291 106 aaKnown RBP22.81■■□□□ 1.24
SSBP4-201ENST00000270061 G3V2T6 193 aa22.81■■□□□ 1.24
SSBP4-201ENST00000270061 AIMP2Q13155 320 aaKnown RBP22.81■■□□□ 1.24
SSBP4-201ENST00000270061 TBPL2Q6SJ96 375 aa22.81■■□□□ 1.24
SSBP4-201ENST00000270061 LAPTM4BQ86VI4 370 aa22.81■■□□□ 1.24
SSBP4-201ENST00000270061 MS4A4EQ96PG1 132 aa22.81■■□□□ 1.24
SSBP4-201ENST00000270061 DDX18Q9NVP1 670 aaKnown RBP22.81■■□□□ 1.24
SSBP4-201ENST00000270061 MASP2O00187 686 aa22.8■■□□□ 1.24
SSBP4-201ENST00000270061 PLOD3O60568 738 aa22.8■■□□□ 1.24
SSBP4-201ENST00000270061 BMP10O95393 424 aa22.8■■□□□ 1.24
SSBP4-201ENST00000270061 HPRP00739 348 aa22.8■■□□□ 1.24
SSBP4-201ENST00000270061 OPN1SWP03999 348 aa22.8■■□□□ 1.24
SSBP4-201ENST00000270061 SLC35E2P0CK97 266 aa22.8■■□□□ 1.24
SSBP4-201ENST00000270061 SOX18P35713 384 aa22.8■■□□□ 1.24
SSBP4-201ENST00000270061 SYT16Q17RD7 645 aa22.8■■□□□ 1.24
SSBP4-201ENST00000270061 FHL5Q5TD97 284 aa22.8■■□□□ 1.24
SSBP4-201ENST00000270061 C16orf58Q96GQ5 468 aa22.8■■□□□ 1.24
SSBP4-201ENST00000270061 ZNF607Q96SK3 696 aa22.8■■□□□ 1.24
SSBP4-201ENST00000270061 SMAD5Q99717 465 aaKnown RBP22.8■■□□□ 1.24
SSBP4-201ENST00000270061 TGIF2Q9GZN2 237 aa22.8■■□□□ 1.24
SSBP4-201ENST00000270061 C19orf53Q9UNZ5 99 aaPredicted RBP22.8■■□□□ 1.24
SSBP4-201ENST00000270061 DUXAA6NLW8 204 aa22.79■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms